Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 1.5e-84 316.2 167 100.0
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 3.8e-72 275.0 165 86.7
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 1.7e-56 223.0 155 76.8
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 9.3e-55 217.2 171 70.8
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 8.7e-53 210.7 172 70.3
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 1.2e-49 200.3 168 67.9
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 4.5e-49 198.4 164 68.9
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 1.0e-48 197.2 166 70.5
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 1.2e-46 190.3 167 64.1
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 2.7e-46 189.1 167 64.1
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 4.6e-38 161.8 116 73.3
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 7.9e-38 161.0 171 57.9
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 1.0e-37 160.6 164 59.8
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 1.8e-37 159.8 102 77.5
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 1.8e-37 159.8 102 77.5
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 2.3e-37 159.5 99 79.8
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 3.0e-37 159.1 174 56.9
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 3.0e-37 159.1 137 63.5
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 3.0e-37 159.1 99 78.8
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 6.7e-37 157.9 99 79.8
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 6.7e-37 157.9 95 80.0
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 8.8e-37 157.5 104 76.0
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 1.5e-36 156.8 106 73.6
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 1.5e-36 156.8 166 54.8
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 1.9e-36 156.4 99 76.8
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 2.5e-36 156.0 102 75.5
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 2.5e-36 156.0 102 75.5
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 3.3e-36 155.6 165 56.4
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 4.3e-36 155.2 96 80.2
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 7.4e-36 154.5 95 78.9
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 9.7e-36 154.1 151 57.6
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 1.3e-35 153.7 102 76.5
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 1.7e-35 153.3 96 79.2
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 2.2e-35 152.9 135 63.0
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 3.7e-35 152.1 96 79.2
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 6.3e-35 151.4 96 79.2
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 8.2e-35 151.0 96 78.1
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 8.2e-35 151.0 96 78.1
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 8.2e-35 151.0 96 78.1
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 8.2e-35 151.0 97 76.3
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 8.2e-35 151.0 161 55.9
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 1.4e-34 150.2 97 76.3
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 1.4e-34 150.2 97 76.3
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 1.4e-34 150.2 156 59.0
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 1.8e-34 149.8 96 77.1
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 1.8e-34 149.8 96 78.1
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 1.8e-34 149.8 96 78.1
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 1.8e-34 149.8 96 78.1
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 1.8e-34 149.8 96 78.1
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 1.8e-34 149.8 96 78.1
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 1.8e-34 149.8 104 73.1
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 2.4e-34 149.4 168 58.9
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 2.4e-34 149.4 100 80.0
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 3.1e-34 149.1 96 77.1
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 3.1e-34 149.1 97 78.4
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 4.1e-34 148.7 119 67.2
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 4.1e-34 148.7 96 77.1
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 6.9e-34 147.9 171 51.5
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 9.1e-34 147.5 97 75.3
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 9.1e-34 147.5 132 64.4
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 1.2e-33 147.1 149 58.4
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 2.0e-33 146.4 157 56.7
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 2.6e-33 146.0 91 79.1
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 2.6e-33 146.0 155 56.8
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 2.6e-33 146.0 162 56.2
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 2.6e-33 146.0 130 63.8
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 3.4e-33 145.6 165 54.5
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 4.5e-33 145.2 96 76.0
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 5.9e-33 144.8 94 75.5
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 5.9e-33 144.8 98 73.5
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 5.9e-33 144.8 130 63.1
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 5.9e-33 144.8 97 74.2
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 7.7e-33 144.4 113 67.3
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 1.0e-32 144.1 166 53.6
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 1.3e-32 143.7 133 60.2
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 2.2e-32 142.9 97 73.2
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 2.2e-32 142.9 101 73.3
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 5.0e-32 141.7 97 73.2
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 6.5e-32 141.4 131 62.6
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 6.5e-32 141.4 120 63.3
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 6.5e-32 141.4 98 76.5
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 8.5e-32 141.0 100 75.0
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 1.1e-31 140.6 110 67.3
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 1.4e-31 140.2 118 63.6
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 1.9e-31 139.8 136 58.1
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 3.2e-31 139.0 88 77.3
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 7.2e-31 137.9 95 70.5
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 9.4e-31 137.5 92 71.7
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 1.2e-30 137.1 87 74.7
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 2.1e-30 136.3 96 70.8
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 3.6e-30 135.6 144 57.6
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 4.7e-30 135.2 147 53.7
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 1.0e-29 134.0 82 80.5
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 1.8e-29 133.3 79 82.3
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 3.9e-29 132.1 89 74.2
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 7.4e-28 127.9 95 69.5
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 9.7e-28 127.5 97 66.0
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 9.7e-28 127.5 152 52.0
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 2.8e-27 125.9 73 84.9
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 8.2e-27 124.4 77 80.5
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 8.2e-27 124.4 91 68.1
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 3.1e-26 122.5 92 67.4
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 9.1e-26 120.9 124 54.8
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 4.5e-25 118.6 78 76.9
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 1.0e-24 117.5 84 69.0
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 2.7e-22 109.4 164 47.6
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 1.7e-19 100.1 82 61.0
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 2.8e-19 99.4 76 61.8
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 1.2e-17 94.0 53 88.7
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 8.5e-16 87.8 82 57.3
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 4.2e-15 85.5 189 33.9
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 4.2e-15 85.5 189 33.9
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 7.2e-15 84.7 79 45.6
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 6.1e-14 81.6 49 79.6
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 8.8e-13 77.8 109 44.0
Actinidia28897 Actinidia chinensis HOM05D006461 ORTHO05D008199 2.8e-11 72.8 44 77.3
Cpa.g.sc2589.1 Carica papaya HOM05D006461 ORTHO05D008199 1.1e-10 70.9 49 69.4
TPR.G35538 Trifolium pratense HOM05D006461 ORTHO05D008199 9.1e-10 67.8 94 48.9
AT5G17560 Arabidopsis thaliana HOM05D006461 ORTHO05D008199 1.6e-09 67.0 48 64.6
Mapoly0051s0029 Marchantia polymorpha HOM05D002854 ORTHO05D003051 5.5e-07 58.5 97 41.2
AL3G12640 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 2.7e-06 56.2 74 50.0
Thhalv10002241m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 3.6e-06 55.8 46 69.6
AL3G12680 Arabidopsis lyrata HOM05D000403 ORTHO05D000350 8.0e-06 54.7 39 71.8


User provided reference genes

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