Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 3.8e-122 441.4 210 100.0
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 4.1e-108 394.8 210 91.4
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 5.0e-90 334.7 212 78.3
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 3.3e-89 332.0 214 75.2
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 1.4e-87 326.6 215 73.5
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 4.0e-87 325.1 209 78.9
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 7.0e-84 314.3 214 71.5
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 2.6e-78 295.8 209 70.8
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 5.8e-78 294.7 218 67.9
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 1.1e-76 290.4 213 65.3
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 7.1e-76 287.7 210 69.5
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 6.8e-71 271.2 164 74.4
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 2.6e-70 269.2 166 73.5
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 2.6e-70 269.2 164 73.8
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 3.4e-70 268.9 164 73.8
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 1.3e-69 266.9 164 75.6
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 2.2e-69 266.2 160 72.5
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 2.2e-69 266.2 164 73.2
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 2.9e-69 265.8 226 60.2
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.9e-69 265.8 226 60.2
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 3.7e-69 265.4 163 73.6
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 4.9e-69 265.0 225 60.9
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 4.9e-69 265.0 215 61.9
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 6.4e-69 264.6 207 62.8
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 6.4e-69 264.6 226 59.3
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 3.2e-68 262.3 186 64.5
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 4.1e-68 261.9 162 71.0
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 4.1e-68 261.9 224 62.5
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 5.4e-68 261.5 221 61.1
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 1.6e-67 260.0 162 71.0
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 2.1e-67 259.6 223 60.1
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 2.1e-67 259.6 224 60.7
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 2.7e-67 259.2 166 71.7
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 7.8e-67 257.7 218 59.2
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 1.3e-66 256.9 166 69.3
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 2.3e-66 256.1 167 68.3
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 3.0e-66 255.8 164 69.5
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 6.6e-66 254.6 174 65.5
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 6.6e-66 254.6 218 58.3
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 8.6e-66 254.2 167 68.9
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 1.5e-65 253.4 164 68.9
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 1.5e-65 253.4 164 68.9
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 1.5e-65 253.4 164 68.9
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 1.5e-65 253.4 164 68.9
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 1.5e-65 253.4 164 68.9
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 1.5e-65 253.4 164 68.3
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 1.9e-65 253.1 189 64.0
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 3.3e-65 252.3 164 68.3
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 3.3e-65 252.3 164 69.5
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 3.3e-65 252.3 164 69.5
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 3.3e-65 252.3 164 69.5
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 3.3e-65 252.3 183 64.5
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 3.3e-65 252.3 214 58.9
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 1.2e-64 250.4 191 62.3
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 1.2e-64 250.4 164 69.5
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 1.6e-64 250.0 167 66.5
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 1.6e-64 250.0 166 68.1
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 1.1e-63 247.3 189 61.4
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 1.1e-63 247.3 164 69.5
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 1.1e-63 247.3 224 58.0
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 2.4e-63 246.1 164 65.2
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 3.1e-63 245.7 211 57.3
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 4.0e-63 245.4 164 68.9
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 5.2e-63 245.0 164 65.2
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 5.2e-63 245.0 166 68.1
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 5.2e-63 245.0 166 68.1
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 8.9e-63 244.2 125 88.8
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 8.9e-63 244.2 164 65.9
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 3.4e-62 242.3 164 66.5
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 1.3e-61 240.4 227 55.5
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 2.2e-61 239.6 222 53.6
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 2.2e-61 239.6 225 55.1
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 3.8e-61 238.8 164 65.9
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 6.4e-61 238.0 164 65.2
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 1.9e-60 236.5 159 67.3
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 5.4e-60 235.0 170 65.9
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 1.6e-59 233.4 173 61.3
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 1.6e-59 233.4 164 62.8
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 1.0e-58 230.7 160 66.9
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 1.3e-58 230.3 153 65.4
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 1.7e-58 229.9 210 52.4
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 3.0e-58 229.2 139 74.8
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 5.1e-58 228.4 216 55.6
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 5.1e-58 228.4 201 55.7
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 7.6e-54 214.5 164 57.9
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 3.8e-53 212.2 326 40.5
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 7.1e-52 208.0 110 87.3
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 4.8e-48 195.3 214 48.6
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 1.2e-46 190.7 104 81.7
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 9.9e-46 187.6 104 80.8
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 2.9e-45 186.0 185 54.1
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 6.7e-42 174.9 119 72.3
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 2.8e-40 169.5 138 61.6
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 4.6e-35 152.1 157 48.4
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 5.8e-30 135.2 220 42.3
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 1.1e-25 120.9 77 71.4
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 3.7e-24 115.9 134 44.8
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 1.8e-23 113.6 121 47.9
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 3.4e-22 109.4 89 57.3
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 7.9e-19 98.2 137 38.7
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 4.3e-17 92.4 156 37.2
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 6.9e-15 85.1 118 39.8
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 3.8e-13 79.3 41 85.4


User provided reference genes

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