Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 0.0e+00 1715.3 979 100.0
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 0.0e+00 1129.8 1208 61.4
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 5.4e-235 818.5 1352 49.6
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 1.2e-112 412.1 1076 34.4
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 9.5e-107 392.5 1187 38.7
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 5.2e-81 307.0 1148 33.9
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 4.6e-77 293.9 1330 32.2
VMungo1127G1909 Vigna mungo HOM05D008144 ORTHO05D010310 9.3e-38 163.3 116 77.6
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 1.3e-36 159.5 174 56.9
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 3.0e-36 158.3 233 45.9
VMungo0251G0623 Vigna mungo HOM05D008144 ORTHO05D051601 5.3e-33 147.5 289 38.4
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 2.2e-31 142.1 225 44.4
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 7.2e-30 137.1 178 48.9
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 6.1e-29 134.0 178 47.2
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 6.1e-29 134.0 238 42.9
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 1.0e-28 133.3 682 27.3
Ca_05179_v3 Cicer arietinum L. HOM05D008144 ORTHO05D010081 1.4e-28 132.9 431 42.2
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 2.6e-27 128.6 530 29.2
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 4.4e-27 127.9 771 27.1
VMungo0251G1547 Vigna mungo HOM05D008144 ORTHO05D051601 8.2e-26 123.6 145 51.7
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 6.9e-25 120.6 753 26.7
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 1.2e-24 119.8 164 47.0
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 4.5e-24 117.9 178 43.8
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 1.3e-23 116.3 809 26.2
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 2.2e-23 115.5 767 25.8
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 5.0e-23 114.4 1080 25.0
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 5.0e-23 114.4 238 35.3
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 2.5e-22 112.1 446 28.5
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.6e-21 108.2 268 34.7
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 6.1e-21 107.5 268 34.3
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 8.0e-21 107.1 268 34.3
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 8.0e-21 107.1 731 24.8
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.0e-20 106.7 268 34.3
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.0e-20 106.7 268 34.3
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 1.8e-20 105.9 209 35.9
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 2.0e-19 102.4 645 26.8
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 1.7e-18 99.4 721 27.7
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 8.2e-18 97.1 176 37.5
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 5.9e-16 90.9 131 40.5
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 1.3e-15 89.7 817 25.1
arahy.Tifrunner.gnm1.ann1.9W8MHJ Arachis hypogaea HOM05D048597 ORTHO05D038870 1.1e-14 86.7 758 25.9
arahy.Tifrunner.gnm1.ann1.PTW3I8 Arachis hypogaea HOM05D048597 ORTHO05D038870 3.2e-14 85.1 727 27.5
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 7.2e-14 84.0 183 39.9
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 2.1e-13 82.4 724 24.3
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 3.6e-13 81.6 287 28.9
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 6.1e-13 80.9 162 35.2
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 1.0e-12 80.1 167 38.3
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 5.2e-12 77.8 741 25.1
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 6.7e-12 77.4 162 34.6
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 4.4e-11 74.7 244 28.7
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 5.7e-11 74.3 279 28.0
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 5.7e-11 74.3 366 26.2
TAR633G0610 Trochodendron aralioides HOM05D008144 ORTHO05D010081 5.7e-11 74.3 127 35.4
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 2.2e-10 72.4 304 26.3
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 4.8e-10 71.2 644 24.8
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 8.2e-10 70.5 1139 21.8
Nn1g02499 Nelumbo nucifera HOM05D008144 ORTHO05D010081 9.1e-09 67.0 197 34.0
TAR362G0851 Trochodendron aralioides HOM05D008144 ORTHO05D010081 9.1e-09 67.0 725 24.4
vmacro08386 Vaccinium macrocarpon HOM05D008144 ORTHO05D010081 2.9e-07 62.0 337 28.8
THA.LOC104809081 Tarenaya hassleriana HOM05D011210 ORTHO05D013204 4.2e-06 58.2 170 31.8
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 5.5e-06 57.8 139 33.8
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 5.5e-06 57.8 220 26.4
Sabra10G0062200 Salix brachista HOM05D008144 ORTHO05D010081 9.4e-06 57.0 129 34.1


User provided reference genes

Program Settings