Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 2.9e-70 268.5 136 100.0
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 2.2e-54 215.7 141 82.3
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 1.4e-45 186.4 117 82.1
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 7.9e-44 180.6 116 80.2
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 1.0e-43 180.3 116 79.3
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 1.0e-43 180.3 121 77.7
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 1.3e-43 179.9 120 76.7
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 1.3e-43 179.9 120 76.7
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 1.3e-43 179.9 116 79.3
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 2.3e-43 179.1 119 76.5
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 3.0e-43 178.7 116 78.4
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 3.0e-43 178.7 117 76.9
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 3.9e-43 178.3 121 76.9
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 3.9e-43 178.3 116 78.4
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 3.9e-43 178.3 120 76.7
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 6.7e-43 177.6 140 71.4
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 8.7e-43 177.2 127 73.2
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 8.7e-43 177.2 118 78.0
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 1.1e-42 176.8 120 75.8
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 1.1e-42 176.8 115 76.5
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.1e-42 176.8 117 78.6
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 1.5e-42 176.4 142 70.4
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.9e-42 176.0 136 68.4
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 2.5e-42 175.6 121 77.7
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 3.3e-42 175.3 117 75.2
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 3.3e-42 175.3 118 81.4
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 3.3e-42 175.3 130 73.1
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 4.3e-42 174.9 121 74.4
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 4.3e-42 174.9 117 77.8
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 5.6e-42 174.5 117 79.5
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 5.6e-42 174.5 119 76.5
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 7.4e-42 174.1 117 75.2
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 7.4e-42 174.1 121 74.4
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 7.4e-42 174.1 121 74.4
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 7.4e-42 174.1 116 75.9
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 9.6e-42 173.7 117 74.4
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 1.3e-41 173.3 132 73.5
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 1.3e-41 173.3 135 68.9
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 1.3e-41 173.3 135 68.9
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.3e-41 173.3 142 70.4
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 2.1e-41 172.6 119 76.5
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 2.1e-41 172.6 125 74.4
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 3.7e-41 171.8 117 74.4
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 3.7e-41 171.8 136 70.6
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 3.7e-41 171.8 134 69.4
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 3.7e-41 171.8 141 69.5
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 3.7e-41 171.8 117 75.2
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 4.8e-41 171.4 123 72.4
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 4.8e-41 171.4 133 69.2
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 6.2e-41 171.0 119 73.9
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 6.2e-41 171.0 131 70.2
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 6.2e-41 171.0 117 76.1
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 6.2e-41 171.0 132 68.9
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 8.1e-41 170.6 134 69.4
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 8.1e-41 170.6 134 70.1
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 1.1e-40 170.2 116 75.9
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 1.1e-40 170.2 134 67.9
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 1.1e-40 170.2 117 76.1
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.1e-40 170.2 117 76.1
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 1.1e-40 170.2 131 68.7
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 1.4e-40 169.9 121 75.2
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 1.4e-40 169.9 121 75.2
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 1.4e-40 169.9 130 66.9
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 1.4e-40 169.9 120 76.7
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 1.8e-40 169.5 147 65.3
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 1.8e-40 169.5 128 72.7
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 1.8e-40 169.5 138 68.1
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 2.4e-40 169.1 128 71.9
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 2.4e-40 169.1 140 67.9
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 2.4e-40 169.1 117 76.1
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 3.1e-40 168.7 121 73.6
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 3.1e-40 168.7 140 67.9
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 3.1e-40 168.7 138 65.9
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 4.0e-40 168.3 117 76.1
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 4.0e-40 168.3 117 76.1
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 4.0e-40 168.3 125 73.6
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 5.3e-40 167.9 131 67.9
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 5.3e-40 167.9 137 67.2
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 6.9e-40 167.5 117 76.1
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 6.9e-40 167.5 121 71.1
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 1.2e-39 166.8 137 67.2
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 1.2e-39 166.8 129 69.0
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 1.5e-39 166.4 117 74.4
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.5e-39 166.4 118 72.0
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 2.6e-39 165.6 118 71.2
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 3.4e-39 165.2 119 73.9
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 4.5e-39 164.9 120 72.5
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 4.5e-39 164.9 117 73.5
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 9.9e-39 163.7 128 69.5
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.3e-38 163.3 146 63.0
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 2.2e-38 162.5 126 67.5
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 4.9e-38 161.4 117 70.9
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 6.4e-38 161.0 120 70.8
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 6.4e-38 161.0 122 73.0
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 1.4e-37 159.8 131 66.4
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.9e-37 159.5 153 58.8
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 1.9e-37 159.5 117 71.8
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 2.4e-37 159.1 119 70.6
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 5.5e-37 157.9 117 69.2
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 7.1e-37 157.5 130 64.6
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 1.2e-36 156.8 131 64.9
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 4.6e-36 154.8 117 69.2
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 7.9e-36 154.1 117 68.4
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 1.3e-35 153.3 141 63.8
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 1.3e-35 153.3 132 66.7
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 3.9e-35 151.8 133 62.4
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 8.7e-35 150.6 166 51.8
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 1.1e-34 150.2 78 93.6
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 1.5e-34 149.8 128 61.7
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 1.9e-34 149.4 132 59.1
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 2.8e-33 145.6 118 66.1
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 1.4e-32 143.3 78 87.2
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 9.0e-32 140.6 80 83.8
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 1.5e-31 139.8 95 76.8
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 1.3e-30 136.7 81 85.2
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 2.9e-30 135.6 75 82.7
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 8.7e-27 124.0 134 53.7
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 2.5e-26 122.5 132 54.5
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 1.3e-25 120.2 108 59.3
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 4.5e-23 111.7 115 53.0
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 5.9e-23 111.3 88 64.8
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 1.1e-21 107.1 75 66.7
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 2.1e-20 102.8 75 65.3
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 2.7e-20 102.4 93 62.4
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 1.3e-17 93.6 92 51.1
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 2.6e-15 85.9 73 57.5
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 1.2e-07 60.5 36 83.3
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 1.7e-06 56.6 65 47.7


User provided reference genes

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