Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-128 463.0 227 100.0
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.8e-108 394.4 227 83.3
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-107 392.9 227 83.7
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.9e-107 392.1 227 83.3
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.1e-104 381.3 227 78.0
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-103 379.8 228 80.7
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 1.6e-102 376.3 227 80.2
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.0e-101 371.7 227 78.0
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 2.0e-100 369.4 225 78.7
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-99 366.3 227 78.0
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.2e-98 361.7 208 82.7
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.0e-97 357.8 208 82.2
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 5.1e-96 354.8 219 77.2
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.6e-92 340.9 225 71.6
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-91 340.1 225 71.1
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 3.5e-89 332.0 223 72.6
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 4.8e-78 295.0 227 65.6
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.3e-77 291.6 224 64.3
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 8.4e-75 284.3 224 60.3
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 4.8e-70 268.5 220 57.7
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-69 266.5 226 61.9
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 9.0e-69 264.2 224 54.9
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 2.0e-68 263.1 224 54.5
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 2.0e-68 263.1 222 55.9
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 2.0e-68 263.1 222 55.9
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 2.0e-68 263.1 223 57.8
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.0e-67 260.8 222 57.7
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.9e-67 259.2 269 48.0
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.8e-67 258.8 224 56.7
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.8e-67 258.8 225 56.4
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 3.8e-67 258.8 223 53.8
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.5e-66 255.0 225 56.0
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.5e-66 255.0 225 56.0
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.3e-64 250.4 225 54.7
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-64 249.2 223 54.7
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 3.9e-64 248.8 223 56.1
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-63 246.9 225 53.3
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 1.9e-63 246.5 225 54.7
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 2.5e-63 246.1 225 52.9
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.5e-63 246.1 225 53.8
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 7.4e-63 244.6 223 53.8
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-62 243.8 223 52.9
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.4e-61 240.4 207 57.0
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.8e-61 240.0 225 52.4
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.9e-61 238.0 224 52.7
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 9.0e-61 237.7 224 52.2
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 9.0e-61 237.7 224 52.2
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.0e-61 237.7 224 51.8
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 5.9e-60 235.0 225 50.2
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.9e-60 235.0 224 51.3
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-59 233.4 215 56.3
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 5.5e-58 228.4 225 51.6
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.9e-57 224.6 135 78.5
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 6.7e-56 221.5 226 48.2
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 8.8e-56 221.1 219 51.1
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 4.1e-53 212.2 228 50.4
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 9.1e-53 211.1 223 48.9
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 1.5e-52 210.3 136 78.7
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.5e-50 203.0 171 58.5
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.2e-50 202.6 117 80.3
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 4.2e-50 202.2 225 47.6
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 4.2e-50 202.2 225 47.6
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 4.2e-50 202.2 225 47.6
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 3.9e-48 195.7 222 50.9
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 8.8e-48 194.5 223 47.5
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.5e-47 193.7 223 47.1
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.0e-47 193.4 225 45.8
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 3.3e-47 192.6 234 45.3
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 7.4e-47 191.4 235 44.7
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 3.7e-46 189.1 223 44.8
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.5e-44 182.6 223 46.2
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 7.7e-44 181.4 220 45.0
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.9e-43 179.5 226 42.0
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 2.9e-43 179.5 232 43.5
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 2.9e-43 179.5 224 44.2
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.2e-42 174.9 144 59.0
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 4.7e-41 172.2 227 45.8
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 8.0e-41 171.4 221 43.0
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 2.3e-40 169.9 223 44.8
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 4.4e-39 165.6 226 41.2
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 7.5e-39 164.9 164 50.6
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 4.8e-38 162.2 211 45.0
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 4.8e-38 162.2 222 43.2
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 6.3e-38 161.8 208 45.2
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 6.3e-38 161.8 145 53.1
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.1e-37 161.0 229 39.3
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 5.3e-37 158.7 211 40.3
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 9.1e-37 157.9 164 48.2
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 9.1e-37 157.9 140 55.7
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 1.2e-36 157.5 127 59.1
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.2e-36 157.5 223 39.5
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 1.6e-36 157.1 224 39.3
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.0e-36 156.8 224 40.2
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.0e-36 156.8 224 40.2
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-36 156.8 223 42.2
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 2.6e-36 156.4 222 40.5
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 3.8e-35 152.5 193 42.0
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 1.1e-34 151.0 195 44.1
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 1.6e-33 147.1 196 43.9
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 2.1e-33 146.7 143 51.0
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 2.7e-33 146.4 230 37.8
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-32 144.1 303 33.0
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 3.0e-32 142.9 235 38.3
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 5.2e-32 142.1 182 43.4
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 1.8e-29 133.7 196 37.2
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 9.1e-29 131.3 134 48.5
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 9.1e-29 131.3 134 48.5
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 2.7e-28 129.8 211 39.8
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.2e-27 126.7 226 36.7
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 2.9e-27 126.3 121 54.5
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.8e-27 125.9 220 34.1
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.7e-25 119.8 123 54.5
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 6.1e-25 118.6 127 44.1
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-24 117.5 110 52.7
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 8.8e-24 114.8 125 48.8
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 5.7e-23 112.1 136 47.8
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.8e-23 111.3 165 43.0
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 6.3e-22 108.6 180 38.9
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.5e-18 96.7 145 36.6
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.2e-17 94.4 136 41.2
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 2.3e-16 90.1 112 39.3
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 4.0e-16 89.4 133 39.1
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 4.4e-15 85.9 102 44.1
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 8.3e-14 81.6 125 41.6
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 7.0e-13 78.6 76 48.7
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 1.2e-12 77.8 93 41.9
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 1.6e-09 67.4 76 43.4
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 1.0e-08 64.7 81 39.5
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 5.2e-08 62.4 158 32.3
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 6.8e-08 62.0 84 39.3
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 4.4e-07 59.3 69 44.9
Psat1g051400 Pisum sativum HOM05D005276 ORTHO05D006813 7.5e-07 58.5 85 41.2
Dinv03816 Davidia involucrata HOM05D031496 ORTHO05D029219 2.2e-06 57.0 57 38.6


User provided reference genes

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