Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.7e-119 430.3 208 100.0
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.3e-118 428.3 208 99.5
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.5e-105 385.6 207 89.9
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.8e-103 377.1 208 86.5
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-100 370.2 208 83.2
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.5e-99 364.8 208 83.2
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.8e-98 361.7 208 83.2
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.5e-97 359.0 208 82.2
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.1e-96 355.9 203 83.3
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 8.2e-93 344.0 207 79.7
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.6e-91 339.0 208 77.9
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 8.5e-90 334.0 207 78.3
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.7e-87 324.3 206 74.8
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.6e-86 322.4 206 73.8
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 4.1e-84 315.1 205 73.7
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 3.5e-83 312.0 202 72.3
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 3.7e-69 265.4 207 64.3
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-67 259.6 203 63.5
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.5e-67 258.5 209 63.2
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 4.0e-63 245.4 205 56.1
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-62 243.8 203 56.2
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-62 243.8 203 56.2
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.5e-62 241.1 205 58.0
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 8.3e-61 237.7 195 54.9
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.4e-60 236.1 206 55.8
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 2.4e-60 236.1 206 53.4
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 2.4e-60 236.1 206 55.3
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 7.0e-60 234.6 207 53.1
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 7.0e-60 234.6 207 53.1
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 2.0e-59 233.0 204 52.9
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.7e-59 232.6 134 81.3
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.9e-59 231.5 207 54.6
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 3.8e-58 228.8 206 54.4
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.6e-58 228.0 207 54.1
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.6e-58 228.0 207 54.1
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.9e-57 226.5 206 53.9
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 2.5e-57 226.1 206 52.9
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.6e-57 224.9 198 57.6
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 7.3e-57 224.6 206 53.4
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 9.5e-57 224.2 208 53.4
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 8.0e-56 221.1 205 52.2
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.8e-55 219.9 206 51.9
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 2.3e-55 219.5 207 52.7
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.3e-55 219.5 206 52.9
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-54 216.9 206 51.9
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.5e-54 216.9 206 51.5
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-53 213.8 206 51.0
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.3e-53 213.8 207 50.2
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-53 213.4 206 51.0
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.7e-53 213.4 207 51.2
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 1.7e-53 213.4 207 51.2
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.2e-53 213.0 126 78.6
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.3e-53 211.1 189 54.0
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 3.2e-52 209.1 207 51.2
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 5.0e-50 201.8 209 50.7
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.6e-50 201.1 171 57.9
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-49 200.7 209 49.3
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 2.5e-49 199.5 206 50.5
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 5.6e-49 198.4 199 49.7
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.6e-43 180.3 206 48.1
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-43 180.3 143 61.5
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 3.5e-43 179.1 216 46.3
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 4.6e-43 178.7 208 46.6
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 4.6e-43 178.7 208 46.6
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 4.6e-43 178.7 208 46.6
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 5.1e-42 175.3 206 48.1
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 6.6e-42 174.9 216 45.4
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.9e-41 173.3 207 46.9
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.3e-41 172.6 206 47.1
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 3.6e-40 169.1 118 72.0
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 4.7e-40 168.7 206 44.7
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 2.3e-39 166.4 203 44.8
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.5e-38 163.7 206 44.7
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 7.5e-38 161.4 215 40.9
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.9e-37 158.7 166 48.2
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 4.1e-36 155.6 164 47.6
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 9.2e-36 154.5 140 53.6
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.1e-35 153.3 209 39.7
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 4.6e-35 152.1 206 42.2
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.0e-34 151.0 147 51.7
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.7e-34 150.2 189 43.9
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.7e-34 150.2 189 43.9
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 2.3e-34 149.8 182 46.7
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-34 149.4 209 43.5
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 8.6e-34 147.9 211 40.3
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 2.5e-33 146.4 127 55.1
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.1e-31 141.0 212 39.2
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 1.1e-31 141.0 184 43.5
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 1.1e-31 141.0 204 37.3
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 2.4e-31 139.8 205 38.5
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 2.4e-31 139.8 206 41.3
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 4.0e-31 139.0 175 46.9
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-30 136.7 207 39.1
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 3.4e-30 136.0 127 54.3
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 7.6e-30 134.8 178 45.5
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 7.6e-30 134.8 110 59.1
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 2.2e-29 133.3 171 39.8
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 8.4e-29 131.3 206 37.4
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 8.4e-29 131.3 210 38.1
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 1.9e-28 130.2 138 47.1
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 3.2e-28 129.4 177 39.0
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 3.2e-28 129.4 194 36.6
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.0e-27 125.2 109 56.9
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 3.0e-26 122.9 125 52.8
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.9e-26 122.5 164 42.1
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 8.7e-26 121.3 116 49.1
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 9.6e-25 117.9 287 29.6
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.1e-24 116.7 210 32.9
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.2e-22 110.9 206 35.9
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 2.0e-22 110.2 125 46.4
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 5.8e-22 108.6 117 46.2
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 5.8e-22 108.6 117 46.2
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 8.4e-21 104.8 164 38.4
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.5e-19 99.4 143 37.8
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.0e-19 98.6 106 51.9
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.0e-18 97.8 208 33.7
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 5.1e-18 95.5 124 43.5
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 8.7e-18 94.7 120 46.7
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 4.8e-16 89.0 112 38.4
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 6.2e-16 88.6 176 35.2
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 1.8e-15 87.0 102 45.1
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.0e-14 83.6 98 45.9
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 5.8e-14 82.0 169 33.7
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 7.6e-14 81.6 93 44.1
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 2.2e-13 80.1 76 51.3
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 7.4e-09 65.1 66 45.5
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 7.4e-09 65.1 73 45.2
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 2.8e-08 63.2 134 31.3
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 4.8e-08 62.4 73 49.3
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 1.8e-07 60.5 135 33.3
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-07 60.1 135 33.3


User provided reference genes

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