Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.0e-88 327.4 156 100.0
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.3e-84 315.5 152 98.0
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.3e-63 245.7 152 78.9
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.2e-34 149.4 123 62.6
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.5e-34 147.9 133 61.7
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.1e-31 138.3 154 50.6
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.7e-31 137.9 123 61.0
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 8.8e-31 137.5 146 54.1
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-28 130.2 123 57.7
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.9e-28 127.9 123 56.1
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 2.0e-27 126.3 124 54.8
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.4e-27 125.6 123 56.9
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.5e-27 125.2 123 56.1
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 2.2e-26 122.9 124 55.6
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-25 120.6 123 54.5
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.4e-25 120.2 124 54.0
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.1e-24 114.8 144 47.2
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.1e-24 114.8 124 53.2
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.9e-23 112.1 123 52.8
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 2.6e-22 109.4 123 47.2
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 2.8e-21 105.9 123 47.2
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 2.8e-21 105.9 123 47.2
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 1.8e-20 103.2 127 46.5
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.3e-20 101.7 106 52.8
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 7.0e-20 101.3 123 45.5
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 7.0e-20 101.3 123 44.7
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 7.0e-20 101.3 144 42.4
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-19 100.5 123 45.5
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-19 100.5 123 46.3
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-19 100.5 123 45.5
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-19 99.8 123 43.9
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 2.6e-19 99.4 123 43.9
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.7e-19 97.8 106 51.9
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-18 96.7 123 42.3
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-18 96.7 123 42.3
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.2e-18 96.3 123 45.5
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 2.9e-18 95.9 102 52.9
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 5.0e-18 95.1 124 44.4
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.9e-17 93.2 126 44.4
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 3.2e-17 92.4 123 42.3
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 3.2e-17 92.4 123 42.3
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 5.5e-17 91.7 143 40.6
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 9.4e-17 90.9 136 38.2
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.4e-17 90.9 124 43.5
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.6e-16 90.1 126 42.9
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.6e-16 90.1 126 42.9
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 1.6e-16 90.1 122 42.6
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.1e-16 89.7 134 39.6
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 6.1e-16 88.2 123 41.5
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 6.1e-16 88.2 123 41.5
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.4e-15 87.0 126 40.5
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 1.4e-15 87.0 132 37.1
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.8e-15 86.7 126 42.9
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.0e-15 85.9 126 39.7
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-15 85.9 122 40.2
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 8.8e-15 84.3 134 37.3
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 8.8e-15 84.3 134 37.3
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.1e-14 84.0 134 36.6
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.5e-14 83.6 124 40.3
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.5e-14 83.6 134 37.3
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 2.6e-14 82.8 132 40.9
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 3.3e-14 82.4 136 36.8
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.3e-14 82.4 124 39.5
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 4.8e-13 78.6 156 35.3
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 6.3e-13 78.2 123 37.4
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 1.1e-12 77.4 131 38.2
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-11 73.9 124 39.5
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-11 73.9 124 39.5
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-11 73.9 124 39.5
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-11 73.9 124 39.5
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-11 73.9 124 39.5
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.2e-11 73.9 124 37.9
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 1.2e-11 73.9 145 35.2
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 2.6e-11 72.8 119 37.8
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.0e-10 70.9 141 33.3
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.9e-10 69.3 124 40.3
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.9e-10 69.3 145 33.1
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 3.8e-10 68.9 122 36.9
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 6.5e-10 68.2 135 34.1
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 6.5e-10 68.2 127 37.8
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-09 67.4 155 31.6
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 1.5e-09 67.0 133 36.1
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 2.5e-09 66.2 123 39.0
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 3.2e-09 65.9 122 36.9
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.2e-09 65.5 156 30.8
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.2e-09 65.5 156 30.8
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.2e-09 65.5 136 27.2
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.1e-08 63.2 108 37.0
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 2.1e-08 63.2 119 35.3
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 2.1e-08 63.2 126 36.5
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 2.1e-08 63.2 144 30.6
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-08 62.8 119 37.0
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 3.6e-08 62.4 91 38.5
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 3.6e-08 62.4 89 39.3
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.0e-07 60.8 124 37.1
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 1.4e-07 60.5 124 34.7
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-07 59.3 126 34.1
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 3.0e-07 59.3 121 37.2
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 1.5e-06 57.0 122 36.1
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 7.5e-06 54.7 120 30.8
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 9.7e-06 54.3 123 35.0


User provided reference genes

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