Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.1e-144 513.8 245 100.0
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.9e-113 411.4 240 82.1
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-83 313.9 152 98.0
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-77 293.9 215 67.4
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-72 276.9 225 63.1
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.7e-70 268.1 242 59.5
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-67 259.6 215 61.9
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 3.8e-65 252.3 238 57.1
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 5.0e-65 251.9 216 59.3
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.5e-64 248.4 215 59.5
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.5e-64 248.4 215 58.6
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 1.2e-63 247.3 216 59.3
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.7e-63 246.1 215 60.5
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-62 243.4 215 58.1
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 3.0e-62 242.7 216 59.7
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-60 236.9 216 57.4
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.8e-60 235.3 215 56.3
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.5e-58 229.2 215 56.3
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.5e-58 228.8 198 58.1
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.5e-57 224.9 198 57.6
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 4.4e-53 212.2 210 54.3
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-49 200.7 215 49.3
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 1.2e-47 194.1 216 47.7
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.8e-47 193.0 215 47.9
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 6.8e-46 188.3 216 46.3
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 8.9e-46 188.0 216 46.8
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 8.9e-46 188.0 214 47.7
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-45 187.2 216 45.8
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 4.4e-45 185.7 216 45.4
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.7e-45 185.3 130 68.5
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 5.7e-45 185.3 235 43.8
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 7.5e-45 184.9 215 44.7
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 7.5e-45 184.9 215 44.7
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 7.0e-43 178.3 268 39.6
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 5.0e-41 172.2 207 44.9
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 5.0e-41 172.2 207 44.9
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 6.6e-41 171.8 192 46.9
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.6e-41 171.4 215 42.8
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 8.6e-41 171.4 198 48.0
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-40 171.0 217 44.2
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 2.5e-40 169.9 192 45.8
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.5e-40 169.9 214 41.6
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.3e-40 169.5 209 45.0
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.3e-40 169.1 215 44.2
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.3e-40 169.1 215 43.7
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 9.5e-40 167.9 215 43.3
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.5e-40 167.9 217 43.3
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.6e-39 167.2 215 40.9
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 2.8e-39 166.4 217 41.9
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.8e-39 166.4 209 44.0
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.8e-39 166.4 209 44.0
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.6e-39 166.0 207 44.4
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.7e-39 165.6 119 69.7
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.3e-38 163.3 217 41.9
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 4.0e-38 162.5 226 42.0
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-37 161.0 197 43.1
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 1.1e-35 154.5 215 40.5
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 1.9e-35 153.7 234 38.0
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 2.0e-34 150.2 244 38.1
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 4.6e-34 149.1 207 41.1
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 4.6e-34 149.1 207 41.1
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 4.6e-34 149.1 207 41.1
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 4.3e-32 142.5 213 40.8
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 9.5e-32 141.4 214 37.9
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.5e-32 141.4 104 64.4
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-30 137.1 238 39.9
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 1.8e-30 137.1 139 51.8
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 8.9e-30 134.8 200 40.0
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.2e-29 134.4 205 40.5
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.4e-29 132.9 206 37.9
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 4.4e-29 132.5 209 39.7
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 9.9e-29 131.3 205 39.0
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-28 131.0 198 38.4
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 1.7e-28 130.6 209 38.8
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 2.9e-28 129.8 211 37.9
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 6.4e-28 128.6 193 39.9
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 1.9e-27 127.1 180 38.3
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.1e-27 125.9 203 36.5
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.1e-27 125.9 203 36.5
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 7.1e-27 125.2 204 36.8
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.2e-26 124.4 150 44.0
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 2.1e-26 123.6 200 39.5
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 7.8e-26 121.7 198 36.9
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-25 120.9 197 38.1
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-25 120.9 204 36.8
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-25 119.8 200 38.0
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.1e-25 119.0 209 33.5
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.1e-24 117.9 209 34.4
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 1.1e-24 117.9 209 34.0
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 3.3e-24 116.3 213 38.0
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 1.6e-23 114.0 204 38.2
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 1.6e-23 114.0 213 36.6
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.8e-23 113.2 177 38.4
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 3.6e-23 112.8 239 32.6
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.2e-23 112.1 231 29.9
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.4e-22 110.9 159 39.0
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.4e-22 110.2 216 31.9
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 2.4e-22 110.2 197 36.0
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-22 110.2 88 63.6
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 5.2e-22 109.0 224 35.7
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 1.2e-21 107.8 218 32.6
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.0e-21 107.1 147 40.8
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 2.6e-21 106.7 278 28.8
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 9.9e-21 104.8 205 33.2
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 1.3e-20 104.4 198 33.3
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 1.9e-19 100.5 113 46.0
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 7.1e-19 98.6 146 38.4
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 1.6e-18 97.4 99 47.5
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 6.0e-18 95.5 172 33.1
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 6.0e-18 95.5 146 37.7
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 7.8e-18 95.1 183 32.8
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 3.9e-17 92.8 206 30.6
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 1.6e-15 87.4 136 40.4
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 2.8e-15 86.7 214 29.0
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 2.8e-15 86.7 137 40.9
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 2.8e-15 86.7 137 40.9
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 8.1e-15 85.1 222 29.7
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 1.4e-14 84.3 113 38.1
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 3.4e-13 79.7 111 37.8
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 7.6e-13 78.6 95 37.9
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 9.9e-13 78.2 85 42.4
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 3.2e-11 73.2 80 43.8
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.1e-10 70.5 104 42.3
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 5.1e-09 65.9 92 38.0
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 4.3e-08 62.8 121 32.2
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 7.3e-08 62.0 135 33.3
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 2.1e-07 60.5 91 37.4
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 1.4e-06 57.8 93 34.4


User provided reference genes

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