Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-161 572.0 271 100.0
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-112 410.2 240 82.1
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.2e-85 317.8 227 70.0
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.5e-83 312.0 248 66.1
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.7e-83 311.2 246 65.4
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 2.0e-78 296.6 246 63.4
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-75 286.6 226 65.5
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-73 280.4 226 64.2
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-72 277.3 226 63.7
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.0e-71 274.2 226 64.2
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 1.4e-71 273.9 226 64.2
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.0e-71 272.3 226 62.4
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 1.2e-70 270.8 232 61.2
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 9.7e-70 267.7 226 63.7
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-69 267.3 226 61.9
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-68 264.2 225 62.7
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.3e-68 261.9 209 63.6
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.7e-67 258.1 209 63.2
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.3e-63 246.5 226 58.4
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-62 244.2 152 78.9
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 7.7e-59 231.5 221 56.1
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.2e-54 217.6 230 50.9
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.7e-54 215.3 170 65.3
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-53 214.2 230 48.7
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 1.4e-52 210.7 230 48.7
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 4.1e-52 209.1 229 47.6
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 5.4e-52 208.8 229 48.0
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.0e-52 208.4 143 74.1
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 1.2e-51 207.6 248 46.4
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 1.6e-51 207.2 225 47.1
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 1.6e-51 207.2 225 47.1
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 5.0e-50 202.2 230 47.0
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 5.0e-50 202.2 230 47.8
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 8.6e-50 201.4 271 42.1
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-49 200.7 230 46.5
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.1e-48 195.3 247 43.7
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.0e-47 192.6 253 45.1
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.2e-47 192.2 231 47.6
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.8e-47 191.8 230 46.1
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.5e-46 190.7 247 41.7
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 3.4e-46 189.5 241 44.4
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.8e-46 188.7 230 46.5
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 5.8e-46 188.7 249 42.6
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.5e-46 188.3 250 42.0
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-45 187.2 238 44.1
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.2e-45 186.8 230 46.1
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.2e-45 186.8 230 46.1
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 3.7e-45 186.0 242 43.8
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 4.9e-45 185.7 229 45.4
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 4.9e-45 185.7 229 45.4
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.4e-45 185.3 233 44.6
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 3.2e-44 183.0 239 42.7
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 4.1e-44 182.6 232 44.4
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 6.0e-43 178.7 259 42.9
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.0e-42 175.6 115 71.3
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 8.6e-42 174.9 239 41.4
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 2.5e-41 173.3 232 41.8
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 3.3e-41 172.9 267 39.7
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 6.8e-39 165.2 229 44.5
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 6.8e-39 165.2 229 44.5
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 6.8e-39 165.2 229 44.5
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 1.2e-38 164.5 233 39.5
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.5e-38 161.8 228 43.9
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.3e-37 161.0 206 44.7
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 2.4e-36 156.8 222 43.7
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 6.0e-35 152.1 228 40.4
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.0e-34 151.4 221 42.5
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.3e-34 150.2 182 46.2
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.5e-33 146.7 233 42.9
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 3.3e-33 146.4 232 41.4
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 9.5e-33 144.8 230 39.1
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.1e-32 143.7 229 42.8
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.7e-32 142.5 220 39.1
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.7e-32 142.5 220 39.1
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-31 141.4 224 39.3
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.8e-31 138.7 239 35.1
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 8.9e-31 138.3 229 38.4
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 1.5e-30 137.5 239 37.7
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-30 137.1 111 64.0
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 4.4e-30 136.0 137 54.0
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 7.5e-30 135.2 242 37.2
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-29 134.4 221 38.5
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 2.2e-29 133.7 225 37.8
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.7e-29 132.9 180 40.0
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 3.7e-29 132.9 233 39.5
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 6.4e-29 132.1 224 37.9
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 1.4e-28 131.0 220 35.5
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 9.2e-28 128.3 236 39.0
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 2.1e-27 127.1 203 40.9
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 1.0e-26 124.8 145 46.9
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-26 124.4 212 37.7
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.7e-26 124.0 229 34.1
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 2.3e-26 123.6 226 38.1
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 3.0e-26 123.2 267 33.7
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.9e-26 122.9 229 35.8
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.9e-25 120.6 253 32.0
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 3.3e-25 119.8 226 37.2
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 4.3e-25 119.4 242 36.8
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 4.3e-25 119.4 131 48.1
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 4.3e-25 119.4 177 39.5
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 9.5e-25 118.2 226 37.6
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-24 117.9 224 38.8
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-24 117.9 197 37.6
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.6e-24 117.5 231 33.3
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 1.6e-24 117.5 219 34.7
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 4.7e-24 115.9 218 36.7
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 2.4e-23 113.6 193 35.8
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 5.2e-23 112.5 221 36.2
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 8.9e-23 111.7 171 36.8
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 5.8e-22 109.0 135 43.0
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 8.4e-21 105.1 134 44.8
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 8.4e-21 105.1 303 28.7
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 6.0e-19 99.0 146 38.4
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-18 97.4 165 38.8
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.3e-18 97.1 118 48.3
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 5.1e-18 95.9 214 31.8
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 5.1e-18 95.9 146 38.4
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.3e-17 92.8 218 31.7
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 1.6e-16 90.9 214 30.8
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 1.6e-16 90.9 137 42.3
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 1.6e-16 90.9 137 42.3
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 2.8e-16 90.1 108 38.0
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.4e-15 87.0 195 30.8
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.4e-15 87.0 132 38.6
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 2.0e-14 84.0 85 45.9
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 2.7e-11 73.6 102 39.2
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 5.1e-10 69.3 141 39.0
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-07 61.2 131 33.6
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 3.1e-07 60.1 92 37.0
Dinv03816 Davidia involucrata HOM05D031496 ORTHO05D029219 3.1e-07 60.1 57 47.4
Psat1g051400 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-06 58.2 72 45.8
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 1.5e-06 57.8 68 41.2


User provided reference genes

Program Settings