Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 1.7e-108 396.7 327 100.0
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 6.5e-68 261.9 154 83.8
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 6.0e-66 255.4 300 73.0
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 3.7e-63 246.1 251 87.6
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 1.4e-59 234.2 289 74.0
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 7.9e-58 228.4 148 77.0
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 1.3e-57 227.6 259 79.9
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 1.1e-56 224.6 308 66.6
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 7.4e-56 221.9 296 68.9
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 9.7e-56 221.5 158 72.8
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 2.5e-48 196.8 293 67.2
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 5.7e-48 195.7 293 53.6
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 1.7e-47 194.1 293 55.6
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 1.7e-47 194.1 293 55.6
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 7.7e-45 185.3 301 59.5
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 1.3e-44 184.5 293 67.9
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 2.9e-44 183.3 296 65.9
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 6.5e-44 182.2 294 64.6
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 6.5e-44 182.2 294 55.1
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 1.1e-43 181.4 293 41.3
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 1.4e-43 181.0 294 64.3
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 1.9e-43 180.6 293 67.2
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 1.9e-43 180.6 289 63.7
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 2.5e-43 180.3 289 54.3
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 2.5e-43 180.3 300 64.7
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 2.5e-43 180.3 300 64.7
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 7.2e-43 178.7 294 63.9
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 9.4e-43 178.3 302 61.3
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 1.6e-42 177.6 302 64.9
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 3.6e-42 176.4 295 63.4
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 4.7e-42 176.0 294 63.9
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 6.1e-42 175.6 293 65.5
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 7.9e-42 175.3 294 63.6
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 1.8e-41 174.1 146 58.9
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 1.8e-41 174.1 155 60.0
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 3.9e-41 172.9 291 54.3
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 5.1e-41 172.6 313 48.9
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 5.1e-41 172.6 313 48.9
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 1.1e-40 171.4 141 61.7
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 2.6e-40 170.2 301 56.8
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 3.3e-40 169.9 150 58.0
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 3.3e-40 169.9 296 63.9
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 3.3e-40 169.9 291 73.2
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 4.4e-40 169.5 300 74.3
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 4.4e-40 169.5 141 61.0
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 7.4e-40 168.7 289 65.4
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 7.4e-40 168.7 141 60.3
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 1.3e-39 167.9 247 69.2
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 2.8e-39 166.8 288 53.8
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 3.7e-39 166.4 296 64.2
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 4.8e-39 166.0 291 73.5
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 4.8e-39 166.0 137 62.0
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 6.3e-39 165.6 294 61.9
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 1.4e-38 164.5 292 60.6
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 1.4e-38 164.5 145 60.0
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 1.8e-38 164.1 145 59.3
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 1.8e-38 164.1 145 57.9
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 1.8e-38 164.1 157 56.1
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 3.1e-38 163.3 300 72.7
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 3.1e-38 163.3 334 40.4
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 5.3e-38 162.5 156 55.8
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 5.3e-38 162.5 156 55.1
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 9.1e-38 161.8 144 61.1
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 9.1e-38 161.8 290 54.1
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 9.1e-38 161.8 143 59.4
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 1.2e-37 161.4 315 49.8
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 1.5e-37 161.0 145 60.0
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 4.5e-37 159.5 290 49.7
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 1.3e-36 157.9 145 57.2
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 2.2e-36 157.1 291 52.6
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 5.0e-36 156.0 141 57.4
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 6.5e-36 155.6 285 70.9
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 6.5e-36 155.6 285 70.9
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 1.9e-35 154.1 263 66.5
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 2.5e-35 153.7 142 54.9
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 7.2e-35 152.1 285 63.9
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 2.1e-34 150.6 151 54.3
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 2.7e-34 150.2 249 67.9
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 1.4e-33 147.9 143 53.1
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 3.0e-33 146.7 289 62.3
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 4.0e-33 146.4 299 34.4
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 5.2e-33 146.0 295 58.6
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 2.2e-31 140.6 300 58.7
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 4.1e-30 136.3 285 61.1
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 2.0e-29 134.0 153 51.0
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 5.9e-29 132.5 303 55.8
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 7.7e-29 132.1 298 47.3
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 2.2e-28 130.6 285 61.1
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 5.0e-28 129.4 146 49.3
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 9.4e-27 125.2 256 58.6
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 2.1e-26 124.0 293 57.3
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 1.2e-24 118.2 219 57.1
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 2.0e-24 117.5 93 61.3
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 5.7e-24 115.9 72 75.0
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 9.8e-24 115.2 143 44.8
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 4.1e-22 109.8 219 54.8
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 1.2e-21 108.2 142 41.5
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 3.8e-20 103.2 135 44.4
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 5.0e-20 102.8 73 65.8
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 5.0e-20 102.8 273 50.2
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 8.5e-20 102.1 147 42.9
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 8.0e-18 95.5 73 61.6
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 1.0e-17 95.1 73 61.6
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 3.1e-14 83.6 80 55.0
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 9.1e-14 82.0 191 34.0


User provided reference genes

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