Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 2.9e-135 485.3 265 100.0
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 9.7e-115 417.2 267 88.0
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 3.8e-103 378.6 258 79.8
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 7.2e-102 374.4 258 79.5
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 8.0e-101 370.9 266 77.1
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 1.8e-97 359.8 255 73.7
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 4.5e-96 355.1 249 78.3
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 1.7e-95 353.2 248 75.0
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 2.9e-95 352.4 266 75.2
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 3.6e-93 345.5 244 77.9
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 3.0e-92 342.4 226 87.2
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 7.5e-91 337.8 267 72.7
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 7.5e-91 337.8 257 73.2
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 4.7e-85 318.5 251 70.5
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 8.9e-84 314.3 220 78.2
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 5.8e-83 311.6 247 70.9
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 3.2e-81 305.8 251 67.7
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 2.7e-80 302.8 263 66.2
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 4.6e-80 302.0 253 68.0
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 4.6e-80 302.0 270 65.2
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 6.0e-80 301.6 248 66.9
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 1.0e-79 300.8 268 63.1
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 2.3e-79 299.7 257 67.3
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 2.3e-79 299.7 268 65.7
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 3.9e-79 298.9 268 66.0
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 3.9e-79 298.9 252 67.9
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 1.9e-78 296.6 221 76.5
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 1.9e-78 296.6 265 65.3
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 4.3e-78 295.4 249 65.9
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 5.6e-78 295.0 268 67.2
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 7.3e-78 294.7 267 64.8
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 7.3e-78 294.7 253 65.6
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 7.3e-78 294.7 250 64.4
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 9.5e-78 294.3 250 64.0
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 9.5e-78 294.3 251 64.1
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 1.2e-77 293.9 253 66.0
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 1.2e-77 293.9 256 64.8
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 2.1e-77 293.1 264 65.2
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.1e-77 293.1 248 64.5
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 2.8e-77 292.7 253 65.6
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.8e-77 292.7 251 64.1
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 1.8e-76 290.0 259 64.5
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 2.3e-76 289.7 259 64.1
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 6.8e-76 288.1 266 60.5
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.6e-75 286.2 256 59.4
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 2.9e-74 282.7 254 65.0
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 3.7e-74 282.3 264 61.7
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 4.9e-74 282.0 243 68.3
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 4.9e-74 282.0 248 64.5
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 1.1e-73 280.8 241 64.7
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 1.4e-73 280.4 266 61.3
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 1.4e-73 280.4 266 61.3
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 1.9e-73 280.0 266 61.3
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 2.4e-73 279.6 274 60.9
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.2e-73 279.3 245 64.5
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 4.1e-73 278.9 266 60.9
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 4.1e-73 278.9 266 60.9
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 4.1e-73 278.9 262 62.2
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 9.2e-73 277.7 251 63.3
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 1.6e-72 276.9 247 63.2
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 3.5e-72 275.8 247 61.9
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 4.6e-72 275.4 250 62.4
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 6.0e-72 275.0 255 61.6
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 7.8e-72 274.6 251 63.3
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 1.3e-71 273.9 282 58.5
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.9e-70 270.0 249 61.4
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 1.9e-70 270.0 253 62.1
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 1.9e-70 270.0 250 62.8
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 6.2e-69 265.0 247 60.7
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 8.9e-68 261.2 260 60.4
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 2.0e-67 260.0 275 59.6
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 6.4e-66 255.0 237 65.0
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 1.4e-65 253.8 258 59.3
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.1e-65 252.3 256 60.2
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 2.7e-64 249.6 251 57.8
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 6.0e-64 248.4 248 59.7
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 6.0e-64 248.4 248 60.9
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 2.1e-61 240.0 251 57.8
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 4.7e-61 238.8 275 54.2
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 8.1e-61 238.0 195 66.2
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 8.1e-61 238.0 251 57.0
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 1.4e-60 237.3 205 63.9
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 2.0e-59 233.4 248 58.1
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 1.3e-58 230.7 247 56.3
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 4.9e-58 228.8 193 63.2
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.9e-57 226.9 249 54.2
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 7.1e-57 224.9 247 57.1
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 4.6e-56 222.2 234 59.0
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 7.8e-56 221.5 221 58.4
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 1.0e-55 221.1 251 55.4
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 3.3e-54 216.1 249 52.6
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 4.8e-53 212.2 238 54.2
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 1.4e-52 210.7 251 52.6
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 4.9e-50 202.2 251 52.6
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 9.3e-49 198.0 240 50.0
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 6.6e-47 191.8 196 56.6
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 1.5e-46 190.7 268 44.4
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 4.3e-46 189.1 129 78.3
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 6.2e-45 185.3 259 42.5
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 1.8e-44 183.7 252 44.0
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.3e-44 182.2 154 62.3
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 6.9e-44 181.8 161 61.5
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 3.4e-43 179.5 248 48.0
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.1e-38 164.5 150 55.3
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 1.8e-36 157.1 263 38.0
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.4e-36 156.8 219 50.7
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.2e-35 154.5 160 57.5
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 1.7e-34 150.6 275 39.3
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 2.5e-30 136.7 264 38.3
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 9.0e-28 128.3 101 64.4
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 9.0e-28 128.3 101 64.4
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 1.5e-27 127.5 162 50.6
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 2.9e-26 123.2 250 38.8
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 1.3e-23 114.4 161 42.9
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 4.5e-19 99.4 346 29.5
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 4.2e-17 92.8 162 40.1
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 4.5e-11 72.8 131 39.7
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 1.9e-09 67.4 45 62.2
arahy.Tifrunner.gnm1.ann1.YLS7HT Arachis hypogaea HOM05D006823 ORTHO05D008608 7.2e-09 65.5 43 79.1
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 2.1e-08 63.9 90 45.6
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 2.7e-08 63.5 57 50.9


User provided reference genes

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