Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.3e-299 1032.3 550 100.0
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 1.0e-275 953.0 555 92.4
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 1.2e-271 939.5 555 89.9
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.4e-269 932.6 556 90.3
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 7.4e-250 867.1 565 82.3
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.3e-249 866.3 565 81.8
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 2.6e-247 858.6 565 80.4
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 1.3e-246 856.3 565 82.7
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 1.6e-244 849.4 565 80.4
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.6e-241 839.3 564 80.0
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 1.5e-231 806.2 636 71.2
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 7.2e-221 770.8 570 73.0
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 8.2e-217 757.3 571 72.2
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.8e-216 756.1 561 72.2
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 3.1e-216 755.4 571 71.8
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 9.1e-216 753.8 572 71.2
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 3.8e-214 748.4 571 70.8
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 6.5e-214 747.7 567 70.5
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 8.5e-214 747.3 565 71.5
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.5e-213 746.5 558 72.0
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 1.9e-213 746.1 565 71.3
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 3.2e-213 745.3 556 72.1
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 5.5e-213 744.6 561 70.2
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 9.4e-213 743.8 567 70.9
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.6e-212 741.9 558 72.0
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 1.0e-211 740.3 571 69.7
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 1.4e-211 740.0 559 70.3
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.8e-211 739.6 562 71.0
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 2.0e-210 736.1 567 71.1
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.3e-210 735.3 558 71.5
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 9.7e-210 733.8 571 70.1
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 9.7e-210 733.8 571 68.3
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.7e-209 733.0 558 70.6
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 2.2e-209 732.6 566 69.3
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 4.5e-207 724.9 566 68.0
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 5.9e-207 724.5 574 67.9
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.3e-206 723.4 556 71.0
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 8.5e-206 720.7 553 70.0
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 1.5e-205 719.9 561 68.3
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.9e-205 719.5 576 67.9
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 3.2e-205 718.8 562 69.9
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 1.2e-202 710.3 561 68.3
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 1.5e-202 709.9 561 67.4
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.0e-202 709.5 566 67.8
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 3.4e-202 708.8 573 66.0
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 3.7e-201 705.3 562 67.1
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 7.0e-200 701.0 567 66.3
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 2.0e-199 699.5 503 74.8
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.7e-198 696.4 569 64.3
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 2.3e-198 696.0 567 64.7
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 1.1e-197 693.7 590 63.4
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.6e-196 689.9 568 64.3
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 2.1e-196 689.5 571 65.0
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 4.7e-196 688.3 584 62.7
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 1.0e-195 687.2 568 66.9
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 1.4e-195 686.8 558 65.9
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 5.2e-195 684.9 568 64.4
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.0e-194 682.9 566 64.1
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 9.8e-194 680.6 556 65.3
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.3e-193 680.2 554 65.2
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 2.2e-193 679.5 554 65.3
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 6.3e-193 677.9 554 64.8
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 4.1e-192 675.2 563 64.1
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 9.2e-192 674.1 564 63.1
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 2.7e-191 672.5 554 64.6
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 4.5e-191 671.8 555 64.9
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 5.9e-191 671.4 558 64.2
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 7.8e-191 671.0 554 64.3
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 1.3e-190 670.2 559 64.2
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 2.3e-190 669.5 566 63.1
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.2e-188 663.7 568 64.3
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 6.1e-188 661.4 552 64.7
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 5.2e-187 658.3 572 62.9
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 2.6e-186 656.0 566 61.7
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 5.8e-186 654.8 571 62.0
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 2.9e-185 652.5 557 63.7
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 2.4e-184 649.4 556 65.1
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 7.8e-183 644.4 568 61.6
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 4.0e-179 632.1 550 62.4
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 4.0e-179 632.1 550 62.2
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 4.0e-179 632.1 550 62.4
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 4.0e-179 632.1 550 62.2
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 1.2e-178 630.6 550 62.2
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.5e-178 630.2 561 62.6
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.4e-171 607.1 569 58.7
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 5.2e-171 605.1 529 61.6
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 5.2e-171 605.1 566 58.5
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.2e-170 604.0 571 57.8
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 4.9e-169 598.6 531 62.3
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 2.7e-167 592.8 575 56.5
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 3.5e-167 592.4 568 57.7
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 5.6e-165 585.1 565 56.1
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 1.1e-160 570.9 633 52.4
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 6.0e-159 565.1 482 63.1
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.0e-150 537.7 513 58.1
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 1.5e-138 497.3 401 65.6
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 5.1e-118 429.1 448 55.8
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 8.2e-116 421.8 590 42.0
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 3.8e-113 412.9 548 43.8
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 5.5e-112 409.1 402 59.0
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 4.5e-98 362.8 588 38.8
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 5.0e-97 359.4 224 78.1
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.6e-95 354.4 235 75.7
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 4.7e-95 352.8 589 36.5
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 1.4e-91 341.3 555 37.5
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 7.2e-88 328.9 305 64.6
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 2.6e-85 320.5 285 62.8
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 1.6e-82 311.2 248 70.2
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 1.8e-70 271.2 266 54.5
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 3.5e-66 256.9 174 69.5
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 1.3e-60 238.4 377 43.8
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 9.9e-53 212.2 152 73.0
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 1.1e-51 208.8 211 56.4
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 2.3e-49 201.1 582 28.7
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 2.4e-38 164.5 157 64.3
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 9.0e-30 136.0 149 52.3
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.8e-25 121.7 71 76.1
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 9.0e-14 82.8 54 79.6
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.1e-10 71.6 77 51.9
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 6.3e-07 60.1 77 42.9


User provided reference genes

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