Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 1.2e-226 789.6 426 100.0
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 3.8e-193 678.3 423 86.1
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 4.6e-167 591.7 416 78.1
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 3.2e-160 568.9 429 75.3
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 2.1e-159 566.2 407 78.1
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 2.7e-159 565.8 423 75.9
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 3.8e-153 545.4 373 79.6
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 2.1e-151 539.7 413 74.1
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 1.1e-139 500.7 517 61.5
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 7.0e-139 498.0 369 72.1
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 5.5e-136 488.4 409 67.5
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 4.7e-135 485.3 355 73.0
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 4.0e-134 482.3 405 66.4
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 5.2e-134 481.9 412 65.5
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 2.0e-133 479.9 402 66.4
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 4.4e-133 478.8 378 69.6
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 9.7e-133 477.6 395 68.1
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 1.3e-132 477.2 416 66.1
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 1.3e-132 477.2 403 66.3
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 6.3e-132 474.9 413 65.1
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 8.2e-132 474.6 344 73.0
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 1.3e-129 467.2 415 63.4
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 1.7e-129 466.8 438 63.2
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 2.2e-129 466.5 400 64.5
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 6.5e-129 464.9 402 64.4
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 6.5e-129 464.9 402 64.4
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 4.2e-128 462.2 413 63.9
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 7.2e-128 461.5 402 64.2
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 2.7e-127 459.5 420 61.2
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 2.7e-127 459.5 392 64.0
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 6.1e-127 458.4 373 66.2
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 1.0e-126 457.6 367 67.6
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 4.4e-125 452.2 373 66.8
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 7.5e-125 451.4 412 61.4
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 2.8e-124 449.5 392 63.3
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 4.8e-124 448.7 388 66.0
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 8.3e-124 448.0 436 59.6
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 1.1e-123 447.6 350 66.3
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 1.1e-123 447.6 287 85.7
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.1e-123 446.0 376 65.7
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.4e-123 445.3 378 65.9
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 3.5e-122 442.6 346 67.9
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 4.5e-122 442.2 374 64.2
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 4.5e-122 442.2 414 62.1
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 1.0e-121 441.0 344 68.9
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.7e-121 440.3 379 65.4
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 2.3e-121 439.9 383 61.6
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 4.2e-120 435.6 417 61.6
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 7.2e-120 434.9 347 68.9
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 2.1e-119 433.3 344 67.7
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 2.8e-119 433.0 390 61.8
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.4e-118 430.6 414 58.2
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 4.0e-118 429.1 405 59.3
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 3.4e-117 426.0 371 62.3
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.4e-117 426.0 474 54.4
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 2.2e-116 423.3 399 59.4
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 3.7e-116 422.5 341 66.3
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 4.9e-116 422.2 409 59.2
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 4.9e-116 422.2 424 59.4
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 6.3e-116 421.8 330 69.7
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 1.4e-115 420.6 408 58.6
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 3.1e-115 419.5 400 58.5
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 1.6e-114 417.2 394 59.1
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 1.6e-114 417.2 394 59.1
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 3.5e-114 416.0 496 51.8
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 5.9e-114 415.2 384 61.5
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 6.6e-113 411.8 399 57.9
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 6.6e-113 411.8 387 59.4
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 1.5e-112 410.6 399 58.6
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 5.6e-112 408.7 344 63.1
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 3.1e-110 402.9 334 63.2
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.1e-110 402.9 450 55.1
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 4.9e-108 395.6 328 64.3
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 4.1e-107 392.5 408 59.1
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 1.6e-106 390.6 398 56.3
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 7.8e-106 388.3 389 56.8
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 3.0e-105 386.3 345 60.3
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 9.5e-104 381.3 362 56.6
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 5.8e-101 372.1 301 67.1
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-101 372.1 303 65.3
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 2.7e-98 363.2 392 52.3
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 1.7e-97 360.5 467 48.8
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 8.6e-97 358.2 307 64.8
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 1.9e-96 357.1 327 57.8
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 1.9e-96 357.1 363 55.9
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 7.3e-96 355.1 309 63.1
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.3e-92 344.4 403 51.9
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 5.1e-89 332.4 330 55.5
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 1.7e-84 317.4 280 62.9
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 2.9e-84 316.6 281 62.3
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 3.1e-78 296.6 371 48.2
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 8.7e-73 278.5 238 62.6
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 2.8e-71 273.5 336 49.1
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 2.4e-70 270.4 434 42.9
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 1.5e-69 267.7 256 60.5
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 4.5e-69 266.2 245 58.0
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 5.8e-69 265.8 219 65.3
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 6.4e-68 262.3 242 62.0
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 3.9e-65 253.1 342 47.1
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 6.7e-65 252.3 206 64.6
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 2.8e-63 246.9 262 55.0
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 1.5e-61 241.1 233 58.4
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 5.8e-61 239.2 241 62.2
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 2.5e-59 233.8 342 42.4
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 9.6e-56 221.9 152 80.3
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 1.3e-55 221.5 327 40.7
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 1.2e-53 214.9 253 49.4
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 1.4e-51 208.0 307 42.3
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 5.7e-48 196.1 343 38.2
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 3.7e-47 193.4 235 53.2
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 1.1e-46 191.8 231 51.9
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 1.0e-44 185.3 233 52.4
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 5.0e-44 183.0 189 54.0
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 5.7e-40 169.5 125 69.6
PRCOL_00003606 Prasinoderma coloniale HOM05D005062 ORTHO05D006410 5.7e-40 169.5 340 37.1
Cre09.g395700 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 2.8e-39 167.2 349 36.4
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 4.8e-39 166.4 155 60.0
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 4.8e-39 166.4 147 63.3
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 4.1e-38 163.3 133 61.7
Cre09.g393250 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 7.7e-37 159.1 339 34.8
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 3.8e-36 156.8 204 42.6
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 5.5e-35 152.9 136 58.1
MCO15G192 Micromonas commoda HOM05D005062 ORTHO05D006410 6.7e-33 146.0 336 31.8
Cre02.g147450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 5.7e-32 142.9 378 32.0
Cre12.g521950 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 3.7e-31 140.2 331 32.9
Cre06.g250450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 7.0e-30 136.0 351 29.6
FAN06G0036 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.3e-28 131.7 124 62.9
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 6.5e-28 129.4 113 60.2
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 8.5e-28 129.0 104 69.2
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 1.1e-27 128.6 102 70.6
FAN01G2457 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.6e-26 123.6 82 82.9
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 1.0e-25 122.1 145 46.2
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 3.0e-25 120.6 84 70.2
FvH4_7g05870 Fragaria vesca HOM05D005062 ORTHO05D006410 6.7e-25 119.4 117 61.5
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 1.1e-22 112.1 153 47.7
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.6e-21 107.5 116 56.0
GSVIVG01034679001 Vitis vinifera HOM05D005062 ORTHO05D006410 2.6e-21 107.5 83 77.1
BraA02t06329Z Brassica rapa HOM05D005062 ORTHO05D006410 2.7e-18 97.4 80 68.8
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 1.8e-17 94.7 84 52.4
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 1.4e-14 85.1 66 63.6
Ca_12794_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 2.4e-14 84.3 53 79.2
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 4.1e-14 83.6 71 56.3
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 5.4e-14 83.2 59 69.5
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 2.7e-13 80.9 64 62.5
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 7.7e-13 79.3 71 54.9
SEGI_01082 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 2.9e-12 77.4 50 80.0
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 5.0e-12 76.6 101 43.6
RcHm_v2.0_Chr1g0332541 Rosa chinensis HOM05D005062 ORTHO05D006410 1.9e-11 74.7 65 60.0
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 7.2e-11 72.8 118 36.4
SEGI_13629 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 6.1e-10 69.7 66 53.0
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.8e-09 68.2 55 65.5
MCO11G881 Micromonas commoda HOM05D005062 ORTHO05D028578 5.7e-08 63.2 348 25.3
Cre02.g095086 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D028578 8.3e-07 59.3 239 25.5
Mapoly0050s0070 Marchantia polymorpha HOM05D000943 ORTHO05D008314 8.3e-07 59.3 233 29.2
MELO3C034937.2 Cucumis melo HOM05D005062 ORTHO05D006410 1.4e-06 58.5 68 58.8
CDE08G0076 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 5.4e-06 56.6 35 74.3
unitig_62.g23077 Utricularia gibba HOM05D000943 ORTHO05D008314 9.1e-06 55.8 281 27.0


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