Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 3.8e-162 574.7 278 100.0
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 2.2e-149 532.3 275 92.4
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 8.0e-144 513.8 280 88.2
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 1.4e-132 476.5 277 80.5
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 7.5e-126 454.1 278 75.5
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 5.2e-119 431.4 277 75.5
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 5.2e-119 431.4 277 75.5
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 8.9e-119 430.6 277 75.5
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 4.9e-117 424.9 281 71.9
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 3.0e-114 415.6 290 69.7
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 3.0e-114 415.6 310 66.5
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 1.5e-110 403.3 274 68.6
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 5.8e-110 401.4 274 70.1
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 8.4e-109 397.5 274 69.3
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 1.4e-108 396.7 274 68.2
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 7.8e-107 391.0 277 66.1
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 1.0e-106 390.6 320 61.6
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 8.7e-106 387.5 277 65.7
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 1.5e-105 386.7 277 66.1
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 5.6e-105 384.8 279 66.3
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 7.3e-105 384.4 277 64.6
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 3.6e-104 382.1 277 65.0
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 6.2e-104 381.3 276 65.6
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 2.4e-103 379.4 273 65.9
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 3.1e-103 379.0 277 66.4
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 4.0e-103 378.6 277 63.9
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 5.3e-103 378.3 277 66.4
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 1.3e-101 373.6 273 63.7
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 8.4e-101 370.9 277 65.0
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 3.2e-100 369.0 273 64.5
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 1.2e-99 367.1 278 62.9
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 7.8e-99 364.4 273 62.6
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 1.0e-98 364.0 296 60.8
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 1.0e-98 364.0 271 63.1
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 1.7e-98 363.2 273 61.9
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 3.9e-98 362.1 268 63.8
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 8.7e-98 360.9 268 63.8
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 1.1e-97 360.5 268 63.4
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 1.5e-97 360.1 271 60.5
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 1.9e-97 359.8 282 60.6
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 2.5e-97 359.4 283 60.4
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 6.2e-96 354.8 270 61.1
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 6.2e-96 354.8 271 60.1
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 1.8e-95 353.2 277 59.2
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 5.3e-95 351.7 274 60.9
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 5.3e-95 351.7 277 59.6
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 3.4e-94 349.0 261 61.3
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 4.5e-94 348.6 272 60.7
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 3.8e-93 345.5 276 59.1
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 4.9e-93 345.1 271 60.9
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 6.4e-93 344.7 272 59.2
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 8.4e-93 344.4 271 60.9
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.9e-92 343.2 279 58.8
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 6.0e-91 338.2 273 57.1
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 3.0e-90 335.9 286 58.0
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 3.0e-90 335.9 271 59.0
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 1.1e-89 334.0 234 68.8
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 2.1e-88 329.7 224 67.0
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 1.1e-87 327.4 224 65.6
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 4.5e-86 322.0 271 57.6
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 1.3e-85 320.5 279 56.3
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 4.9e-85 318.5 271 53.9
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 4.9e-85 318.5 235 65.1
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 2.1e-83 313.2 283 53.7
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 1.3e-82 310.5 267 54.7
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 3.9e-82 308.9 274 54.0
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.1e-81 307.4 276 54.3
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 3.3e-81 305.8 181 82.9
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 3.7e-80 302.4 224 61.6
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 2.4e-79 299.7 273 54.2
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 5.3e-79 298.5 271 52.8
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 7.6e-78 294.7 265 52.5
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 3.8e-77 292.4 278 55.0
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 2.3e-74 283.1 280 49.3
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 1.1e-73 280.8 283 49.1
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 4.3e-73 278.9 186 69.4
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 6.9e-71 271.6 231 56.7
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 2.2e-69 266.5 188 64.9
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 5.5e-68 261.9 176 69.9
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 4.1e-63 245.7 275 43.3
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 9.1e-63 244.6 329 41.0
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 4.2e-60 235.7 164 68.3
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 2.1e-59 233.4 276 43.5
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 1.5e-57 227.3 189 56.6
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 5.7e-57 225.3 170 62.9
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 9.7e-57 224.6 276 40.9
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 6.3e-48 195.3 133 63.9
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 2.4e-47 193.4 249 42.6
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.7e-45 187.2 135 63.0
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 3.8e-45 186.0 228 43.9
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 8.8e-42 174.9 283 33.9
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 1.3e-37 161.0 166 51.2
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 6.5e-37 158.7 108 64.8
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 1.1e-36 157.9 148 54.1
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 2.7e-35 153.3 309 33.0
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 1.5e-28 131.0 85 67.1
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 4.0e-26 122.9 124 51.6
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 2.7e-22 110.2 84 69.0
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 3.3e-20 103.2 235 31.1
Lj6g0000477 Lotus japonicus HOM05D007318 ORTHO05D009289 1.3e-16 91.3 81 59.3
SEGI_12071 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 9.2e-15 85.1 117 38.5
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 1.1e-12 78.2 255 27.5
Oeu017686.1 Olea europaea HOM05D005118 ORTHO05D006038 1.1e-10 71.6 262 27.9
MD12G1027200 Malus domestica HOM05D005118 ORTHO05D006038 2.3e-10 70.5 256 25.8
Phvul.007G152100 Phaseolus vulgaris HOM05D005118 ORTHO05D006038 2.3e-10 70.5 240 27.1
AUR62037021 Chenopodium quinoa HOM05D005118 ORTHO05D006038 5.2e-10 69.3 220 26.8
MELO3C011647.2 Cucumis melo HOM05D005118 ORTHO05D006038 5.2e-10 69.3 161 31.1
AT3G11470 Arabidopsis thaliana HOM05D005118 ORTHO05D006038 6.8e-10 68.9 226 27.4
Sc02g0000340 Simmondsia chinensis HOM05D005118 ORTHO05D006038 6.8e-10 68.9 252 23.8
Sed0011362 Sechium edule HOM05D005118 ORTHO05D006038 8.9e-10 68.6 161 31.1
CsaV3_6G003860 Cucumis sativus L. HOM05D005118 ORTHO05D006038 2.0e-09 67.4 161 31.1
CARHR145210 Cardamine hirsuta HOM05D005118 ORTHO05D006038 4.4e-09 66.2 195 25.6
Sabra16G0082800 Salix brachista HOM05D005118 ORTHO05D006038 4.4e-09 66.2 191 26.7
Dinv21195 Davidia involucrata HOM05D005118 ORTHO05D006038 7.5e-09 65.5 191 26.7
Sabra06G0162900 Salix brachista HOM05D005118 ORTHO05D006038 7.5e-09 65.5 260 25.0
AL3G23010 Arabidopsis lyrata HOM05D005118 ORTHO05D006038 9.8e-09 65.1 252 24.6
Migut.J01020 Erythranthe guttata HOM05D005118 ORTHO05D006038 9.8e-09 65.1 223 27.8
SalBow3G3316 Salvia bowleyana HOM05D005118 ORTHO05D006038 9.8e-09 65.1 258 26.4
EL10Ac7g16902 Beta vulgaris HOM05D001354 ORTHO05D007486 1.3e-08 64.7 221 26.2
BcaB06g25621 Brassica carinata HOM05D005118 ORTHO05D006038 1.3e-08 64.7 240 25.0
Psat6g079520 Pisum sativum HOM05D005118 ORTHO05D006038 1.3e-08 64.7 264 23.9
ClCG08G004490 Citrullus lanatus HOM05D005118 ORTHO05D006038 1.7e-08 64.3 161 31.1
MBI14_g17373_MAGBIO Magnolia biondii HOM05D005118 ORTHO05D006038 1.7e-08 64.3 231 26.8
Nn2g14484 Nelumbo nucifera HOM05D005118 ORTHO05D006038 1.7e-08 64.3 256 25.0
Carub.0005s0168 Capsella rubella HOM05D005118 ORTHO05D006038 2.2e-08 63.9 243 26.3
ECA247G3083 Erigeron canadensis HOM05D005118 ORTHO05D006038 2.2e-08 63.9 227 24.2
Os08g0243100 Oryza sativa ssp. japonica HOM05D005118 ORTHO05D006038 2.2e-08 63.9 234 25.6
FAN02G2546 Fragaria x ananassa HOM05D005118 ORTHO05D006038 2.9e-08 63.5 218 25.7
Peaxi162Scf00102g00213 Petunia axillaris HOM05D005118 ORTHO05D006038 2.9e-08 63.5 244 24.6
Prupe.7G104300 Prunus persica HOM05D005118 ORTHO05D006038 2.9e-08 63.5 219 25.1
CAN.G397.66 Capsicum annuum HOM05D005118 ORTHO05D006038 4.9e-08 62.8 243 25.1
TAR636G1493 Trochodendron aralioides HOM05D007318 ORTHO05D009289 6.4e-08 62.4 56 55.4
Atru.chr8.1478 Acer truncatum HOM05D005118 ORTHO05D006038 8.3e-08 62.0 221 26.2
BraA05t22581Z Brassica rapa HOM05D005118 ORTHO05D006038 8.3e-08 62.0 213 25.4
arahy.Tifrunner.gnm1.ann1.72V09J Arachis hypogaea HOM05D005118 ORTHO05D006038 1.1e-07 61.6 255 23.9
arahy.Tifrunner.gnm1.ann1.W1QNQS Arachis hypogaea HOM05D005118 ORTHO05D006038 1.1e-07 61.6 255 23.9
BcaC05g29371 Brassica carinata HOM05D005118 ORTHO05D006038 1.1e-07 61.6 234 24.8
CiPaw.09G015400 Carya illinoinensis HOM05D005118 ORTHO05D006038 1.1e-07 61.6 161 28.0
FAN09G1525 Fragaria x ananassa HOM05D005118 ORTHO05D006038 1.1e-07 61.6 216 25.5
TWI77G0553 Tripterygium wilfordii HOM05D005118 ORTHO05D006038 1.1e-07 61.6 161 28.0
AL5G11970 Arabidopsis lyrata HOM05D005118 ORTHO05D006038 1.4e-07 61.2 164 27.4
Aa31LG3G4830 Aethionema arabicum HOM05D005118 ORTHO05D006038 1.9e-07 60.8 164 27.4
C05p56660 Brassica napus HOM05D005118 ORTHO05D006038 1.9e-07 60.8 218 24.8
BolC5t34331H Brassica oleracea HOM05D005118 ORTHO05D006038 1.9e-07 60.8 218 24.8
Thhalv10018973m.g Eutrema salsugineum HOM05D005118 ORTHO05D006038 1.9e-07 60.8 242 26.0
FvH4_6g19140 Fragaria vesca HOM05D005118 ORTHO05D006038 1.9e-07 60.8 213 26.8
FAN14G1754 Fragaria x ananassa HOM05D005118 ORTHO05D006038 1.9e-07 60.8 213 26.8
SGA_v2.0_scaffold31G12903 Striga asiatica HOM05D005118 ORTHO05D006038 1.9e-07 60.8 186 26.9
TAR365G0960 Trochodendron aralioides HOM05D005118 ORTHO05D006038 1.9e-07 60.8 224 27.7
ATR0618G287 Amborella trichopoda HOM05D005118 ORTHO05D006038 2.4e-07 60.5 212 25.5
CSS0000835 Camellia sinensis var. sinensis HOM05D005118 ORTHO05D006038 2.4e-07 60.5 162 29.0
FAN05G3536 Fragaria x ananassa HOM05D005118 ORTHO05D006038 2.4e-07 60.5 216 25.0
Gohir.A01G205500 Gossypium hirsutum HOM05D005118 ORTHO05D006038 2.4e-07 60.5 159 28.9
Lalb_Chr10g0096391 Lupinus albus HOM05D005118 ORTHO05D006038 2.4e-07 60.5 161 28.6
Potri.006G211300 Populus trichocarpa HOM05D005118 ORTHO05D006038 2.4e-07 60.5 110 34.5
GSVIVG01016776001 Vitis vinifera HOM05D005118 ORTHO05D006038 2.4e-07 60.5 225 24.4
Glyma.13G154600 Glycine max HOM05D005118 ORTHO05D006038 3.2e-07 60.1 161 29.8
MBI13_g44208_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 3.2e-07 60.1 37 70.3
THA.LOC104816589 Tarenaya hassleriana HOM05D005118 ORTHO05D006038 3.2e-07 60.1 222 25.2
Nitab4.5_0001933g0040 Nicotiana tabacum HOM05D005118 ORTHO05D006038 4.1e-07 59.7 270 25.2
Gorai.002G239100 Gossypium raimondii HOM05D005118 ORTHO05D006038 5.4e-07 59.3 159 28.3
DCAR_013399 Daucus carota HOM05D005118 ORTHO05D006038 7.1e-07 58.9 269 23.8
HPP92_018124 Vanilla planifolia HOM05D005118 ORTHO05D006038 7.1e-07 58.9 247 26.3
Gohir.D01G195000 Gossypium hirsutum HOM05D005118 ORTHO05D006038 9.2e-07 58.5 159 28.3
RcHm_v2.0_Chr3g0474251 Rosa chinensis HOM05D005118 ORTHO05D006038 9.2e-07 58.5 158 29.1
VMungo1309G0892 Vigna mungo HOM05D005118 ORTHO05D006038 9.2e-07 58.5 161 29.2
A05p37870 Brassica napus HOM05D005118 ORTHO05D006038 1.2e-06 58.2 216 24.5
Lsat_1_v5_gn_9_20681 Lactuca sativa HOM05D005118 ORTHO05D006038 1.2e-06 58.2 235 23.0
PSO782G2273 Papaver somniferum HOM05D005118 ORTHO05D006038 1.2e-06 58.2 167 27.5
Solyc09g009960.3 Solanum lycopersicum HOM05D005118 ORTHO05D006038 1.2e-06 58.2 224 25.4
TWI53G1403 Tripterygium wilfordii HOM05D005118 ORTHO05D006038 1.2e-06 58.2 141 27.7
Lj6g0000791 Lotus japonicus HOM05D005118 ORTHO05D006038 1.6e-06 57.8 155 27.7
Lj6g0018590 Lotus japonicus HOM05D005118 ORTHO05D006038 1.6e-06 57.8 155 27.7
TPR.G2549 Trifolium pratense HOM05D005118 ORTHO05D006038 1.6e-06 57.8 221 24.9
Thecc.05G091100 Theobroma cacao HOM05D005118 ORTHO05D006038 2.1e-06 57.4 159 28.3
Duzib093G2169 Durio zibethinus HOM05D005118 ORTHO05D006038 2.7e-06 57.0 127 29.1
COL.COLO4_29702 Corchorus olitorius HOM05D005118 ORTHO05D006038 3.5e-06 56.6 159 27.7
CANSAT64G1535 Cannabis sativa HOM05D005118 ORTHO05D006038 4.6e-06 56.2 159 26.4
PSO063G5626 Papaver somniferum HOM05D005118 ORTHO05D006038 4.6e-06 56.2 152 28.3
Rhsim03G0072700 Rhododendron simsii HOM05D005118 ORTHO05D006038 4.6e-06 56.2 162 29.6
Oeu056875.2 Olea europaea HOM05D005118 ORTHO05D006038 7.8e-06 55.5 221 25.3


User provided reference genes

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