Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 6.3e-268 926.8 439 100.0
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 4.1e-251 870.9 439 93.8
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 2.3e-238 828.6 440 88.4
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 5.9e-218 760.8 444 81.5
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 6.6e-217 757.3 438 82.0
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 4.0e-214 748.0 436 81.7
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 6.4e-212 740.7 437 81.7
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 4.6e-210 734.6 428 80.6
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 1.4e-206 723.0 439 78.8
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 1.2e-202 709.9 433 77.6
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 4.7e-199 698.0 438 76.7
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 2.7e-194 682.2 425 75.8
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 4.6e-194 681.4 430 74.4
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 6.6e-193 677.6 422 74.4
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.9e-192 676.0 423 73.8
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 7.3e-192 674.1 423 73.8
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 3.6e-191 671.8 431 72.6
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 1.1e-190 670.2 430 72.3
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 1.4e-190 669.8 432 72.7
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 6.8e-190 667.5 435 73.6
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 5.8e-189 664.5 431 72.4
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 2.2e-188 662.5 423 72.8
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 7.1e-187 657.5 425 72.5
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 2.7e-186 655.6 432 70.6
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 2.7e-186 655.6 423 71.6
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 6.0e-186 654.4 435 70.8
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 7.8e-186 654.1 428 70.6
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 1.3e-185 653.3 429 70.9
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.3e-185 652.5 423 71.4
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.9e-185 651.7 426 70.7
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.9e-185 651.7 426 70.7
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 1.1e-184 650.2 437 71.6
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.5e-184 649.8 423 72.3
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 2.5e-184 649.0 429 72.0
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 3.3e-184 648.7 412 72.6
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 5.6e-184 647.9 426 71.4
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.6e-183 646.4 425 70.6
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 2.1e-183 646.0 433 70.9
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 2.1e-183 646.0 438 68.9
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 2.8e-183 645.6 426 70.7
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 8.1e-183 644.0 433 69.3
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.1e-182 642.1 426 70.4
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 5.3e-182 641.3 424 69.3
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 1.2e-181 640.2 424 71.0
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 1.5e-181 639.8 424 71.5
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 2.0e-181 639.4 433 68.8
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 3.4e-181 638.6 429 68.5
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 4.4e-181 638.3 433 68.6
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 7.6e-181 637.5 425 69.6
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 9.9e-181 637.1 421 68.9
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 1.4e-179 633.3 431 69.8
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 4.2e-179 631.7 424 68.6
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 9.3e-179 630.6 427 69.6
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 1.2e-178 630.2 424 68.4
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 2.1e-178 629.4 427 68.4
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 2.7e-178 629.0 416 69.7
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 3.5e-178 628.6 414 69.3
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 4.6e-178 628.2 423 67.1
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 6.0e-178 627.9 432 68.1
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 7.8e-178 627.5 422 68.7
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 1.0e-177 627.1 432 68.3
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 5.1e-177 624.8 427 68.6
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 5.1e-177 624.8 428 69.2
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 5.1e-177 624.8 430 67.9
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 5.1e-177 624.8 427 67.9
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 6.6e-177 624.4 355 77.2
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 1.1e-176 623.6 433 68.1
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 1.5e-176 623.2 419 70.2
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 1.9e-176 622.9 419 70.4
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 4.3e-176 621.7 420 68.6
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 1.3e-175 620.2 433 67.9
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 1.1e-174 617.1 429 66.7
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 6.9e-174 614.4 419 69.2
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 3.4e-173 612.1 444 65.8
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 7.6e-173 610.9 440 67.3
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 1.3e-172 610.1 434 67.1
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 1.3e-172 610.1 434 66.6
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 1.7e-172 609.8 427 67.7
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 2.2e-172 609.4 433 65.4
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 2.9e-172 609.0 419 67.3
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 8.4e-172 607.4 417 68.3
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 1.1e-171 607.1 366 74.6
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 1.9e-171 606.3 427 68.1
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 2.4e-171 605.9 417 68.1
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 2.4e-171 605.9 418 68.4
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 3.2e-171 605.5 415 67.7
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 4.2e-171 605.1 415 67.2
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 5.4e-171 604.7 423 66.2
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 9.3e-171 604.0 423 66.0
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.6e-170 603.2 428 66.8
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 1.6e-170 603.2 346 77.7
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 2.3e-169 599.4 356 75.0
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 3.9e-169 598.6 418 66.5
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 3.9e-169 598.6 418 66.5
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.1e-168 597.0 426 67.6
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 5.6e-168 594.7 428 64.5
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 1.6e-167 593.2 351 74.1
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 1.8e-166 589.7 288 91.0
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 9.0e-166 587.4 344 75.3
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 5.8e-165 584.7 419 65.4
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 9.3e-163 577.4 385 66.8
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 4.6e-162 575.1 342 73.7
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 7.9e-162 574.3 413 66.6
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 1.8e-161 573.2 429 63.6
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 1.6e-159 566.6 355 70.4
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.8e-159 565.8 419 64.0
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 3.7e-159 565.5 416 64.9
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 4.8e-159 565.1 438 62.3
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 2.4e-158 562.8 355 70.4
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 7.6e-157 557.8 356 69.9
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 2.2e-151 539.7 451 57.6
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 8.2e-151 537.7 433 61.2
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 2.6e-149 532.7 412 61.2
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 5.5e-147 525.0 283 79.2
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 2.3e-145 519.6 362 63.8
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 7.7e-141 504.6 358 62.6
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 1.7e-132 476.9 357 59.9
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 5.5e-131 471.9 357 61.1
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 2.4e-118 429.9 322 64.3
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 1.1e-99 367.9 211 75.8
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 5.6e-99 365.5 215 71.6
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 8.0e-98 361.7 356 51.1
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.8e-97 360.5 209 75.6
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 1.1e-91 341.3 277 56.3
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 1.3e-63 248.1 258 53.9
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 1.4e-54 218.0 400 38.8
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 5.7e-27 126.3 95 56.8
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 1.1e-25 122.1 90 61.1
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 1.8e-25 121.3 58 86.2
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.8e-17 94.7 113 43.4
Aa31LG8G11530 Aethionema arabicum HOM05D006015 ORTHO05D059074 3.2e-06 57.4 77 44.2


User provided reference genes

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