Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 8.5e-146 520.4 277 100.0
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 9.8e-134 480.3 277 92.8
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 3.5e-123 445.3 282 85.5
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.2e-112 410.2 277 79.1
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.4e-111 406.8 277 77.6
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 4.4e-110 401.7 276 76.1
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 7.5e-110 401.0 272 76.8
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 1.3e-109 400.2 273 77.7
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 5.4e-108 394.8 273 76.6
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 7.1e-108 394.4 268 78.0
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 1.6e-107 393.3 274 75.5
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 6.0e-107 391.3 274 75.2
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 1.3e-101 373.6 271 71.2
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 2.9e-101 372.5 272 72.8
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 3.7e-101 372.1 272 72.8
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 3.7e-101 372.1 269 71.4
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 4.9e-101 371.7 273 71.8
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 1.1e-100 370.5 274 71.5
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 2.4e-100 369.4 268 71.6
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 3.2e-100 369.0 274 70.1
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 5.4e-100 368.2 274 70.1
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 5.4e-100 368.2 267 73.0
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 1.6e-99 366.7 275 69.8
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 1.6e-99 366.7 274 69.7
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 7.8e-99 364.4 274 68.6
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 1.0e-98 364.0 268 72.0
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 1.0e-98 364.0 270 71.1
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 1.7e-98 363.2 281 69.0
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 3.0e-98 362.5 270 70.0
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 8.6e-98 360.9 268 70.1
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 1.9e-97 359.8 271 67.9
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 3.3e-97 359.0 270 68.5
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 5.6e-97 358.2 269 69.9
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 5.6e-97 358.2 273 68.5
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 9.6e-97 357.5 274 67.2
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 1.2e-96 357.1 274 67.9
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 1.6e-96 356.7 271 69.4
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.6e-96 356.7 271 70.5
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 1.6e-96 356.7 274 66.8
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 2.1e-96 356.3 272 69.1
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 2.8e-96 355.9 271 67.2
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 4.7e-96 355.1 274 66.8
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.7e-96 355.1 274 67.5
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 4.7e-96 355.1 274 69.0
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 8.1e-96 354.4 274 67.5
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 1.1e-95 354.0 270 70.0
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.4e-95 353.6 273 67.0
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 1.4e-95 353.6 275 68.4
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.4e-95 353.6 274 68.6
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.4e-95 353.6 268 69.8
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 1.8e-95 353.2 273 67.0
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.8e-95 353.2 272 68.4
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 3.1e-95 352.4 269 68.0
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 8.9e-95 350.9 273 66.7
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 1.5e-94 350.1 271 66.8
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 2.6e-94 349.4 274 67.9
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 5.8e-94 348.2 273 66.3
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 2.2e-93 346.3 267 67.0
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 6.4e-93 344.7 271 68.3
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 8.4e-93 344.4 279 66.7
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 8.4e-93 344.4 268 66.8
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 3.2e-92 342.4 273 63.7
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 4.2e-92 342.0 269 66.5
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 4.2e-92 342.0 268 68.7
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 5.4e-92 341.7 278 66.5
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 1.2e-91 340.5 269 65.8
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 2.1e-91 339.7 267 65.5
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 2.7e-91 339.3 278 65.5
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 2.7e-91 339.3 272 65.8
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 3.0e-90 335.9 269 64.7
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 5.1e-90 335.1 269 66.5
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 8.7e-90 334.3 273 64.1
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.1e-89 334.0 269 65.1
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 1.5e-89 333.6 266 66.2
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 1.9e-89 333.2 269 65.1
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 2.5e-89 332.8 323 58.2
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 5.6e-89 331.6 268 65.7
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 1.6e-88 330.1 275 64.0
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 2.1e-88 329.7 269 64.7
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 2.1e-88 329.7 269 64.7
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 8.1e-88 327.8 275 65.1
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 6.9e-87 324.7 273 64.1
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 2.6e-86 322.8 245 71.4
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 8.4e-85 317.8 241 71.0
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 2.4e-84 316.2 273 63.4
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.6e-83 313.5 275 60.4
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 3.5e-83 312.4 269 62.5
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 3.9e-82 308.9 272 60.7
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.9e-81 306.6 241 68.5
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 1.3e-80 303.9 234 67.5
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 5.3e-79 298.5 273 58.2
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.2e-78 297.4 262 58.8
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 2.0e-78 296.6 225 69.8
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 7.6e-78 294.7 282 58.2
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 1.7e-77 293.5 268 56.3
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 2.4e-76 289.7 225 67.1
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 9.3e-76 287.7 241 63.5
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 2.7e-75 286.2 234 62.8
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 3.5e-75 285.8 263 60.5
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 8.1e-72 274.6 390 44.6
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 6.5e-69 265.0 271 55.7
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 7.4e-65 251.5 276 52.2
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 5.9e-62 241.9 237 57.0
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 2.9e-61 239.6 185 70.8
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 2.5e-60 236.5 221 60.6
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 1.0e-58 231.1 266 51.5
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 6.3e-56 221.9 219 57.5
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 6.3e-48 195.3 150 66.7
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.4e-46 189.5 132 71.2
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 1.2e-43 181.0 128 67.2
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 3.9e-42 176.0 147 61.2
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 5.2e-42 175.6 183 56.8
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 7.0e-39 165.2 121 71.1
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.2e-38 164.5 148 66.2
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 2.2e-37 160.2 130 69.2
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 7.2e-28 128.6 211 43.1
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 1.2e-25 121.3 113 59.3
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 3.4e-25 119.8 128 58.6
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.0e-21 108.2 80 72.5
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 8.5e-21 105.1 252 32.5
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.5e-20 104.4 80 68.8
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 5.4e-15 85.9 51 84.3
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 1.7e-08 64.3 110 39.1
Psat2g006760 Pisum sativum HOM05D001260 ORTHO05D004134 4.1e-07 59.7 32 93.8


User provided reference genes

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