Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 2.9e-122 441.8 212 100.0
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 4.0e-111 404.8 211 92.4
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 2.4e-108 395.6 211 90.5
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 3.5e-107 391.7 211 89.6
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 4.6e-99 364.8 212 80.2
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 9.6e-97 357.1 208 78.8
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 1.2e-96 356.7 212 77.4
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 1.6e-96 356.3 212 78.8
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 1.4e-95 353.2 209 78.0
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 1.8e-95 352.8 209 79.4
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 1.8e-95 352.8 211 77.3
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 3.1e-95 352.1 211 78.2
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 5.2e-95 351.3 212 77.4
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 5.2e-95 351.3 208 77.4
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 5.2e-95 351.3 208 77.4
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 6.8e-95 350.9 211 78.7
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 8.9e-95 350.5 209 76.6
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 1.2e-94 350.1 208 76.9
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 1.2e-94 350.1 208 76.9
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 1.5e-94 349.7 211 76.8
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 2.0e-94 349.4 208 77.4
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 2.0e-94 349.4 211 76.8
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 2.0e-94 349.4 211 77.3
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 3.4e-94 348.6 211 76.8
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 3.4e-94 348.6 208 77.9
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 3.4e-94 348.6 212 76.9
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 3.4e-94 348.6 211 77.3
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 4.4e-94 348.2 211 74.9
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 4.4e-94 348.2 205 79.5
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 5.8e-94 347.8 211 75.8
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 9.9e-94 347.1 211 75.4
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 1.3e-93 346.7 211 77.3
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 1.7e-93 346.3 209 77.0
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 2.9e-93 345.5 208 75.5
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 2.9e-93 345.5 211 75.8
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 2.9e-93 345.5 211 76.3
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 3.8e-93 345.1 211 75.8
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 4.9e-93 344.7 209 76.6
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 6.4e-93 344.4 211 75.8
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 6.4e-93 344.4 211 73.5
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 8.4e-93 344.0 208 75.5
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 1.4e-92 343.2 209 75.1
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 1.4e-92 343.2 211 75.8
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 1.9e-92 342.8 235 71.1
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 1.9e-92 342.8 209 76.1
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 1.9e-92 342.8 208 76.4
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 2.4e-92 342.4 208 76.4
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 3.2e-92 342.0 209 74.6
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 5.4e-92 341.3 211 73.9
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 7.1e-92 340.9 198 79.8
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 1.2e-91 340.1 211 75.4
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 1.6e-91 339.7 212 73.6
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 2.1e-91 339.3 211 75.4
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 2.7e-91 339.0 211 74.4
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 2.7e-91 339.0 211 75.4
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 3.5e-91 338.6 209 74.6
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 4.6e-91 338.2 211 73.9
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 4.6e-91 338.2 208 73.6
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 4.6e-91 338.2 210 72.4
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 7.8e-91 337.4 210 72.9
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 7.8e-91 337.4 209 73.2
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 7.8e-91 337.4 204 74.5
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 7.8e-91 337.4 208 75.0
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.0e-90 337.0 211 75.4
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 1.0e-90 337.0 209 75.6
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 1.3e-90 336.7 211 73.0
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 1.3e-90 336.7 209 72.7
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.7e-90 336.3 211 74.9
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 1.7e-90 336.3 208 73.1
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 3.9e-90 335.1 210 72.4
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 3.9e-90 335.1 199 76.4
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 3.9e-90 335.1 208 74.5
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 5.1e-90 334.7 209 74.2
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 6.6e-90 334.3 208 73.6
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 6.6e-90 334.3 208 73.6
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 1.1e-89 333.6 209 73.2
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 1.1e-89 333.6 199 76.4
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 1.1e-89 333.6 199 74.9
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 1.5e-89 333.2 202 74.8
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 1.5e-89 333.2 211 72.5
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 2.5e-89 332.4 208 73.1
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 2.5e-89 332.4 209 73.2
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 3.3e-89 332.0 210 71.4
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 3.3e-89 332.0 208 71.6
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 3.3e-89 332.0 205 75.6
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 3.3e-89 332.0 211 73.5
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 4.3e-89 331.6 210 71.4
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 4.3e-89 331.6 208 73.1
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 4.3e-89 331.6 209 72.2
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 7.3e-89 330.9 211 73.0
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 9.6e-89 330.5 211 72.5
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 2.1e-88 329.3 199 75.9
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 2.8e-88 328.9 208 70.7
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 3.6e-88 328.6 211 72.5
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 6.2e-88 327.8 211 72.5
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 1.1e-87 327.0 211 72.0
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 1.1e-87 327.0 211 71.1
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 1.4e-87 326.6 211 70.1
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 2.4e-87 325.9 209 71.3
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 1.2e-86 323.6 198 74.7
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 2.6e-86 322.4 206 72.3
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 4.4e-86 321.6 193 75.6
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 5.8e-86 321.2 207 69.6
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 1.1e-84 317.0 202 71.3
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 3.2e-84 315.5 217 69.6
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 3.5e-83 312.0 228 64.5
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 3.5e-83 312.0 203 70.9
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 3.5e-83 312.0 204 69.6
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 4.6e-83 311.6 208 69.2
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 1.3e-82 310.1 203 70.0
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 1.3e-82 310.1 207 66.2
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 2.3e-82 309.3 205 68.3
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 1.5e-81 306.6 251 62.2
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 9.9e-78 293.9 213 67.1
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 9.9e-78 293.9 294 51.7
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 2.9e-77 292.4 166 80.7
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 4.9e-77 291.6 176 77.8
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 6.4e-77 291.2 199 68.8
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 5.4e-76 288.1 174 78.2
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 6.2e-64 248.1 145 77.9
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 1.8e-63 246.5 145 75.9
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 2.4e-63 246.1 427 37.5
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 6.9e-63 244.6 145 76.6
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 1.0e-61 240.7 178 65.7
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 1.6e-59 233.4 208 56.7
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 4.5e-54 215.3 140 69.3
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 3.6e-51 205.7 113 82.3
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 8.2e-48 194.5 192 49.0
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 6.9e-47 191.4 196 49.5
Ca_25655_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 1.1e-44 184.1 125 69.6
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 2.2e-40 169.9 202 45.5
Potri.008G019325 Populus trichocarpa HOM05D005215 ORTHO05D006382 2.4e-39 166.4 109 73.4
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 6.5e-37 158.3 167 50.3
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 3.0e-34 149.4 84 76.2
Sc06g0000010 Simmondsia chinensis HOM05D005215 ORTHO05D006382 3.1e-31 139.4 96 69.8
Dinv02216 Davidia involucrata HOM05D005215 ORTHO05D006382 1.6e-30 137.1 74 81.1
BcaNung04832 Brassica carinata HOM05D005215 ORTHO05D006382 2.9e-29 132.9 100 62.0
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 3.6e-27 125.9 79 74.7
Lalb_Chr02g0146221 Lupinus albus HOM05D005215 ORTHO05D006382 6.5e-21 105.1 67 74.6
Lalb_Chr06g0166351 Lupinus albus HOM05D005215 ORTHO05D006382 1.1e-20 104.4 74 64.9
unitig_88.g27811 Utricularia gibba HOM05D005215 ORTHO05D006382 6.8e-18 95.1 64 67.2
Sabra16G0322800 Salix brachista HOM05D005215 ORTHO05D006382 7.5e-17 91.7 76 61.8
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 5.9e-14 82.0 53 73.6
Peaxi162Scf00959g00416 Petunia axillaris HOM05D005215 ORTHO05D006382 4.0e-10 69.3 40 85.0
GSVIVG01037606001 Vitis vinifera HOM05D005215 ORTHO05D014194 1.5e-09 67.4 35 77.1
Migut.F00867 Erythranthe guttata HOM05D012249 ORTHO05D014194 2.4e-07 60.1 35 71.4
Peaxi162Scf00959g00417 Petunia axillaris HOM05D005215 ORTHO05D306904 2.4e-07 60.1 59 57.6


User provided reference genes

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