Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 3.0e-244 848.2 469 100.0
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 8.1e-189 664.1 435 83.4
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 4.8e-157 558.5 430 74.7
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 4.9e-154 548.5 422 74.2
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 6.5e-130 468.4 474 61.2
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 1.1e-129 467.6 483 60.7
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 5.9e-123 445.3 474 59.5
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 3.4e-118 429.5 471 58.2
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 2.2e-109 400.2 485 55.5
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 1.2e-107 394.4 481 55.1
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 2.2e-93 347.1 503 48.9
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 6.4e-93 345.5 455 52.1
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 7.8e-83 312.0 501 45.5
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 2.5e-81 307.0 508 45.3
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 1.1e-79 301.6 518 44.0
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 1.4e-79 301.2 502 44.8
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 5.2e-79 299.3 471 51.2
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 4.4e-78 296.2 504 46.6
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 1.4e-76 291.2 482 43.8
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 1.4e-76 291.2 507 44.6
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 1.7e-74 284.3 528 41.7
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.8e-71 274.2 497 42.9
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.2e-70 271.6 484 43.0
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 4.4e-70 269.6 511 43.6
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 4.9e-69 266.2 501 42.7
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 8.4e-69 265.4 462 44.4
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 1.1e-68 265.0 520 41.5
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 3.2e-68 263.5 499 47.9
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 1.2e-67 261.5 496 42.5
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 7.8e-67 258.8 503 46.9
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.7e-66 257.7 497 41.9
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 3.1e-63 246.9 483 41.8
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 3.1e-63 246.9 490 39.0
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 3.8e-61 240.0 547 38.6
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 9.3e-60 235.3 484 41.1
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 5.6e-57 226.1 484 38.6
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 9.6e-57 225.3 481 40.1
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 3.6e-56 223.4 497 40.8
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 8.1e-56 222.2 480 39.0
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 8.1e-56 222.2 480 39.0
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 6.9e-55 219.2 443 40.0
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 2.6e-54 217.2 466 40.6
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 6.4e-53 212.6 469 39.4
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 2.4e-52 210.7 449 40.8
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 3.2e-52 210.3 445 40.7
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 4.2e-52 209.9 448 38.4
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 4.2e-52 209.9 507 38.5
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 4.2e-52 209.9 469 39.2
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 2.1e-51 207.6 514 39.1
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.3e-50 204.9 279 50.9
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 5.1e-50 203.0 479 40.7
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 8.7e-50 202.2 529 37.6
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 1.1e-49 201.8 464 39.4
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 9.6e-49 198.7 501 36.9
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 1.6e-48 198.0 477 37.1
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 3.7e-48 196.8 504 36.9
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 6.2e-48 196.1 224 57.1
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 1.4e-47 194.9 529 36.3
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 2.4e-47 194.1 531 36.9
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 3.1e-47 193.7 471 38.9
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 5.3e-47 193.0 445 38.2
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 6.9e-47 192.6 428 41.1
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 6.9e-47 192.6 473 38.3
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 2.0e-46 191.0 447 41.4
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 2.0e-46 191.0 478 39.7
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 7.6e-46 189.1 440 37.7
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 3.8e-45 186.8 387 40.8
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 3.8e-45 186.8 451 44.1
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 8.4e-45 185.7 454 36.3
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 7.1e-44 182.6 475 37.1
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 1.3e-40 171.8 469 36.2
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.3e-40 171.8 469 35.4
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 2.1e-40 171.0 507 33.3
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 8.2e-40 169.1 474 41.8
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 8.2e-40 169.1 441 36.5
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 1.1e-39 168.7 540 33.5
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 2.4e-39 167.5 488 35.5
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 4.1e-39 166.8 470 40.4
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 4.1e-39 166.8 327 41.6
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 5.8e-38 162.9 467 36.0
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.3e-37 161.8 469 34.5
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 5.0e-37 159.8 123 66.7
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 6.5e-37 159.5 332 39.8
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 6.5e-37 159.5 219 51.1
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 8.4e-37 159.1 431 36.7
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 8.4e-37 159.1 124 65.3
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 1.9e-36 157.9 163 60.1
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 1.6e-35 154.8 160 57.5
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 9.7e-33 145.6 255 42.4
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 2.8e-32 144.1 428 33.2
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 1.1e-31 142.1 473 35.9
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 1.5e-30 138.3 628 29.3
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 7.7e-30 136.0 375 34.9
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 7.7e-30 136.0 512 32.0
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 1.3e-29 135.2 428 32.2
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 1.7e-29 134.8 441 35.8
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 1.7e-29 134.8 447 37.8
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.4e-28 131.7 173 49.1
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 1.9e-28 131.3 77 88.3
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 7.2e-28 129.4 455 31.2
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 4.6e-27 126.7 237 41.4
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 4.6e-27 126.7 441 35.4
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 4.6e-27 126.7 424 35.8
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 6.1e-27 126.3 396 35.1
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 3.3e-25 120.6 426 33.1
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 4.1e-23 113.6 419 31.7
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 4.1e-23 113.6 419 31.7
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 2.6e-22 110.9 445 32.8
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.1e-20 105.5 113 52.2
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 1.9e-20 104.8 421 31.6
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 4.2e-20 103.6 74 75.7
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 1.6e-19 101.7 588 28.4
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 2.6e-17 94.4 211 37.9
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 1.3e-16 92.0 309 33.3
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.1e-15 89.0 356 33.4
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 2.0e-14 84.7 308 33.1
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 2.0e-14 84.7 308 33.1
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 8.5e-13 79.3 63 63.5
VMungo0720G0679 Vigna mungo HOM05D006326 ORTHO05D007589 2.5e-12 77.8 48 81.2
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 8.0e-11 72.8 381 30.2
AT3G56720 Arabidopsis thaliana HOM05D006326 ORTHO05D007589 1.5e-09 68.6 368 33.7
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 7.5e-09 66.2 105 41.0


User provided reference genes

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