Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G233200 Phaseolus vulgaris HOM05D005911 ORTHO05D007565 1.2e-233 812.8 415 100.0
VMungo0720G1659 Vigna mungo HOM05D005911 ORTHO05D007565 7.6e-199 697.2 430 84.0
Glyma.20G019800 Glycine max HOM05D005911 ORTHO05D007565 2.7e-188 662.1 391 86.2
Lalb_Chr16g0385211 Lupinus albus HOM05D005911 ORTHO05D007565 1.1e-181 640.2 396 80.6
TPR.G20990 Trifolium pratense HOM05D005911 ORTHO05D007565 3.6e-180 635.2 418 78.5
Ca_18760_v3 Cicer arietinum L. HOM05D005911 ORTHO05D007565 2.4e-176 622.5 415 77.8
Medtr4g084100 Medicago truncatula HOM05D005911 ORTHO05D007565 3.1e-176 622.1 400 78.8
Lj4g0018405 Lotus japonicus HOM05D005911 ORTHO05D007565 5.0e-174 614.8 386 80.8
arahy.Tifrunner.gnm1.ann1.CA4G6V Arachis hypogaea HOM05D005911 ORTHO05D007565 1.2e-172 610.1 401 78.8
Psat3g133040 Pisum sativum HOM05D005911 ORTHO05D007565 1.7e-158 563.1 357 79.8
MD10G1080400 Malus domestica HOM05D005911 ORTHO05D007565 1.2e-143 513.8 393 66.7
QL11p042848 Quercus lobata HOM05D005911 ORTHO05D007565 5.0e-142 508.4 398 65.3
CiPaw.06G137300 Carya illinoinensis HOM05D005911 ORTHO05D007565 1.9e-141 506.5 400 64.5
Cfa005027 Carpinus fangiana HOM05D005911 ORTHO05D007565 3.6e-140 502.3 402 63.4
Dinv42087 Davidia involucrata HOM05D005911 ORTHO05D007565 2.3e-139 499.6 394 64.0
Prupe.8G101700 Prunus persica HOM05D005911 ORTHO05D007565 5.2e-139 498.4 409 61.6
TAR628G1003 Trochodendron aralioides HOM05D005911 ORTHO05D007565 6.8e-139 498.0 401 61.8
Atru.chr5.2957 Acer truncatum HOM05D005911 ORTHO05D007565 8.9e-139 497.7 399 63.4
Potri.004G152100 Populus trichocarpa HOM05D005911 ORTHO05D007565 2.0e-138 496.5 401 62.3
CSS0013374 Camellia sinensis var. sinensis HOM05D005911 ORTHO05D007565 2.4e-136 489.6 404 60.4
RcHm_v2.0_Chr6g0263461 Rosa chinensis HOM05D005911 ORTHO05D007565 2.7e-135 486.1 408 61.3
Manes.17G099400 Manihot esculenta HOM05D005911 ORTHO05D007565 7.8e-135 484.6 410 59.8
FAN24G3462 Fragaria x ananassa HOM05D005911 ORTHO05D007565 1.0e-134 484.2 409 60.9
Actinidia17824 Actinidia chinensis HOM05D005911 ORTHO05D007565 3.0e-134 482.6 388 62.9
FvH4_2g08380 Fragaria vesca HOM05D005911 ORTHO05D007565 3.0e-134 482.6 409 60.6
TWI31G0066 Tripterygium wilfordii HOM05D005911 ORTHO05D007565 5.6e-133 478.4 398 61.1
Nn1g05068 Nelumbo nucifera HOM05D005911 ORTHO05D007565 9.5e-133 477.6 394 60.4
GSVIVG01024153001 Vitis vinifera HOM05D005911 ORTHO05D007565 2.1e-132 476.5 396 61.1
Thecc.02G123100 Theobroma cacao HOM05D005911 ORTHO05D007565 8.0e-132 474.6 388 60.6
Gohir.D04G144200 Gossypium hirsutum HOM05D005911 ORTHO05D007565 4.0e-131 472.2 391 60.4
Duzib248G0238 Durio zibethinus HOM05D005911 ORTHO05D007565 5.2e-131 471.9 393 60.1
Gorai.012G129800 Gossypium raimondii HOM05D005911 ORTHO05D007565 1.2e-130 470.7 391 60.1
Rhsim05G0076000 Rhododendron simsii HOM05D005911 ORTHO05D007565 7.5e-130 468.0 393 61.3
Cpa.g.sc62.118 Carica papaya HOM05D005911 ORTHO05D007565 3.2e-128 462.6 386 64.0
Sed0023974 Sechium edule HOM05D005911 ORTHO05D007565 1.6e-127 460.3 391 57.5
FAN20G0571 Fragaria x ananassa HOM05D005911 ORTHO05D007565 2.0e-127 459.9 373 61.7
Migut.N01227 Erythranthe guttata HOM05D005911 ORTHO05D007565 6.0e-127 458.4 393 59.3
COL.COLO4_32449 Corchorus olitorius HOM05D005911 ORTHO05D007565 2.3e-126 456.4 377 60.5
Nitab4.5_0001794g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 2.3e-126 456.4 386 60.9
ECA236G0345 Erigeron canadensis HOM05D005911 ORTHO05D007565 3.9e-126 455.7 388 61.6
MBI16_g17455_MAGBIO Magnolia biondii HOM05D005911 ORTHO05D007565 1.5e-125 453.8 381 61.2
MSTRG.20102 Avicennia marina HOM05D005911 ORTHO05D007565 2.5e-125 453.0 388 60.8
CsaV3_7G023300 Cucumis sativus L. HOM05D005911 ORTHO05D007565 3.3e-125 452.6 393 58.3
ClCG02G005220 Citrullus lanatus HOM05D005911 ORTHO05D007565 2.1e-124 449.9 393 57.5
Peaxi162Scf00016g00941 Petunia axillaris HOM05D005911 ORTHO05D007565 2.1e-124 449.9 392 59.2
Sopen01g051640 Solanum pennellii HOM05D005911 ORTHO05D007565 4.7e-124 448.7 391 58.6
Solyc01g109450.3 Solanum lycopersicum HOM05D005911 ORTHO05D007565 1.1e-123 447.6 391 58.3
DCAR_003638 Daucus carota HOM05D005911 ORTHO05D007565 1.8e-123 446.8 394 58.9
FAN15G1485 Fragaria x ananassa HOM05D005911 ORTHO05D007565 1.8e-123 446.8 393 58.8
Nitab4.5_0008989g0030 Nicotiana tabacum HOM05D005911 ORTHO05D007565 2.3e-123 446.4 385 59.7
CAN.G322.116 Capsicum annuum HOM05D005911 ORTHO05D007565 4.0e-123 445.7 391 58.6
Oeu014335.1 Olea europaea HOM05D005911 ORTHO05D007565 1.5e-122 443.7 379 61.7
SalBow3G0191 Salvia bowleyana HOM05D005911 ORTHO05D007565 2.0e-122 443.4 397 58.2
PGR042G3082 Punica granatum HOM05D005911 ORTHO05D009502 3.4e-122 442.6 408 57.1
PGSC0003DMG400025190 Solanum tuberosum HOM05D005911 ORTHO05D007565 1.7e-121 440.3 385 58.7
Aqoxy5G01675 Aquilegia oxysepala HOM05D005911 ORTHO05D007565 2.9e-121 439.5 396 57.8
Cc02_g17800 Coffea canephora HOM05D005911 ORTHO05D007565 1.1e-120 437.6 411 57.9
Sabra04G0100900 Salix brachista HOM05D005911 ORTHO05D007565 1.1e-120 437.6 421 55.6
HanXRQChr16g0504971 Helianthus annuus HOM05D005911 ORTHO05D007565 4.6e-119 432.2 388 58.2
EL10Ac9g21750 Beta vulgaris HOM05D005911 ORTHO05D007565 4.3e-117 425.6 393 53.4
AUR62011353 Chenopodium quinoa HOM05D005911 ORTHO05D007565 2.8e-116 422.9 383 55.4
Haze_02358 Corylus avellana HOM05D005911 ORTHO05D009502 1.1e-115 421.0 424 53.5
Sp1g36210 Schrenkiella parvula HOM05D005911 ORTHO05D007565 2.3e-115 419.9 386 56.7
Hund00288 Selenicereus undatus HOM05D005911 ORTHO05D007565 5.2e-115 418.7 395 53.4
AUR62016709 Chenopodium quinoa HOM05D005911 ORTHO05D007565 6.8e-115 418.3 383 55.4
Carub.0001s3853 Capsella rubella HOM05D005911 ORTHO05D007565 4.4e-114 415.6 386 56.2
vmacro19435 Vaccinium macrocarpon HOM05D005911 ORTHO05D007565 2.9e-113 412.9 393 55.0
THA.LOC104804910 Tarenaya hassleriana HOM05D005911 ORTHO05D007565 4.9e-113 412.1 395 55.9
SGA_v2.0_scaffold44G16630 Striga asiatica HOM05D005911 ORTHO05D007565 8.4e-113 411.4 419 54.4
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 9.2e-112 407.9 385 56.6
AL1G56310 Arabidopsis lyrata HOM05D005911 ORTHO05D007565 1.2e-111 407.5 386 55.7
BcaB02g11057 Brassica carinata HOM05D005911 ORTHO05D007565 1.2e-111 407.5 396 54.8
MELO3C012560.2 Cucumis melo HOM05D005911 ORTHO05D007565 1.6e-111 407.1 413 53.0
AT1G49350 Arabidopsis thaliana HOM05D005911 ORTHO05D007565 7.8e-111 404.8 386 55.2
Thhalv10011559m.g Eutrema salsugineum HOM05D005911 ORTHO05D007565 1.0e-110 404.4 387 55.6
Gohir.A04G104400 Gossypium hirsutum HOM05D005911 ORTHO05D007565 9.6e-109 397.9 395 52.7
ATR0733G150 Amborella trichopoda HOM05D005911 ORTHO05D007565 1.1e-107 394.4 382 54.5
BraA05t20973Z Brassica rapa HOM05D005911 ORTHO05D007565 1.1e-107 394.4 388 54.6
BcaC05g27521 Brassica carinata HOM05D005911 ORTHO05D007565 3.1e-107 392.9 388 54.9
C05p34650 Brassica napus HOM05D005911 ORTHO05D007565 8.9e-107 391.3 388 54.9
BolC5t32220H Brassica oleracea HOM05D005911 ORTHO05D007565 1.2e-106 391.0 388 54.9
A05p20650 Brassica napus HOM05D005911 ORTHO05D007565 1.5e-106 390.6 388 54.4
BcaC05g27500 Brassica carinata HOM05D005911 ORTHO05D007565 1.1e-104 384.4 388 54.1
CAN.G149.23 Capsicum annuum HOM05D005911 ORTHO05D007565 3.9e-102 375.9 382 50.8
Os05g0185700 Oryza sativa ssp. japonica HOM05D005911 ORTHO05D007565 8.7e-102 374.8 379 52.2
Ciclev10029888m.g Citrus clementina HOM05D005911 ORTHO05D007565 1.5e-101 374.0 329 60.5
Hma1.2p1_0066F.1_g036670 Hydrangea macrophylla HOM05D005911 ORTHO05D007565 1.5e-101 374.0 323 57.3
Lsat_1_v5_gn_7_89660 Lactuca sativa HOM05D005911 ORTHO05D007565 1.5e-101 374.0 392 54.6
Sc14g0001790 Simmondsia chinensis HOM05D005911 ORTHO05D007565 1.4e-99 367.5 377 53.1
Potri.004G151600 Populus trichocarpa HOM05D005911 ORTHO05D007565 3.1e-99 366.3 304 60.5
Nitab4.5_0000443g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 9.0e-99 364.8 383 53.5
BolC5t32198H Brassica oleracea HOM05D005911 ORTHO05D007565 2.9e-97 359.8 410 50.0
Eucgr.G00462 Eucalyptus grandis HOM05D005911 ORTHO05D007565 4.6e-95 352.4 338 55.3
Eucgr.G01900 Eucalyptus grandis HOM05D005911 ORTHO05D007565 2.5e-93 346.7 341 54.0
SEGI_31956 Sequoiadendron giganteum HOM05D005911 ORTHO05D007565 4.8e-92 342.4 387 50.1
Lj9A367G52 Lonicera japonica HOM05D005911 ORTHO05D007565 1.8e-91 340.5 287 59.6
C05p34970 Brassica napus HOM05D005911 ORTHO05D007565 3.5e-87 326.2 333 54.1
AL1G56510 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 7.4e-85 318.5 368 49.5
FAN27G2671 Fragaria x ananassa HOM05D005911 ORTHO05D007565 5.5e-80 302.4 390 45.4
unitig_22.g6840 Utricularia gibba HOM05D005911 ORTHO05D007565 7.9e-79 298.5 390 45.9
Zm00001eb346550 Zea mays HOM05D005911 ORTHO05D007565 1.9e-77 293.9 322 49.7
CDE02G3889 Ceratophyllum demersum HOM05D005911 ORTHO05D007565 4.5e-74 282.7 370 44.3
Sc14g0001910 Simmondsia chinensis HOM05D005911 ORTHO05D007565 2.9e-73 280.0 312 51.0
AagrBONN_evm.TU.Sc2ySwM_117.291 Anthoceros agrestis HOM05D005911 ORTHO05D007565 3.9e-70 269.6 357 44.3
Pp3c15_14160 Physcomitrium patens HOM05D005911 ORTHO05D007565 2.6e-66 256.9 391 39.9
CARHR039360 Cardamine hirsuta HOM05D005911 ORTHO05D007565 2.0e-61 240.7 250 51.2
CBR_g27891 Chara braunii HOM05D005911 ORTHO05D007565 8.5e-57 225.3 409 35.0
SGA_v2.0_scaffold55G19804 Striga asiatica HOM05D005911 ORTHO05D007565 1.4e-54 218.0 359 39.3
Mapoly0044s0080 Marchantia polymorpha HOM05D005911 ORTHO05D007565 5.3e-51 206.1 337 36.8
CARHR039340 Cardamine hirsuta HOM05D005911 ORTHO05D007565 2.6e-45 187.2 195 52.3
arahy.Tifrunner.gnm1.ann1.IUSJ9T Arachis hypogaea HOM05D005911 ORTHO05D007565 1.0e-41 175.3 376 35.4
Ah.01g006180 Amaranthus hybridus HOM05D002934 ORTHO05D003937 2.9e-41 173.7 188 50.0
Gorai.008G153200 Gossypium raimondii HOM05D005911 ORTHO05D007565 2.7e-39 167.2 151 54.3
A05p20720 Brassica napus HOM05D005911 ORTHO05D007565 2.6e-37 160.6 180 50.6
BraA05t20979Z Brassica rapa HOM05D005911 ORTHO05D007565 2.6e-37 160.6 180 50.6
MCO11G507 Micromonas commoda HOM05D005911 ORTHO05D007565 2.6e-37 160.6 375 31.7
Eucgr.G01892 Eucalyptus grandis HOM05D005911 ORTHO05D007565 7.7e-34 149.1 182 46.2
Nitab4.5_0000776g0050 Nicotiana tabacum HOM05D005911 ORTHO05D007565 4.2e-32 143.3 111 60.4
Cre17.g701100 Chlamydomonas reinhardtii HOM05D005911 ORTHO05D007565 1.2e-31 141.7 214 40.7
Eucgr.G00468 Eucalyptus grandis HOM05D005911 ORTHO05D007565 1.2e-31 141.7 160 47.5
PRCOL_00000481 Prasinoderma coloniale HOM05D005911 ORTHO05D007565 8.8e-30 135.6 356 29.5
TAR371G0586 Trochodendron aralioides HOM05D005911 ORTHO05D007565 3.7e-28 130.2 162 47.5
Ciclev10013569m.g Citrus clementina HOM05D005911 ORTHO05D007565 3.5e-26 123.6 73 82.2
CARHR039370 Cardamine hirsuta HOM05D005911 ORTHO05D007565 4.7e-23 113.2 128 51.6
AagrBONN_evm.TU.Sc2ySwM_228.5516 Anthoceros agrestis HOM05D005911 ORTHO05D007565 8.0e-23 112.5 123 43.1
Lj9A367G53 Lonicera japonica HOM05D005911 ORTHO05D007565 2.6e-21 107.5 79 68.4
Ciclev10003801m.g Citrus clementina HOM05D005911 ORTHO05D007565 7.5e-21 105.9 65 81.5
Ciclev10018182m.g Citrus clementina HOM05D005911 ORTHO05D007565 5.4e-19 99.8 73 72.6
TAR371G0927 Trochodendron aralioides HOM05D005911 ORTHO05D007565 3.0e-17 94.0 109 46.8
Sc14g0001900 Simmondsia chinensis HOM05D005911 ORTHO05D007565 6.6e-17 92.8 84 54.8
Gohir.D04G144225 Gossypium hirsutum HOM05D005911 ORTHO05D007565 1.8e-14 84.7 73 61.6
Gorai.012G129900 Gossypium raimondii HOM05D005911 ORTHO05D007565 1.8e-14 84.7 73 61.6
QL04p035577 Quercus lobata HOM05D005911 ORTHO05D007565 5.4e-11 73.2 61 57.4
QL04p046160 Quercus lobata HOM05D005911 ORTHO05D338257 1.2e-10 72.0 61 55.7
QL11p051325 Quercus lobata HOM05D005911 ORTHO05D007565 2.1e-07 61.2 42 76.2


User provided reference genes

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