Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 5.8e-92 341.3 185 100.0
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 7.3e-87 324.3 186 94.6
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 5.8e-84 314.7 188 91.5
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 7.1e-82 307.8 186 91.9
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 2.7e-73 279.3 185 83.2
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 9.9e-68 260.8 191 75.4
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 3.2e-66 255.8 188 76.1
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.3e-64 250.4 192 72.9
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 3.8e-59 232.3 192 70.3
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 4.9e-59 231.9 186 70.4
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 1.1e-55 220.7 155 78.1
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 3.9e-48 195.7 171 63.7
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 6.3e-46 188.3 189 60.3
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 1.8e-45 186.8 188 58.5
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 3.4e-44 182.6 194 58.2
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 1.3e-43 180.6 203 55.7
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 1.3e-43 180.6 198 54.5
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 2.9e-43 179.5 199 55.3
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.1e-42 177.6 199 54.8
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 1.4e-42 177.2 192 57.8
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.4e-42 177.2 199 55.8
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 1.9e-42 176.8 169 59.2
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 3.2e-42 176.0 192 57.3
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.2e-42 176.0 199 55.3
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.2e-41 174.1 180 58.3
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.7e-41 172.9 199 54.8
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 2.7e-41 172.9 180 56.7
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 3.6e-41 172.6 188 55.3
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 2.3e-40 169.9 185 54.1
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 6.7e-40 168.3 180 55.6
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 6.7e-40 168.3 176 60.2
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 2.0e-39 166.8 190 52.1
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 9.7e-39 164.5 192 52.6
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 6.3e-38 161.8 186 53.8
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 6.3e-38 161.8 197 51.3
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 1.1e-37 161.0 184 52.2
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 6.9e-37 158.3 186 51.1
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 9.1e-37 157.9 187 52.9
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 2.0e-36 156.8 174 54.0
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 1.7e-35 153.7 181 51.9
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 2.9e-35 152.9 171 52.6
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 3.8e-35 152.5 186 51.6
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 6.5e-35 151.8 171 50.9
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 6.5e-35 151.8 177 52.5
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 6.5e-35 151.8 187 50.3
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 8.5e-35 151.4 181 51.9
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 1.1e-34 151.0 186 47.3
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.1e-34 151.0 181 50.3
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 1.4e-34 150.6 194 52.1
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.9e-34 150.2 189 50.8
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.2e-33 147.5 168 53.0
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 1.8e-32 143.7 187 48.1
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 1.1e-31 141.0 181 47.5
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 2.0e-31 140.2 165 49.1
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 5.7e-31 138.7 171 49.7
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 5.7e-31 138.7 175 47.4
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 9.7e-31 137.9 176 46.0
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 2.2e-30 136.7 188 46.3
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 2.2e-30 136.7 187 48.7
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 3.7e-30 136.0 179 45.8
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 3.7e-30 136.0 187 45.5
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 3.7e-30 136.0 167 50.3
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 8.2e-30 134.8 179 49.2
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 8.2e-30 134.8 180 45.0
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 1.4e-29 134.0 190 45.3
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 2.6e-28 129.8 179 45.3
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 4.5e-28 129.0 179 45.3
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 7.7e-28 128.3 173 45.1
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 1.7e-27 127.1 73 86.3
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 3.8e-27 125.9 189 43.9
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 7.2e-26 121.7 190 41.6
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.2e-25 120.9 175 47.4
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 1.2e-25 120.9 226 40.7
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 1.6e-25 120.6 189 42.3
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 2.7e-25 119.8 140 52.1
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.7e-25 119.8 172 45.3
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 8.0e-25 118.2 205 40.0
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 1.0e-24 117.9 169 44.4
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 1.4e-24 117.5 173 42.2
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 2.3e-24 116.7 187 46.5
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 3.0e-24 116.3 205 39.0
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 2.0e-23 113.6 136 50.0
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 7.5e-23 111.7 173 45.7
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 9.7e-23 111.3 65 83.1
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 1.3e-22 110.9 180 43.9
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 1.8e-21 107.1 138 51.4
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 2.4e-21 106.7 185 41.1
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 1.6e-20 104.0 100 58.0
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 3.5e-20 102.8 185 37.3
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 5.9e-20 102.1 153 42.5
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 7.7e-20 101.7 186 39.2
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.3e-19 100.9 145 48.3
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.2e-19 100.1 188 40.4
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 4.2e-18 95.9 142 45.8
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 2.1e-17 93.6 184 37.0
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 8.0e-17 91.7 186 39.2
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.4e-16 90.9 75 62.7
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 1.8e-16 90.5 186 38.7
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.8e-16 90.5 150 38.0
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 2.3e-16 90.1 149 41.6
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 4.0e-16 89.4 146 39.7
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 8.8e-16 88.2 188 38.3
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 1.5e-15 87.4 187 37.4
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 1.5e-15 87.4 187 37.4
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 2.6e-15 86.7 149 42.3
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 3.4e-15 86.3 185 38.4
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 7.5e-15 85.1 186 38.2
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 7.5e-15 85.1 185 38.4
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 9.8e-15 84.7 187 37.4
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 9.8e-15 84.7 187 36.9
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.2e-14 83.6 121 44.6
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 3.7e-14 82.8 181 35.9
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 4.8e-14 82.4 187 38.0
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 6.3e-14 82.0 145 40.0
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 1.4e-13 80.9 202 38.1
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 9.1e-13 78.2 202 37.1
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 2.7e-12 76.6 181 30.4
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.1e-10 71.2 156 39.1
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 1.1e-10 71.2 194 35.6
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 1.5e-10 70.9 92 42.4
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 1.9e-10 70.5 195 36.9
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 1.9e-10 70.5 195 36.9
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 1.9e-10 70.5 195 36.9
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 1.9e-10 70.5 195 36.9
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 4.2e-10 69.3 196 36.2
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 8.0e-09 65.1 90 47.8
Nitab4.5_0000867g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 8.0e-09 65.1 123 36.6
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 3.0e-08 63.2 90 46.7
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 6.8e-08 62.0 90 44.4
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 2.2e-06 57.0 192 33.3
ATR0088G022 Amborella trichopoda HOM05D005697 ORTHO05D006951 3.7e-06 56.2 143 30.8


User provided reference genes

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