Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G231900 Phaseolus vulgaris HOM05D006603 ORTHO05D007786 1.2e-72 276.6 149 100.0
Glyma.20G082000 Glycine max HOM05D006603 ORTHO05D007786 1.3e-63 246.5 146 91.8
Ca_25848_v3 Cicer arietinum L. HOM05D006603 ORTHO05D007786 1.5e-59 233.0 146 84.2
Lj6g0018890 Lotus japonicus HOM05D006603 ORTHO05D007786 2.5e-59 232.3 146 84.9
Psat6g018400 Pisum sativum HOM05D006603 ORTHO05D007786 2.3e-57 225.7 146 83.6
TPR.G23967 Trifolium pratense HOM05D006603 ORTHO05D007786 5.2e-57 224.6 146 82.2
Lalb_Chr03g0036931 Lupinus albus HOM05D006603 ORTHO05D007786 2.6e-56 222.2 146 82.2
Medtr1g045660 Medicago truncatula HOM05D006603 ORTHO05D007786 4.4e-56 221.5 147 81.6
VMungo0720G0308 Vigna mungo HOM05D006603 ORTHO05D007786 3.9e-52 208.4 123 89.4
arahy.Tifrunner.gnm1.ann1.T2GGRX Arachis hypogaea HOM05D006603 ORTHO05D007786 5.0e-52 208.0 172 70.3
arahy.Tifrunner.gnm1.ann1.GIKJ41 Arachis hypogaea HOM05D006603 ORTHO05D007786 1.1e-51 206.8 172 69.8
CiPaw.01G176600 Carya illinoinensis HOM05D006603 ORTHO05D007786 2.4e-46 189.1 150 71.3
Manes.03G157300 Manihot esculenta HOM05D006603 ORTHO05D007786 4.6e-45 184.9 145 71.7
TAR633G2131 Trochodendron aralioides HOM05D006603 ORTHO05D007786 7.3e-43 177.6 145 69.0
Ciclev10006126m.g Citrus clementina HOM05D006603 ORTHO05D007786 2.8e-42 175.6 149 66.4
Dinv29792 Davidia involucrata HOM05D006603 ORTHO05D007786 3.6e-42 175.3 148 68.9
Thecc.04G267600 Theobroma cacao HOM05D006603 ORTHO05D007786 8.1e-42 174.1 150 68.0
TWI09G1292 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 1.8e-41 172.9 146 69.9
MELO3C023048.2 Cucumis melo HOM05D006603 ORTHO05D007786 3.1e-41 172.2 144 65.3
TWI73G0993 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 3.1e-41 172.2 146 67.1
CsaV3_2G012360 Cucumis sativus L. HOM05D006603 ORTHO05D007786 8.9e-41 170.6 144 66.0
FvH4_4g05040 Fragaria vesca HOM05D006603 ORTHO05D007786 2.0e-40 169.5 150 66.0
FAN12G4195 Fragaria x ananassa HOM05D006603 ORTHO05D007786 2.0e-40 169.5 150 66.0
Duzib212G0187 Durio zibethinus HOM05D006603 ORTHO05D007786 2.6e-40 169.1 150 64.7
Gohir.D09G231900 Gossypium hirsutum HOM05D006603 ORTHO05D007786 3.4e-40 168.7 144 66.0
CANSAT78G1588 Cannabis sativa HOM05D006603 ORTHO05D007786 7.5e-40 167.5 148 64.9
RcHm_v2.0_Chr4g0395941 Rosa chinensis HOM05D006603 ORTHO05D007786 7.5e-40 167.5 150 67.3
GSVIVG01027941001 Vitis vinifera HOM05D006603 ORTHO05D007786 7.5e-40 167.5 143 68.5
MD13G1223900 Malus domestica HOM05D006603 ORTHO05D007786 1.3e-39 166.8 144 63.9
Gohir.A09G230800 Gossypium hirsutum HOM05D006603 ORTHO05D007786 1.7e-39 166.4 142 66.2
MD16G1228700 Malus domestica HOM05D006603 ORTHO05D007786 1.7e-39 166.4 144 63.9
THA.LOC104816009 Tarenaya hassleriana HOM05D006603 ORTHO05D007786 1.7e-39 166.4 137 70.1
Manes.15G046500 Manihot esculenta HOM05D006603 ORTHO05D007786 2.2e-39 166.0 140 68.6
PGR004G2303 Punica granatum HOM05D006603 ORTHO05D007786 2.2e-39 166.0 146 62.3
Duzib151G0118 Durio zibethinus HOM05D006603 ORTHO05D007786 4.9e-39 164.9 139 69.1
Potri.008G173000 Populus trichocarpa HOM05D006603 ORTHO05D007786 8.3e-39 164.1 144 65.3
Hma1.2p1_0112F.1_g054890 Hydrangea macrophylla HOM05D006603 ORTHO05D007786 1.4e-38 163.3 147 62.6
CSS0001604 Camellia sinensis var. sinensis HOM05D006603 ORTHO05D007786 1.9e-38 162.9 148 62.2
FAN22G1779 Fragaria x ananassa HOM05D006603 ORTHO05D007786 1.9e-38 162.9 150 64.0
MBI10_g39247_MAGBIO Magnolia biondii HOM05D006603 ORTHO05D007786 2.4e-38 162.5 149 61.7
Actinidia39936 Actinidia chinensis HOM05D006603 ORTHO05D007786 7.1e-38 161.0 144 61.1
Potri.010G064500 Populus trichocarpa HOM05D006603 ORTHO05D007786 7.1e-38 161.0 151 65.6
Sc25g0004840 Simmondsia chinensis HOM05D006603 ORTHO05D007786 2.1e-37 159.5 147 63.3
Eucgr.H02902 Eucalyptus grandis HOM05D006603 ORTHO05D007786 4.6e-37 158.3 147 62.6
EL10Ac3g06681 Beta vulgaris HOM05D006603 ORTHO05D007786 1.3e-36 156.8 146 57.5
Actinidia11378 Actinidia chinensis HOM05D006603 ORTHO05D007786 3.9e-36 155.2 144 59.7
Aqoxy2G03755 Aquilegia oxysepala HOM05D006603 ORTHO05D007786 1.1e-35 153.7 146 61.6
BcaNung06560 Brassica carinata HOM05D006603 ORTHO05D007786 1.1e-35 153.7 143 61.5
Cc03_g06500 Coffea canephora HOM05D006603 ORTHO05D007786 1.1e-35 153.7 145 62.8
Carub.0001s0377 Capsella rubella HOM05D006603 ORTHO05D007786 5.6e-35 151.4 142 62.0
Nitab4.5_0005154g0030 Nicotiana tabacum HOM05D006603 ORTHO05D007786 1.2e-34 150.2 143 60.8
AL1G14230 Arabidopsis lyrata HOM05D006603 ORTHO05D007786 2.1e-34 149.4 143 62.9
Hund22279 Selenicereus undatus HOM05D006603 ORTHO05D007786 2.1e-34 149.4 146 57.5
AT1G04555 Arabidopsis thaliana HOM05D006603 ORTHO05D007786 2.8e-34 149.1 143 61.5
BolC5t29054H Brassica oleracea HOM05D006603 ORTHO05D007786 4.7e-34 148.3 142 62.0
Lsat_1_v5_gn_1_75441 Lactuca sativa HOM05D006603 ORTHO05D007786 4.7e-34 148.3 147 61.2
BraA10t42567Z Brassica rapa HOM05D006603 ORTHO05D007786 6.2e-34 147.9 142 61.3
Thhalv10009014m.g Eutrema salsugineum HOM05D006603 ORTHO05D007786 6.2e-34 147.9 142 63.4
Cfa014798 Carpinus fangiana HOM05D006603 ORTHO05D007786 1.8e-33 146.4 96 86.5
Haze_11482 Corylus avellana HOM05D006603 ORTHO05D007786 1.8e-33 146.4 140 66.4
vmacro15486 Vaccinium macrocarpon HOM05D006603 ORTHO05D007786 2.4e-33 146.0 170 53.5
CAN.G812.23 Capsicum annuum HOM05D006603 ORTHO05D007786 3.1e-33 145.6 143 57.3
Sp1g03390 Schrenkiella parvula HOM05D006603 ORTHO05D007786 3.1e-33 145.6 148 59.5
QL06p021600 Quercus lobata HOM05D006603 ORTHO05D007786 8.9e-33 144.1 95 80.0
Peaxi162Scf00531g00210 Petunia axillaris HOM05D006603 ORTHO05D007786 3.4e-32 142.1 145 58.6
PSO210G0805 Papaver somniferum HOM05D006603 ORTHO05D007786 7.6e-32 141.0 145 57.2
Oeu059390.1 Olea europaea HOM05D006603 ORTHO05D007786 2.9e-31 139.0 148 54.1
Sopen09g033770 Solanum pennellii HOM05D006603 ORTHO05D007786 2.9e-31 139.0 145 54.5
CARHR003900 Cardamine hirsuta HOM05D006603 ORTHO05D007786 3.8e-31 138.7 133 59.4
CDE04G0122 Ceratophyllum demersum HOM05D006603 ORTHO05D007786 6.4e-31 137.9 144 60.4
ECA248G1661 Erigeron canadensis HOM05D006603 ORTHO05D007786 1.1e-30 137.1 146 56.2
ATR0787G168 Amborella trichopoda HOM05D006603 ORTHO05D007786 1.9e-30 136.3 140 57.1
Sabra08G0132100 Salix brachista HOM05D006603 ORTHO05D007786 1.9e-30 136.3 96 80.2
HanXRQChr01g0023081 Helianthus annuus HOM05D006603 ORTHO05D007786 2.4e-30 136.0 146 54.1
Prupe.1G050700 Prunus persica HOM05D006603 ORTHO05D007786 3.2e-30 135.6 93 76.3
PGSC0003DMG400001502 Solanum tuberosum HOM05D006603 ORTHO05D007786 3.2e-30 135.6 145 53.8
PSO210G7184 Papaver somniferum HOM05D006603 ORTHO05D007786 4.1e-30 135.2 146 56.8
ClCG06G007300 Citrullus lanatus HOM05D006603 ORTHO05D007786 7.1e-30 134.4 151 56.3
MSTRG.9849 Avicennia marina HOM05D006603 ORTHO05D007786 3.5e-29 132.1 149 53.7
Sed0025873 Sechium edule HOM05D006603 ORTHO05D007786 4.6e-29 131.7 123 58.5
Aa31LG1G20320 Aethionema arabicum HOM05D006603 ORTHO05D007786 6.0e-29 131.3 141 56.0
FAN17G1046 Fragaria x ananassa HOM05D006603 ORTHO05D007786 6.0e-29 131.3 99 73.7
arahy.Tifrunner.gnm1.ann1.M12JR8 Arachis hypogaea HOM05D006603 ORTHO05D007786 6.6e-28 127.9 142 59.9
SGA_v2.0_scaffold147G36268 Striga asiatica HOM05D006603 ORTHO05D007786 1.5e-27 126.7 136 57.4
arahy.Tifrunner.gnm1.ann1.YUK4FD Arachis hypogaea HOM05D006603 ORTHO05D007786 2.5e-27 125.9 141 56.7
COL.COLO4_15990 Corchorus olitorius HOM05D006603 ORTHO05D007786 2.5e-27 125.9 121 58.7
Os02g0816700 Oryza sativa ssp. japonica HOM05D006603 ORTHO05D007786 7.3e-27 124.4 139 54.7
Gorai.006G254700 Gossypium raimondii HOM05D006603 ORTHO05D007786 9.6e-27 124.0 121 59.5
Cfa014800 Carpinus fangiana HOM05D006603 ORTHO05D007786 1.6e-26 123.2 77 85.7
Migut.G00559 Erythranthe guttata HOM05D006603 ORTHO05D007786 2.8e-26 122.5 149 50.3
A08p36880 Brassica napus HOM05D006603 ORTHO05D007786 3.6e-26 122.1 143 54.5
BolC8t46928H Brassica oleracea HOM05D006603 ORTHO05D007786 3.6e-26 122.1 143 55.2
BolC8t46924H Brassica oleracea HOM05D006603 ORTHO05D007786 4.7e-26 121.7 143 55.2
BolC8t46925H Brassica oleracea HOM05D006603 ORTHO05D007786 4.7e-26 121.7 143 55.2
BcaC07g36903 Brassica carinata HOM05D006603 ORTHO05D007786 8.1e-26 120.9 138 56.5
BolC8t46922H Brassica oleracea HOM05D006603 ORTHO05D007786 1.4e-25 120.2 144 55.6
Rhsim02G0047700 Rhododendron simsii HOM05D006603 ORTHO05D007786 4.0e-25 118.6 119 53.8
Zm00001eb191430 Zea mays HOM05D006603 ORTHO05D007786 4.0e-25 118.6 95 70.5
arahy.Tifrunner.gnm1.ann1.QP5CHE Arachis hypogaea HOM05D006603 ORTHO05D007786 6.9e-25 117.9 131 58.8
AUR62018035 Chenopodium quinoa HOM05D006603 ORTHO05D007786 9.0e-25 117.5 123 56.9
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 9.0e-25 117.5 91 71.4
BolC8t52747H Brassica oleracea HOM05D000117 ORTHO05D007786 2.0e-24 116.3 136 55.9
AUR62015239 Chenopodium quinoa HOM05D006603 ORTHO05D007786 2.6e-24 115.9 122 55.7
Solyc09g090820.4 Solanum lycopersicum HOM05D006603 ORTHO05D007786 7.6e-24 114.4 89 68.5
Ah.04g153810 Amaranthus hybridus HOM05D006603 ORTHO05D007786 1.3e-23 113.6 121 55.4
Dinv27124 Davidia involucrata HOM05D006603 ORTHO05D007786 2.4e-22 109.4 83 75.9
C05p02730 Brassica napus HOM05D001210 ORTHO05D001036 3.2e-22 109.0 117 57.3
HPP92_020757 Vanilla planifolia HOM05D006603 ORTHO05D007786 4.2e-22 108.6 150 46.7
BcaB03g13488 Brassica carinata HOM05D006603 ORTHO05D007786 4.6e-21 105.1 127 51.2
C08p01190 Brassica napus HOM05D003335 ORTHO05D003853 6.0e-21 104.8 94 67.0
BraA08t35589Z Brassica rapa HOM05D003335 ORTHO05D003853 7.8e-21 104.4 94 67.0
BraA09t42112Z Brassica rapa HOM05D000117 ORTHO05D007786 1.0e-20 104.0 94 70.2
arahy.Tifrunner.gnm1.ann1.N50CGY Arachis hypogaea HOM05D006603 ORTHO05D007786 2.3e-20 102.8 90 68.9
Cpa.g.sc59.20 Carica papaya HOM05D006603 ORTHO05D007786 3.9e-20 102.1 71 73.2
arahy.Tifrunner.gnm1.ann1.49WF5R Arachis hypogaea HOM05D006603 ORTHO05D007786 1.5e-19 100.1 86 70.9
Nitab4.5_0001041g0010 Nicotiana tabacum HOM05D006603 ORTHO05D007786 1.3e-18 97.1 122 50.8
unitig_32.g11693 Utricularia gibba HOM05D006603 ORTHO05D007786 1.1e-17 94.0 169 39.6
SalBow2G0496 Salvia bowleyana HOM05D006603 ORTHO05D007786 2.0e-16 89.7 129 45.7
Sabra10G0042500 Salix brachista HOM05D006603 ORTHO05D007786 5.8e-16 88.2 88 59.1
GSVIVG01027940001 Vitis vinifera HOM05D006603 ORTHO05D015671 1.3e-12 77.0 93 54.8
C08p52130 Brassica napus HOM05D000117 ORTHO05D001036 7.4e-11 71.2 62 66.1
SMO144G0051 Selaginella moellendorffii HOM05D002103 ORTHO05D007786 1.3e-10 70.5 138 34.1
A09p67800 Brassica napus HOM05D000117 ORTHO05D001036 4.8e-10 68.6 69 66.7
AagrBONN_evm.TU.Sc2ySwM_228.3673 Anthoceros agrestis HOM05D002103 ORTHO05D004020 1.1e-09 67.4 142 35.2
SMO271G0137 Selaginella moellendorffii HOM05D002103 ORTHO05D004020 1.1e-09 67.4 146 33.6
Hma1.2p1_0982F.1_g243900 Hydrangea macrophylla HOM05D002103 ORTHO05D004020 3.1e-09 65.9 138 34.1
Nn1g02998 Nelumbo nucifera HOM05D006603 ORTHO05D007786 5.3e-09 65.1 79 48.1
SMO308G0045 Selaginella moellendorffii HOM05D002103 ORTHO05D004020 9.0e-09 64.3 138 34.1
Mapoly0020s0146 Marchantia polymorpha HOM05D002103 ORTHO05D007786 4.5e-08 62.0 144 32.6
Peaxi162Scf00528g00417 Petunia axillaris HOM05D002103 ORTHO05D004020 9.9e-08 60.8 148 32.4
A10p02970 Brassica napus HOM05D000117 ORTHO05D001036 1.3e-07 60.5 46 73.9
Pp3c12_23290 Physcomitrium patens HOM05D002103 ORTHO05D004020 1.7e-07 60.1 141 29.8
Atru.chr13.650 Acer truncatum HOM05D002103 ORTHO05D004020 6.4e-07 58.2 140 28.6
Cfa018527 Carpinus fangiana HOM05D002103 ORTHO05D004020 6.4e-07 58.2 143 30.1
Actinidia23265 Actinidia chinensis HOM05D002103 ORTHO05D004020 8.4e-07 57.8 136 31.6
Cc10_g04320 Coffea canephora HOM05D002103 ORTHO05D004020 8.4e-07 57.8 133 33.8
Nn5g30229 Nelumbo nucifera HOM05D002103 ORTHO05D004020 8.4e-07 57.8 133 32.3
GSVIVG01009523001 Vitis vinifera HOM05D002103 ORTHO05D004020 1.1e-06 57.4 130 30.0
CiPaw.16G045800 Carya illinoinensis HOM05D002103 ORTHO05D004020 1.9e-06 56.6 141 31.2
Gohir.D06G015300 Gossypium hirsutum HOM05D002103 ORTHO05D004020 3.2e-06 55.8 138 28.3
TAR381G0883 Trochodendron aralioides HOM05D002103 ORTHO05D004020 3.2e-06 55.8 139 27.3
CSS0022390 Camellia sinensis var. sinensis HOM05D002103 ORTHO05D004020 4.2e-06 55.5 138 31.9
MD15G1084700 Malus domestica HOM05D002103 ORTHO05D004020 4.2e-06 55.5 143 29.4
SGA_v2.0_scaffold14G07034 Striga asiatica HOM05D002103 ORTHO05D004020 5.5e-06 55.1 132 28.0
CANSAT01G2416 Cannabis sativa HOM05D002103 ORTHO05D004020 7.1e-06 54.7 145 28.3
Gohir.A06G017200 Gossypium hirsutum HOM05D002103 ORTHO05D004020 7.1e-06 54.7 138 27.5
QL06p021608 Quercus lobata HOM05D006603 ORTHO05D007786 7.1e-06 54.7 46 58.7
Manes.18G032500 Manihot esculenta HOM05D002103 ORTHO05D004020 9.3e-06 54.3 131 27.5
Pp3c19_17840 Physcomitrium patens HOM05D002103 ORTHO05D004020 9.3e-06 54.3 145 29.7


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