Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 2.7e-183 645.2 321 100.0
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 6.8e-171 604.0 321 93.5
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 2.3e-155 552.4 321 86.0
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 2.1e-140 502.7 314 76.1
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 9.0e-139 497.3 314 75.8
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 2.0e-138 496.1 314 77.4
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 2.7e-135 485.7 310 76.8
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 1.3e-134 483.4 319 72.7
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 1.1e-133 480.3 313 73.5
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 1.9e-128 463.0 310 72.6
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 5.4e-128 461.5 321 73.8
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 3.9e-118 428.7 310 64.2
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 4.0e-115 418.7 309 65.0
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 3.4e-114 415.6 314 66.6
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 4.5e-114 415.2 314 62.4
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 1.1e-112 410.6 304 65.1
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 1.1e-112 410.6 308 63.3
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 1.9e-112 409.8 303 62.4
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 2.5e-112 409.5 309 63.1
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 2.7e-111 406.0 312 62.2
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 2.7e-111 406.0 309 62.5
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 6.0e-111 404.8 330 60.9
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 7.9e-111 404.4 308 62.3
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 2.3e-110 402.9 309 61.5
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 6.7e-110 401.4 308 61.0
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 1.9e-109 399.8 308 63.6
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 2.5e-109 399.4 311 64.0
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 4.3e-109 398.7 309 64.4
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 7.4e-109 397.9 305 62.0
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 7.4e-109 397.9 308 61.7
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 9.7e-109 397.5 310 62.9
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 4.8e-108 395.2 305 62.3
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 4.8e-108 395.2 310 60.0
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 1.1e-107 394.0 308 60.7
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 1.1e-107 394.0 305 60.3
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 2.4e-107 392.9 310 59.7
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 9.0e-107 391.0 310 59.7
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 1.0e-105 387.5 309 60.5
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 6.5e-105 384.8 311 60.1
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 8.5e-105 384.4 307 60.6
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 1.1e-104 384.0 307 60.9
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 1.1e-104 384.0 307 60.6
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 1.9e-104 383.3 306 60.8
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 5.5e-104 381.7 310 60.0
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 1.2e-103 380.6 307 59.0
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 2.3e-102 376.3 308 60.7
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 5.1e-102 375.2 321 55.8
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 6.7e-102 374.8 308 59.7
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 1.5e-101 373.6 306 58.2
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 4.3e-101 372.1 307 57.3
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 9.7e-101 370.9 309 58.9
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 2.8e-100 369.4 309 55.3
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 8.2e-100 367.9 312 58.3
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 1.4e-99 367.1 308 56.5
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 5.3e-99 365.2 309 58.3
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 2.0e-98 363.2 305 57.7
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 2.0e-98 363.2 293 57.7
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 2.6e-98 362.8 308 58.1
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 7.7e-98 361.3 315 57.5
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 1.3e-97 360.5 306 58.2
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 1.3e-97 360.5 308 58.4
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 1.7e-97 360.1 293 59.0
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 2.9e-97 359.4 308 58.1
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 7.2e-96 354.8 306 57.8
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 7.2e-96 354.8 306 57.8
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 9.4e-96 354.4 297 58.2
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 2.7e-95 352.8 317 56.8
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 2.7e-95 352.8 283 62.5
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 4.7e-95 352.1 305 56.4
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 1.4e-94 350.5 306 57.5
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 2.3e-94 349.7 306 57.2
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 3.9e-94 349.0 307 57.7
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 6.7e-94 348.2 241 73.0
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 6.7e-94 348.2 307 56.4
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 8.8e-94 347.8 305 54.4
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 7.4e-93 344.7 266 63.2
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 7.4e-93 344.7 304 54.9
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 1.4e-91 340.5 312 53.5
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 1.7e-89 333.6 307 55.4
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 8.5e-89 331.3 238 66.8
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 2.5e-88 329.7 310 55.2
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 6.7e-86 321.6 310 53.2
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 1.1e-85 320.9 271 62.7
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 1.5e-85 320.5 269 59.5
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 3.1e-83 312.8 272 59.2
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 7.0e-83 311.6 308 52.3
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 7.0e-83 311.6 320 52.5
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 5.5e-80 302.0 269 57.2
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 9.4e-80 301.2 221 64.3
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 4.0e-78 295.8 244 61.1
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 5.2e-78 295.4 259 55.6
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 3.7e-76 289.3 284 54.2
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 1.8e-75 287.0 222 60.8
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 2.4e-75 286.6 250 54.8
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 5.2e-70 268.9 265 53.6
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 3.7e-68 262.7 209 57.9
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 7.0e-67 258.5 309 45.0
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 1.5e-64 250.8 309 43.4
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 1.5e-61 240.7 222 53.6
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 5.9e-58 228.8 304 41.1
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 1.7e-57 227.3 179 60.3
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 2.3e-57 226.9 322 38.8
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 6.6e-57 225.3 301 44.9
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 9.5e-56 221.5 175 57.7
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 5.8e-53 212.2 300 39.3
CARHR130580 Cardamine hirsuta HOM05D005679 ORTHO05D007228 2.3e-49 200.3 191 54.5
Sed0012745 Sechium edule HOM05D005679 ORTHO05D007228 2.3e-49 200.3 210 48.6
SEGI_36814 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 3.3e-48 196.4 223 46.6
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis HOM05D005679 ORTHO05D007228 1.5e-45 187.6 190 48.4
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 2.9e-44 183.3 153 58.8
Lj2A135T55 Lonicera japonica HOM05D005679 ORTHO05D007228 1.3e-41 174.5 162 57.4
HanXRQChr10g0313891 Helianthus annuus HOM05D005679 ORTHO05D007228 2.0e-37 160.6 154 56.5
CBR_g961 Chara braunii HOM05D005679 ORTHO05D007228 2.6e-37 160.2 337 31.5
Dinv31674 Davidia involucrata HOM05D005679 ORTHO05D007228 6.4e-36 155.6 255 40.4
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 5.4e-35 152.5 110 61.8
SalBow3G2040 Salvia bowleyana HOM05D005679 ORTHO05D007228 1.5e-29 134.4 154 46.1
Lsat_1_v5_gn_1_48021 Lactuca sativa HOM05D005679 ORTHO05D007228 3.8e-28 129.8 90 62.2
Cre01.g042150 Chlamydomonas reinhardtii HOM05D005679 ORTHO05D007228 4.2e-27 126.3 183 39.3
Lj2A135G55 Lonicera japonica HOM05D005679 ORTHO05D007228 2.3e-25 120.6 73 65.8
AUR62028549 Chenopodium quinoa HOM05D005679 ORTHO05D007228 1.3e-23 114.8 176 39.2
AUR62033501 Chenopodium quinoa HOM05D005679 ORTHO05D007228 1.1e-22 111.7 189 38.1
MCO10G317 Micromonas commoda HOM05D005679 ORTHO05D007228 1.5e-21 107.8 145 41.4
Gorai.006G155900 Gossypium raimondii HOM05D005679 ORTHO05D007228 2.0e-21 107.5 74 66.2
Gohir.D09G135950 Gossypium hirsutum HOM05D005679 ORTHO05D007228 5.8e-21 105.9 74 64.9
DCAR_009157 Daucus carota HOM05D005679 ORTHO05D007228 8.4e-20 102.1 135 40.7
Actinidia14313 Actinidia chinensis HOM05D005679 ORTHO05D007228 1.4e-19 101.3 195 36.9
SEGI_00479 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 4.8e-15 86.3 76 46.1
PRCOL_00001551 Prasinoderma coloniale HOM05D005679 ORTHO05D007228 4.0e-14 83.2 163 35.0
HanXRQChr10g0313971 Helianthus annuus HOM05D005679 ORTHO05D007228 2.6e-13 80.5 106 44.3
arahy.Tifrunner.gnm1.ann1.7P1BGF Arachis hypogaea HOM05D005679 ORTHO05D003748 2.1e-10 70.9 60 60.0


User provided reference genes

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