Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 3.5e-65 251.5 133 100.0
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 2.3e-56 222.2 133 86.5
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 1.8e-53 212.6 128 86.7
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 2.5e-50 202.2 134 79.9
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 2.8e-46 188.7 133 72.2
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 5.3e-45 184.5 133 69.9
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 7.7e-44 180.6 133 69.9
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 3.8e-43 178.3 129 69.8
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 2.4e-37 159.1 129 61.2
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 1.0e-35 153.7 125 64.0
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 1.0e-35 153.7 125 64.0
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 1.0e-35 153.7 125 64.0
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 8.8e-32 140.6 128 54.7
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 4.4e-31 138.3 128 57.8
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 1.3e-30 136.7 128 56.2
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 1.3e-30 136.7 128 55.5
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.3e-30 136.7 127 56.7
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 2.2e-30 136.0 126 56.3
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 8.3e-30 134.0 125 56.0
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 2.4e-29 132.5 127 54.3
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 2.4e-29 132.5 126 55.6
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 2.4e-29 132.5 125 55.2
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 5.3e-29 131.3 124 52.4
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 7.0e-29 131.0 128 53.9
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 2.7e-28 129.0 129 51.2
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 3.5e-28 128.6 125 52.0
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 3.5e-28 128.6 140 50.7
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 3.5e-28 128.6 111 58.6
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 7.7e-28 127.5 129 53.5
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 7.7e-28 127.5 119 56.3
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.0e-27 127.1 125 51.2
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.0e-27 127.1 126 54.0
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 1.3e-27 126.7 127 54.3
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.3e-27 126.7 125 52.0
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 1.3e-27 126.7 142 50.7
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 2.2e-27 125.9 127 52.8
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 2.2e-27 125.9 127 52.8
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 2.9e-27 125.6 127 52.0
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 5.0e-27 124.8 127 52.0
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 5.0e-27 124.8 128 50.8
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 6.5e-27 124.4 126 53.2
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 6.5e-27 124.4 128 50.8
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 1.1e-26 123.6 127 51.2
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 1.5e-26 123.2 127 51.2
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 1.5e-26 123.2 125 52.8
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 1.5e-26 123.2 128 51.6
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 2.5e-26 122.5 134 50.7
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 3.2e-26 122.1 131 51.9
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 3.2e-26 122.1 122 51.6
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 4.2e-26 121.7 127 51.2
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 4.2e-26 121.7 128 49.2
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 5.5e-26 121.3 127 51.2
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 5.5e-26 121.3 145 47.6
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 9.4e-26 120.6 129 50.4
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 9.4e-26 120.6 132 48.5
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 9.4e-26 120.6 130 52.3
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 1.2e-25 120.2 128 50.8
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 1.2e-25 120.2 148 46.6
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 1.2e-25 120.2 126 50.8
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 1.6e-25 119.8 126 50.0
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 2.1e-25 119.4 127 49.6
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 2.7e-25 119.0 121 50.4
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 4.7e-25 118.2 125 48.8
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 8.0e-25 117.5 128 47.7
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 8.0e-25 117.5 129 48.1
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 1.0e-24 117.1 129 51.2
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 1.0e-24 117.1 127 48.0
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 1.0e-24 117.1 162 43.8
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 1.8e-24 116.3 128 47.7
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 3.0e-24 115.5 129 48.1
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 4.0e-24 115.2 123 51.2
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 4.0e-24 115.2 125 49.6
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 6.8e-24 114.4 128 48.4
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 6.8e-24 114.4 124 50.8
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 1.5e-23 113.2 122 50.8
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 2.0e-23 112.8 128 46.9
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 2.6e-23 112.5 121 47.9
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 3.4e-23 112.1 80 70.0
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 4.4e-23 111.7 129 48.1
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 5.7e-23 111.3 121 49.6
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 7.5e-23 110.9 103 55.3
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 7.5e-23 110.9 129 49.6
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 9.8e-23 110.5 125 49.6
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 1.3e-22 110.2 119 49.6
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 1.7e-22 109.8 128 46.9
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 2.2e-22 109.4 115 48.7
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 2.2e-22 109.4 125 49.6
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 2.8e-22 109.0 124 50.8
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 2.8e-22 109.0 125 48.8
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 3.7e-22 108.6 129 49.6
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 4.8e-22 108.2 121 48.8
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 8.3e-22 107.5 127 49.6
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 1.4e-21 106.7 126 46.0
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 1.4e-21 106.7 122 45.1
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 1.4e-21 106.7 122 45.1
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 1.8e-21 106.3 128 42.2
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 3.1e-21 105.5 124 46.0
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 1.2e-20 103.6 82 63.4
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 2.3e-19 99.4 167 39.5
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 2.5e-18 95.9 79 59.5
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 9.5e-18 94.0 121 43.0
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 1.2e-17 93.6 120 42.5
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 1.4e-16 90.1 81 51.9
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 1.8e-16 89.7 99 48.5
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 5.2e-16 88.2 77 53.2
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 1.5e-15 86.7 117 42.7
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 5.7e-15 84.7 117 41.0
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 3.2e-13 79.0 99 40.4
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 4.1e-13 78.6 117 39.3
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 7.8e-12 74.3 86 47.7
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 1.1e-10 70.5 103 34.0
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 5.6e-10 68.2 64 54.7
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 1.4e-08 63.5 98 39.8
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 1.4e-08 63.5 98 39.8
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 1.4e-08 63.5 92 41.3
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 1.8e-08 63.2 92 41.3
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 2.3e-08 62.8 92 41.3
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 1.5e-07 60.1 84 42.9
arahy.Tifrunner.gnm1.ann1.Q46SAL Arachis hypogaea HOM05D006467 ORTHO05D008012 9.8e-07 57.4 42 64.3


User provided reference genes

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