Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G216300 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 1.8e-111 406.0 209 100.0
Glyma.02G014400 Glycine max HOM05D007468 ORTHO05D009051 4.9e-61 238.4 221 67.4
Glyma.10G015100 Glycine max HOM05D007468 ORTHO05D009051 1.6e-59 233.4 210 65.7
VMungo0720G2271 Vigna mungo HOM05D007468 ORTHO05D009051 8.6e-58 227.6 220 63.2
Lalb_Chr21g0309461 Lupinus albus HOM05D007468 ORTHO05D009051 2.8e-48 196.1 222 55.0
Psat6g163440 Pisum sativum HOM05D007468 ORTHO05D009051 9.9e-38 161.0 199 53.3
Ca_10302_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 1.1e-36 157.5 172 56.4
Ca_09200_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 7.3e-33 144.8 198 49.0
Lalb_Chr15g0078361 Lupinus albus HOM05D007468 ORTHO05D009051 9.6e-33 144.4 246 43.1
Phvul.001G211600 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 2.1e-32 143.3 182 50.5
Glyma.19G214800 Glycine max HOM05D007468 ORTHO05D009051 1.4e-31 140.6 200 50.5
TPR.G19783 Trifolium pratense HOM05D007468 ORTHO05D009051 1.2e-30 137.5 253 42.7
Psat5g096000 Pisum sativum HOM05D007468 ORTHO05D009051 2.6e-30 136.3 184 47.8
Psat3g020640 Pisum sativum HOM05D007468 ORTHO05D009051 3.4e-30 136.0 178 48.3
Lj5g0007724 Lotus japonicus HOM05D007468 ORTHO05D009051 9.9e-30 134.4 211 46.4
TPR.G20290 Trifolium pratense HOM05D007468 ORTHO05D009051 2.9e-29 132.9 209 44.5
Glyma.03G218100 Glycine max HOM05D007468 ORTHO05D009051 4.2e-28 129.0 211 46.0
Medtr1g087720 Medicago truncatula HOM05D007468 ORTHO05D009051 1.8e-26 123.6 252 37.7
Medtr7g109300 Medicago truncatula HOM05D007468 ORTHO05D009051 2.5e-25 119.8 271 38.0
CANSAT25G0675 Cannabis sativa HOM05D007468 ORTHO05D009051 1.3e-24 117.5 190 41.6
Lj1g0017695 Lotus japonicus HOM05D007468 ORTHO05D009051 2.8e-24 116.3 171 46.2
Lalb_Chr08g0237891 Lupinus albus HOM05D007468 ORTHO05D009051 1.8e-23 113.6 238 39.1
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 3.9e-18 95.9 185 43.2
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 8.7e-18 94.7 195 37.9
ClCG09G005280 Citrullus lanatus HOM05D007468 ORTHO05D009051 1.9e-17 93.6 180 40.0
MELO3C015942.2 Cucumis melo HOM05D007468 ORTHO05D009051 1.9e-17 93.6 181 38.1
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 4.3e-17 92.4 177 39.0
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 5.7e-17 92.0 180 41.1
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 1.3e-16 90.9 180 41.1
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 2.8e-16 89.7 184 41.3
Sed0007650 Sechium edule HOM05D007468 ORTHO05D009051 2.8e-16 89.7 202 37.6
Cfa005843 Carpinus fangiana HOM05D007468 ORTHO05D009051 3.7e-16 89.4 189 37.6
PSO210G3413 Papaver somniferum HOM05D007468 ORTHO05D009051 3.7e-16 89.4 214 39.3
CsaV3_4G001100 Cucumis sativus L. HOM05D007468 ORTHO05D009051 4.8e-16 89.0 185 37.8
FAN04G2054 Fragaria x ananassa HOM05D007468 ORTHO05D009051 8.2e-16 88.2 175 40.6
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 8.2e-16 88.2 180 40.6
Aqoxy2G02809 Aquilegia oxysepala HOM05D007468 ORTHO05D009051 1.4e-15 87.4 185 38.4
MELO3C017927.2 Cucumis melo HOM05D007468 ORTHO05D009051 2.4e-15 86.7 221 36.2
TAR365G0390 Trochodendron aralioides HOM05D007468 ORTHO05D009051 3.1e-15 86.3 197 35.5
RcHm_v2.0_Chr7g0241941 Rosa chinensis HOM05D007468 ORTHO05D009051 4.0e-15 85.9 158 42.4
ClCG10G011220 Citrullus lanatus HOM05D007468 ORTHO05D009051 5.3e-15 85.5 151 40.4
Rhsim01G0289100 Rhododendron simsii HOM05D007468 ORTHO05D009051 5.3e-15 85.5 182 37.9
Sed0000824 Sechium edule HOM05D007468 ORTHO05D009051 5.3e-15 85.5 175 38.9
Haze_05007 Corylus avellana HOM05D007468 ORTHO05D009051 6.9e-15 85.1 182 39.0
Gohir.A07G127300 Gossypium hirsutum HOM05D007468 ORTHO05D009051 1.5e-14 84.0 191 36.6
TAR362G1257 Trochodendron aralioides HOM05D007468 ORTHO05D009051 2.6e-14 83.2 163 41.7
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 4.5e-14 82.4 181 37.6
VMungo1383G0307 Vigna mungo HOM05D007468 ORTHO05D009051 1.0e-13 81.3 171 39.2
Nn3g21627 Nelumbo nucifera HOM05D007468 ORTHO05D009051 1.3e-13 80.9 193 35.8
Gorai.001G142900 Gossypium raimondii HOM05D007468 ORTHO05D009051 1.7e-13 80.5 190 36.3
Haze_05006 Corylus avellana HOM05D007468 ORTHO05D009051 2.2e-13 80.1 182 36.3
Gohir.D07G131600 Gossypium hirsutum HOM05D007468 ORTHO05D009051 2.9e-13 79.7 189 36.5
Duzib133G0259 Durio zibethinus HOM05D007468 ORTHO05D009051 1.4e-12 77.4 173 38.2
Peaxi162Scf00001g00282 Petunia axillaris HOM05D007468 ORTHO05D009051 1.4e-12 77.4 175 37.1
Duzib138G0571 Durio zibethinus HOM05D007468 ORTHO05D009051 1.9e-12 77.0 173 37.6
PSO357G0021 Papaver somniferum HOM05D007468 ORTHO05D009051 3.2e-12 76.3 182 37.9
Manes.01G225500 Manihot esculenta HOM05D007468 ORTHO05D009051 5.5e-12 75.5 162 40.1
Cpa.g.sc18.3 Carica papaya HOM05D007468 ORTHO05D009051 7.1e-12 75.1 189 33.9
Oeu008452.1 Olea europaea HOM05D007468 ORTHO05D009051 7.1e-12 75.1 141 44.0
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 1.6e-11 73.9 141 44.7
Thecc.01G309900 Theobroma cacao HOM05D007468 ORTHO05D009051 2.7e-11 73.2 187 34.2
PSO170G3554 Papaver somniferum HOM05D007468 ORTHO05D009051 3.5e-11 72.8 168 39.3
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 3.5e-11 72.8 199 35.7
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 7.9e-11 71.6 199 35.7
CiPaw.08G091800 Carya illinoinensis HOM05D007468 ORTHO05D009051 1.0e-10 71.2 174 36.2
CAN.G668.23 Capsicum annuum HOM05D007468 ORTHO05D009051 1.3e-10 70.9 135 43.0
Nitab4.5_0004002g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 1.3e-10 70.9 176 35.2
Cc08_g11840 Coffea canephora HOM05D007468 ORTHO05D009051 3.0e-10 69.7 139 38.8
PGSC0003DMG400031830 Solanum tuberosum HOM05D007468 ORTHO05D009051 8.7e-10 68.2 199 32.7
Eucgr.H01069 Eucalyptus grandis HOM05D007468 ORTHO05D009051 1.1e-09 67.8 168 33.9
Prupe.8G269500 Prunus persica HOM05D007468 ORTHO05D009051 1.1e-09 67.8 172 35.5
Lj1C20T8 Lonicera japonica HOM05D007468 ORTHO05D009051 2.5e-09 66.6 170 34.7
Nitab4.5_0000116g0050 Nicotiana tabacum HOM05D007468 ORTHO05D009051 2.5e-09 66.6 175 33.1
PGR044G1291 Punica granatum HOM05D007468 ORTHO05D009051 2.5e-09 66.6 214 33.2
Sc05g0000570 Simmondsia chinensis HOM05D007468 ORTHO05D009051 2.5e-09 66.6 173 34.7
MBI18_g24947_MAGBIO Magnolia biondii HOM05D007468 ORTHO05D009051 3.3e-09 66.2 170 28.8
SHI19828 Sapria himalayana HOM05D007468 ORTHO05D009051 4.3e-09 65.9 164 34.8
DCAR_002873 Daucus carota HOM05D007468 ORTHO05D009051 9.7e-09 64.7 217 30.4
CDE08G0146 Ceratophyllum demersum HOM05D007468 ORTHO05D009051 1.3e-08 64.3 180 30.0
CiPaw.07G114800 Carya illinoinensis HOM05D007468 ORTHO05D009051 2.2e-08 63.5 185 32.4
Rhsim13G0006300 Rhododendron simsii HOM05D007468 ORTHO05D009051 1.4e-07 60.8 238 31.1
Sabra14G0091900 Salix brachista HOM05D007468 ORTHO05D009051 1.4e-07 60.8 167 32.9
BcaB03g15797 Brassica carinata HOM05D010095 ORTHO05D012148 1.8e-07 60.5 195 29.2
MBI19_g29995_MAGBIO Magnolia biondii HOM05D007468 ORTHO05D009051 1.8e-07 60.5 187 34.8
Ciclev10024491m.g Citrus clementina HOM05D007468 ORTHO05D009051 2.4e-07 60.1 180 33.9
C05p01370 Brassica napus HOM05D010095 ORTHO05D012148 4.1e-07 59.3 185 29.7
Actinidia27604 Actinidia chinensis HOM05D007468 ORTHO05D009051 5.3e-07 58.9 174 32.8
Nitab4.5_0008750g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 6.9e-07 58.5 223 25.1
A10p01390 Brassica napus HOM05D010095 ORTHO05D012148 2.0e-06 57.0 186 29.6
Peaxi162Scf00140g01310 Petunia axillaris HOM05D007468 ORTHO05D009051 2.0e-06 57.0 186 31.2
CAN.G1209.19 Capsicum annuum HOM05D007468 ORTHO05D009051 2.6e-06 56.6 172 28.5
BolC5t28919H Brassica oleracea HOM05D010095 ORTHO05D012148 3.4e-06 56.2 185 29.2
Potri.014G123500 Populus trichocarpa HOM05D007468 ORTHO05D009051 4.5e-06 55.8 166 31.3
Nitab4.5_0002828g0030 Nicotiana tabacum HOM05D007468 ORTHO05D009051 5.9e-06 55.5 215 25.6


User provided reference genes

Program Settings