Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G213550 Phaseolus vulgaris HOM05D008489 ORTHO05D010677 8.3e-123 443.7 226 100.0
Phvul.007G213600 Phaseolus vulgaris HOM05D008489 ORTHO05D010677 4.5e-121 438.0 226 99.1
Phvul.007G213500 Phaseolus vulgaris HOM05D008489 ORTHO05D010677 4.4e-100 368.2 197 95.4
VMungo0720G2810 Vigna mungo HOM05D008489 ORTHO05D010677 2.4e-77 292.7 199 78.4
Glyma.02G011500 Glycine max HOM05D008489 ORTHO05D010677 2.5e-55 219.5 216 54.2
Glyma.10G012100 Glycine max HOM05D008489 ORTHO05D010677 8.2e-46 188.0 219 47.5
Lj5g0007109 Lotus japonicus HOM05D008489 ORTHO05D010677 2.9e-43 179.5 213 47.9
Ca_10277_v3 Cicer arietinum L. HOM05D008489 ORTHO05D010677 1.4e-42 177.2 156 54.5
Medtr1g086890 Medicago truncatula HOM05D008489 ORTHO05D010677 1.4e-40 170.6 154 51.3
Medtr1g086880 Medicago truncatula HOM05D008489 ORTHO05D010677 1.1e-39 167.5 152 52.0
Psat0s2317g0200 Pisum sativum HOM05D008489 ORTHO05D010677 1.5e-39 167.2 187 47.6
VMungo1383G1128 Vigna mungo HOM05D008489 ORTHO05D010677 1.1e-37 161.0 198 42.9
Phvul.001G213900 Phaseolus vulgaris HOM05D008489 ORTHO05D010677 5.9e-36 155.2 202 42.6
Lalb_Chr18g0046661 Lupinus albus HOM05D008489 ORTHO05D010677 2.9e-35 152.9 158 47.5
Glyma.03G220400 Glycine max HOM05D008489 ORTHO05D010677 5.0e-35 152.1 173 44.5
arahy.Tifrunner.gnm1.ann1.4I2GBK Arachis hypogaea HOM05D008489 ORTHO05D010677 1.8e-32 143.7 221 39.8
arahy.Tifrunner.gnm1.ann1.E1ZLD6 Arachis hypogaea HOM05D008489 ORTHO05D010677 1.8e-32 143.7 221 39.8
Lalb_Chr15g0078121 Lupinus albus HOM05D008489 ORTHO05D010677 8.8e-32 141.4 181 44.2
arahy.Tifrunner.gnm1.ann1.27A6A2 Arachis hypogaea HOM05D008489 ORTHO05D010677 1.1e-29 134.4 128 50.0
arahy.Tifrunner.gnm1.ann1.68BGXQ Arachis hypogaea HOM05D008489 ORTHO05D010677 2.4e-29 133.3 128 49.2
Lalb_Chr15g0088681 Lupinus albus HOM05D008489 ORTHO05D010677 1.4e-24 117.5 184 38.0
TPR.G38587 Trifolium pratense HOM05D008489 ORTHO05D010677 1.5e-23 114.0 135 43.7
Lj6g0026871 Lotus japonicus HOM05D008489 ORTHO05D010677 9.7e-23 111.3 140 43.6
TPR.G7716 Trifolium pratense HOM05D008489 ORTHO05D010677 1.3e-22 110.9 122 49.2
Glyma.09G021800 Glycine max HOM05D008489 ORTHO05D010677 1.8e-21 107.1 185 35.1
arahy.Tifrunner.gnm1.ann1.4N213E Arachis hypogaea HOM05D008489 ORTHO05D010677 4.1e-21 105.9 113 45.1
TPR.G7980 Trifolium pratense HOM05D008489 ORTHO05D010677 7.0e-21 105.1 165 37.6
Ca_24688_v3 Cicer arietinum L. HOM05D008489 ORTHO05D010677 9.1e-21 104.8 140 41.4
arahy.Tifrunner.gnm1.ann1.ZRHL97 Arachis hypogaea HOM05D008489 ORTHO05D010677 1.6e-20 104.0 174 37.4
Glyma.09G021900 Glycine max HOM05D008489 ORTHO05D010677 1.6e-20 104.0 189 38.1
Lalb_Chr18g0057851 Lupinus albus HOM05D008489 ORTHO05D010677 1.6e-20 104.0 191 38.7
Glyma.15G128200 Glycine max HOM05D008489 ORTHO05D010677 4.5e-20 102.4 189 37.6
Glyma.15G128100 Glycine max HOM05D008489 ORTHO05D010677 5.9e-20 102.1 185 33.0
arahy.Tifrunner.gnm1.ann1.GTU453 Arachis hypogaea HOM05D008489 ORTHO05D010677 2.2e-19 100.1 175 37.1
Medtr2g029460 Medicago truncatula HOM05D008489 ORTHO05D010677 1.5e-18 97.4 192 34.9
Ca_00798_v3 Cicer arietinum L. HOM05D008489 ORTHO05D010677 3.2e-18 96.3 194 32.0
Lalb_Chr15g0088691 Lupinus albus HOM05D008489 ORTHO05D010677 7.2e-18 95.1 155 36.1
MD03G1299200 Malus domestica HOM05D005742 ORTHO05D001888 1.6e-17 94.0 181 30.9
TPR.G26534 Trifolium pratense HOM05D008489 ORTHO05D010677 3.6e-17 92.8 165 33.3
Psat1g169160 Pisum sativum HOM05D008489 ORTHO05D010677 4.7e-17 92.4 140 37.9
Lalb_Chr20g0119951 Lupinus albus HOM05D008489 ORTHO05D010677 1.4e-16 90.9 178 33.7
Psat1g169120 Pisum sativum HOM05D008489 ORTHO05D010677 4.0e-16 89.4 148 34.5
Lalb_Chr20g0119961 Lupinus albus HOM05D008489 ORTHO05D010677 5.2e-16 89.0 156 34.6
VMungo0540G2195 Vigna mungo HOM05D008489 ORTHO05D010677 5.2e-16 89.0 175 33.1
TPR.G26536 Trifolium pratense HOM05D008489 ORTHO05D010677 1.2e-15 87.8 143 35.7
TAR362G0759 Trochodendron aralioides HOM05D005742 ORTHO05D001888 1.5e-15 87.4 154 28.6
Phvul.006G130500 Phaseolus vulgaris HOM05D008489 ORTHO05D010677 3.4e-15 86.3 143 36.4
VMungo0540G1769 Vigna mungo HOM05D008489 ORTHO05D010677 3.7e-14 82.8 189 32.3
Potri.014G119200 Populus trichocarpa HOM05D008182 ORTHO05D001888 7.0e-13 78.6 126 31.7
TPR.G38686 Trifolium pratense HOM05D000274 ORTHO05D005226 3.5e-12 76.3 123 39.0
ATR0796G165 Amborella trichopoda HOM05D005742 ORTHO05D001888 5.9e-12 75.5 151 29.1
arahy.Tifrunner.gnm1.ann1.A8ALBL Arachis hypogaea HOM05D008489 ORTHO05D010677 2.9e-11 73.2 172 32.6
arahy.Tifrunner.gnm1.ann1.E26X3A Arachis hypogaea HOM05D008489 ORTHO05D010677 2.9e-11 73.2 174 32.2
Duzib138G0624 Durio zibethinus HOM05D008182 ORTHO05D001888 2.9e-11 73.2 144 29.2
Hma1.2p1_0013F.1_g008650 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 2.9e-11 73.2 147 30.6
Sabra02G0161800 Salix brachista HOM05D008182 ORTHO05D001888 2.9e-11 73.2 153 28.1
Gohir.D09G226600 Gossypium hirsutum HOM05D008182 ORTHO05D001888 5.0e-11 72.4 196 27.6
Sabra14G0088400 Salix brachista HOM05D008182 ORTHO05D001888 5.0e-11 72.4 127 29.1
Phvul.006G130600 Phaseolus vulgaris HOM05D008489 ORTHO05D010677 6.5e-11 72.0 149 30.2
arahy.Tifrunner.gnm1.ann1.MX0IDP Arachis hypogaea HOM05D008489 ORTHO05D010677 8.5e-11 71.6 172 31.4
Gohir.A11G109000 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.1e-10 71.2 146 28.1
Gohir.D11G113400 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.1e-10 71.2 146 28.1
Gorai.006G248300 Gossypium raimondii HOM05D008182 ORTHO05D001888 1.5e-10 70.9 196 27.0
Potri.002G194900 Populus trichocarpa HOM05D008182 ORTHO05D001888 1.5e-10 70.9 148 27.0
Gohir.A08G040400 Gossypium hirsutum HOM05D008182 ORTHO05D001888 2.5e-10 70.1 133 33.1
Prupe.1G118800 Prunus persica HOM05D005742 ORTHO05D001888 2.5e-10 70.1 143 28.7
MD16G1155100 Malus domestica HOM05D005742 ORTHO05D001888 5.5e-10 68.9 157 27.4
Gohir.D08G050500 Gossypium hirsutum HOM05D008182 ORTHO05D001888 7.2e-10 68.6 133 33.1
Potri.002G194800 Populus trichocarpa HOM05D008182 ORTHO05D001888 7.2e-10 68.6 148 26.4
QL06p011856 Quercus lobata HOM05D005742 ORTHO05D001888 7.2e-10 68.6 159 24.5
CANSAT78G0521 Cannabis sativa HOM05D005742 ORTHO05D001888 9.4e-10 68.2 168 26.2
Gohir.A11G108900 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.2e-09 67.8 191 25.1
Gorai.004G050100 Gossypium raimondii HOM05D008182 ORTHO05D001888 1.2e-09 67.8 133 33.1
Gorai.007G121900 Gossypium raimondii HOM05D008182 ORTHO05D001888 1.2e-09 67.8 147 27.2
Gorai.007G122100 Gossypium raimondii HOM05D008182 ORTHO05D001888 1.2e-09 67.8 146 27.4
Gohir.D11G113300 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.6e-09 67.4 147 27.2
Gohir.D11G113500 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.6e-09 67.4 146 27.4
Gohir.A09G224800 Gossypium hirsutum HOM05D008182 ORTHO05D001888 3.6e-09 66.2 191 25.7
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 4.7e-09 65.9 159 30.2
Dinv15186 Davidia involucrata HOM05D001340 ORTHO05D002318 6.1e-09 65.5 118 28.8
Rhsim02G0004500 Rhododendron simsii HOM05D005742 ORTHO05D001888 1.0e-08 64.7 155 28.4
MBI18_g17308_MAGBIO Magnolia biondii HOM05D005742 ORTHO05D001888 1.8e-08 63.9 141 23.4
ATR1152G035 Amborella trichopoda HOM05D008070 ORTHO05D001888 2.3e-08 63.5 180 26.7
Actinidia18454 Actinidia chinensis HOM05D005742 ORTHO05D001888 4.0e-08 62.8 141 26.2
Actinidia40376 Actinidia chinensis HOM05D005742 ORTHO05D001888 4.0e-08 62.8 141 26.2
MSTRG.24819 Avicennia marina HOM05D005742 ORTHO05D001888 4.0e-08 62.8 149 27.5
Glyma.15G141100 Glycine max HOM05D005742 ORTHO05D001888 4.0e-08 62.8 117 29.1
Gohir.A11G108700 Gossypium hirsutum HOM05D008182 ORTHO05D001888 4.0e-08 62.8 146 25.3
Cpa.g.sc9.68 Carica papaya HOM05D005742 ORTHO05D001888 5.2e-08 62.4 139 26.6
CARHR001860 Cardamine hirsuta HOM05D008182 ORTHO05D001888 8.8e-08 61.6 155 27.7
Ah.04g157100 Amaranthus hybridus HOM05D005742 ORTHO05D001888 1.5e-07 60.8 146 30.1
CDE07G0112 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 1.5e-07 60.8 183 27.3
Nitab4.5_0002218g0040 Nicotiana tabacum HOM05D005742 ORTHO05D001888 1.5e-07 60.8 148 27.0
unitig_0.g2583 Utricularia gibba HOM05D005742 ORTHO05D001888 1.5e-07 60.8 148 26.4
SalBow8G0437 Salvia bowleyana HOM05D005742 ORTHO05D001888 2.0e-07 60.5 149 26.2
SalBow8G4915 Salvia bowleyana HOM05D005742 ORTHO05D001888 2.0e-07 60.5 149 26.2
Rhsim04G0235100 Rhododendron simsii HOM05D005742 ORTHO05D001888 2.6e-07 60.1 143 31.5
CDE06G1547 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 7.5e-07 58.5 151 29.1
Gohir.A11G108866 Gossypium hirsutum HOM05D008182 ORTHO05D001888 7.5e-07 58.5 145 26.9
CDE06G2294 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 9.8e-07 58.2 183 26.8
Lj6P690T34 Lonicera japonica HOM05D005742 ORTHO05D001888 9.8e-07 58.2 147 28.6
Medtr2g029470 Medicago truncatula HOM05D008489 ORTHO05D010677 9.8e-07 58.2 194 27.3
VMungo0540G2083 Vigna mungo HOM05D005742 ORTHO05D001888 1.3e-06 57.8 117 26.5
MSTRG.21772 Avicennia marina HOM05D005742 ORTHO05D001888 1.7e-06 57.4 182 23.6
CANSAT25G2213 Cannabis sativa HOM05D005742 ORTHO05D001888 2.2e-06 57.0 172 26.2
TWI09G1381 Tripterygium wilfordii HOM05D005742 ORTHO05D001888 2.2e-06 57.0 155 26.5
Zm00001eb155570 Zea mays HOM05D024212 ORTHO05D025965 2.2e-06 57.0 202 25.2
Manes.05G004700 Manihot esculenta HOM05D008182 ORTHO05D001888 2.8e-06 56.6 123 26.8
Cc03_g00920 Coffea canephora HOM05D005742 ORTHO05D001888 3.7e-06 56.2 139 25.9
Glyma.09G036200 Glycine max HOM05D005742 ORTHO05D001888 3.7e-06 56.2 117 26.5
QL12p019526 Quercus lobata HOM05D005742 ORTHO05D001888 3.7e-06 56.2 151 23.2


User provided reference genes

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