Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G213050 Phaseolus vulgaris HOM05D005172 ORTHO05D006324 3.7e-221 771.2 365 100.0
VMungo0720G2990 Vigna mungo HOM05D005172 ORTHO05D006324 3.9e-215 751.1 363 96.7
Glyma.02G011100 Glycine max HOM05D005172 ORTHO05D006324 2.8e-205 718.4 363 92.3
Glyma.10G011700 Glycine max HOM05D005172 ORTHO05D006324 1.4e-204 716.1 363 91.7
Ca_10273_v3 Cicer arietinum L. HOM05D005172 ORTHO05D006324 1.3e-189 666.4 357 86.8
Medtr1g086810 Medicago truncatula HOM05D005172 ORTHO05D006324 3.1e-188 661.8 364 84.6
Lalb_Chr21g0309651 Lupinus albus HOM05D005172 ORTHO05D006324 6.5e-186 654.1 356 82.6
Lj5g0001265 Lotus japonicus HOM05D005172 ORTHO05D006324 1.0e-183 646.7 363 82.6
Psat6g162640 Pisum sativum HOM05D005172 ORTHO05D006324 2.6e-179 632.1 360 81.9
arahy.Tifrunner.gnm1.ann1.SY690W Arachis hypogaea HOM05D005172 ORTHO05D006324 2.0e-171 605.9 368 78.0
Gohir.A07G129100 Gossypium hirsutum HOM05D005172 ORTHO05D006324 9.8e-166 587.0 366 74.9
Duzib133G1494 Durio zibethinus HOM05D005172 ORTHO05D006324 8.3e-165 583.9 365 73.4
Gohir.D07G133500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 2.4e-164 582.4 363 74.9
Gorai.001G144800 Gossypium raimondii HOM05D005172 ORTHO05D006324 3.1e-164 582.0 363 74.9
CiPaw.07G118900 Carya illinoinensis HOM05D005172 ORTHO05D006324 1.0e-162 577.0 366 72.7
TWI36G0897 Tripterygium wilfordii HOM05D005172 ORTHO05D006324 1.1e-161 573.5 365 71.8
Atru.chr5.994 Acer truncatum HOM05D005172 ORTHO05D006324 4.2e-161 571.6 364 72.3
Eucgr.K03551 Eucalyptus grandis HOM05D005172 ORTHO05D006324 1.2e-160 570.1 361 71.5
RcHm_v2.0_Chr6g0249301 Rosa chinensis HOM05D005172 ORTHO05D006324 2.8e-160 568.9 364 73.1
Thecc.01G315700 Theobroma cacao HOM05D005172 ORTHO05D006324 2.8e-160 568.9 365 72.6
FAN19G1206 Fragaria x ananassa HOM05D005172 ORTHO05D006324 6.1e-160 567.8 361 72.3
Dinv24461 Davidia involucrata HOM05D005172 ORTHO05D006324 8.0e-160 567.4 366 71.0
FAN24G1196 Fragaria x ananassa HOM05D005172 ORTHO05D006324 1.0e-159 567.0 364 72.5
FAN24G2042 Fragaria x ananassa HOM05D005172 ORTHO05D006324 1.0e-159 567.0 364 72.5
Prupe.8G000200 Prunus persica HOM05D005172 ORTHO05D006324 3.0e-159 565.5 364 72.0
Nn4g25569 Nelumbo nucifera HOM05D005172 ORTHO05D006324 6.8e-159 564.3 365 69.3
Cfa005774 Carpinus fangiana HOM05D005172 ORTHO05D006324 1.2e-158 563.5 370 71.1
PGR044G0670 Punica granatum HOM05D005172 ORTHO05D006324 1.5e-158 563.1 355 71.8
Duzib211G0527 Durio zibethinus HOM05D005172 ORTHO05D006324 2.0e-158 562.8 362 71.0
TAR362G0256 Trochodendron aralioides HOM05D005172 ORTHO05D006324 5.7e-158 561.2 365 70.1
MD07G1000100 Malus domestica HOM05D005172 ORTHO05D006324 2.8e-157 558.9 361 71.5
Dinv30897 Davidia involucrata HOM05D005172 ORTHO05D006324 3.7e-157 558.5 364 70.1
Hma1.2p1_0008F-1.1_g005570 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 2.4e-156 555.8 368 69.3
QL12p019456 Quercus lobata HOM05D005172 ORTHO05D006324 2.4e-156 555.8 361 69.8
Haze_05066 Corylus avellana HOM05D005172 ORTHO05D006324 3.5e-155 552.0 354 71.5
Sabra14G0088100 Salix brachista HOM05D005172 ORTHO05D006324 8.6e-154 547.4 364 69.2
Manes.05G014300 Manihot esculenta HOM05D005172 ORTHO05D006324 1.1e-153 547.0 362 68.5
AL5G45130 Arabidopsis lyrata HOM05D005172 ORTHO05D006324 1.9e-153 546.2 368 67.9
Potri.014G118600 Populus trichocarpa HOM05D005172 ORTHO05D006324 2.1e-152 542.7 350 72.3
BolC6t37994H Brassica oleracea HOM05D005172 ORTHO05D006324 2.8e-152 542.3 368 66.6
AT3G62370 Arabidopsis thaliana HOM05D005172 ORTHO05D006324 3.6e-152 542.0 368 67.4
GSVIVG01031247001 Vitis vinifera HOM05D005172 ORTHO05D006324 3.6e-152 542.0 364 66.8
Aa31LG10G16300 Aethionema arabicum HOM05D005172 ORTHO05D006324 6.1e-152 541.2 363 68.0
Thhalv10006054m.g Eutrema salsugineum HOM05D005172 ORTHO05D006324 1.0e-151 540.4 368 66.6
A07p25960 Brassica napus HOM05D005172 ORTHO05D006324 1.4e-151 540.0 368 65.8
Manes.01G229300 Manihot esculenta HOM05D005172 ORTHO05D006324 1.4e-151 540.0 363 68.6
CSS0017820 Camellia sinensis var. sinensis HOM05D005172 ORTHO05D006324 1.8e-151 539.7 365 67.4
Sp5g01030 Schrenkiella parvula HOM05D005172 ORTHO05D006324 2.3e-151 539.3 364 67.0
Eucgr.H01000 Eucalyptus grandis HOM05D005172 ORTHO05D006324 4.0e-151 538.5 348 69.5
BcaC08g45198 Brassica carinata HOM05D005172 ORTHO05D006324 5.2e-151 538.1 368 66.0
C06p28240 Brassica napus HOM05D005172 ORTHO05D006324 5.2e-151 538.1 368 66.0
BraA07t30243Z Brassica rapa HOM05D005172 ORTHO05D006324 8.9e-151 537.3 368 65.5
Carub.0005s2909 Capsella rubella HOM05D005172 ORTHO05D006324 2.6e-150 535.8 368 65.5
CARHR172700 Cardamine hirsuta HOM05D005172 ORTHO05D006324 2.6e-150 535.8 369 66.4
CANSAT25G1511 Cannabis sativa HOM05D005172 ORTHO05D006324 3.7e-149 531.9 370 67.6
BcaB02g07340 Brassica carinata HOM05D005172 ORTHO05D006324 4.9e-149 531.6 368 65.5
FvH4_2g00030 Fragaria vesca HOM05D005172 ORTHO05D006324 6.4e-149 531.2 314 77.7
Lju926A5G28 Lonicera japonica HOM05D005172 ORTHO05D006324 1.2e-147 526.9 366 65.6
Aqoxy2G02725 Aquilegia oxysepala HOM05D005172 ORTHO05D006324 1.0e-146 523.9 364 65.4
TAR633G1620 Trochodendron aralioides HOM05D005172 ORTHO05D006324 8.6e-146 520.8 315 73.0
Cc02_g35150 Coffea canephora HOM05D005172 ORTHO05D006324 1.1e-145 520.4 357 64.4
Manes.05G011070 Manihot esculenta HOM05D005172 ORTHO05D006324 1.9e-145 519.6 332 69.9
DCAR_001909 Daucus carota HOM05D005172 ORTHO05D006324 7.3e-145 517.7 362 65.5
MSTRG.21697 Avicennia marina HOM05D005172 ORTHO05D006324 1.6e-144 516.5 370 63.0
MBI18_g32028_MAGBIO Magnolia biondii HOM05D005172 ORTHO05D006324 1.6e-144 516.5 364 64.6
Manes.05G005607 Manihot esculenta HOM05D005172 ORTHO05D006324 1.6e-144 516.5 324 71.0
Manes.08G002402 Manihot esculenta HOM05D005172 ORTHO05D006324 2.1e-144 516.2 324 71.0
Manes.05G014725 Manihot esculenta HOM05D005172 ORTHO05D006324 1.1e-143 513.8 323 70.6
Ah.01g003950 Amaranthus hybridus HOM05D005172 ORTHO05D006324 2.3e-143 512.7 363 66.7
PGSC0003DMG400009049 Solanum tuberosum HOM05D005172 ORTHO05D006324 5.2e-143 511.5 358 64.0
SGA_v2.0_scaffold334G49079 Striga asiatica HOM05D005172 ORTHO05D006324 1.2e-142 510.4 363 64.7
Nitab4.5_0001338g0130 Nicotiana tabacum HOM05D005172 ORTHO05D006324 2.0e-142 509.6 358 62.8
Sc17g0000390 Simmondsia chinensis HOM05D005172 ORTHO05D006324 3.4e-142 508.8 361 64.5
Nitab4.5_0011508g0010 Nicotiana tabacum HOM05D005172 ORTHO05D006324 4.4e-142 508.4 365 61.9
PSO761G0644 Papaver somniferum HOM05D005172 ORTHO05D006324 4.4e-142 508.4 361 64.0
CsaV3_7G030060 Cucumis sativus L. HOM05D005172 ORTHO05D006324 7.5e-142 507.7 353 67.1
Peaxi162Scf01061g00133 Petunia axillaris HOM05D005172 ORTHO05D006324 9.8e-142 507.3 363 63.1
EL10As5g23554 Beta vulgaris HOM05D005172 ORTHO05D006324 2.9e-141 505.8 345 67.5
Hund09645 Selenicereus undatus HOM05D005172 ORTHO05D006324 4.9e-141 505.0 363 64.5
SalBow3G3203 Salvia bowleyana HOM05D005172 ORTHO05D006324 1.1e-140 503.8 359 63.0
Solyc01g079310.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 1.9e-140 503.1 344 65.4
Solyc01g100590.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 3.2e-140 502.3 361 61.8
Sopen01g031090 Solanum pennellii HOM05D005172 ORTHO05D006324 5.4e-140 501.5 358 62.8
Sopen01g044090 Solanum pennellii HOM05D005172 ORTHO05D006324 7.1e-140 501.1 359 61.8
DCAR_018281 Daucus carota HOM05D005172 ORTHO05D006324 9.2e-140 500.7 359 65.5
CAN.G293.20 Capsicum annuum HOM05D005172 ORTHO05D006324 2.1e-139 499.6 358 62.6
PGSC0003DMG400002764 Solanum tuberosum HOM05D005172 ORTHO05D006324 4.6e-139 498.4 359 61.8
CAN.G1076.20 Capsicum annuum HOM05D005172 ORTHO05D006324 7.8e-139 497.7 365 60.3
Gohir.D12G127500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 7.8e-139 497.7 366 65.0
Sed0009537 Sechium edule HOM05D005172 ORTHO05D006324 1.0e-138 497.3 358 64.8
AUR62031944 Chenopodium quinoa HOM05D005172 ORTHO05D006324 2.3e-138 496.1 360 64.7
vmacro01567 Vaccinium macrocarpon HOM05D005172 ORTHO05D006324 2.3e-138 496.1 453 53.2
AUR62022232 Chenopodium quinoa HOM05D005172 ORTHO05D006324 3.9e-138 495.4 360 64.2
Gorai.008G138400 Gossypium raimondii HOM05D005172 ORTHO05D006324 5.1e-138 495.0 366 64.8
ATR0693G418 Amborella trichopoda HOM05D005172 ORTHO05D006324 8.6e-138 494.2 364 62.6
Rhsim11G0096600 Rhododendron simsii HOM05D005172 ORTHO05D006324 2.8e-136 489.2 455 53.2
Ah.02g112400 Amaranthus hybridus HOM05D005172 ORTHO05D006324 1.4e-135 486.9 399 58.6
Oeu018081.1 Olea europaea HOM05D005172 ORTHO05D006324 5.8e-134 481.5 365 60.8
HPP92_002597 Vanilla planifolia HOM05D005172 ORTHO05D006324 2.2e-133 479.6 366 60.7
MSTRG.20376 Avicennia marina HOM05D005172 ORTHO05D006324 4.1e-132 475.3 359 60.4
CDE08G0763 Ceratophyllum demersum HOM05D005172 ORTHO05D006324 1.0e-130 470.7 369 58.8
Migut.B00958 Erythranthe guttata HOM05D005172 ORTHO05D006324 1.0e-130 470.7 363 59.5
arahy.Tifrunner.gnm1.ann1.2XA8QH Arachis hypogaea HOM05D005172 ORTHO05D006324 4.3e-129 465.3 268 79.1
ClCG09G005000 Citrullus lanatus HOM05D005172 ORTHO05D006324 1.2e-128 463.8 359 62.1
Cpa.g.sc18.70 Carica papaya HOM05D005172 ORTHO05D006324 2.1e-128 463.0 358 62.0
Os03g0309000 Oryza sativa ssp. japonica HOM05D005172 ORTHO05D006324 6.8e-127 458.0 336 62.8
MELO3C015915.2 Cucumis melo HOM05D005172 ORTHO05D006324 3.4e-126 455.7 365 60.8
Manes.05G008035 Manihot esculenta HOM05D005172 ORTHO05D006324 9.3e-124 447.6 280 71.1
Manes.05G006214 Manihot esculenta HOM05D005172 ORTHO05D006324 1.2e-123 447.2 280 71.1
Zm00001eb014830 Zea mays HOM05D005172 ORTHO05D006324 1.2e-123 447.2 365 57.8
THA.LOC104827661 Tarenaya hassleriana HOM05D005172 ORTHO05D006324 2.1e-123 446.4 269 75.1
Manes.05G012891 Manihot esculenta HOM05D005172 ORTHO05D006324 7.8e-123 444.5 280 70.7
Actinidia16862 Actinidia chinensis HOM05D005172 ORTHO05D006324 1.5e-121 440.3 315 63.5
SalBow7G2322 Salvia bowleyana HOM05D006337 ORTHO05D008050 4.2e-116 422.2 365 55.1
SEGI_40738 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 9.0e-111 404.4 354 54.0
FAN20G2313 Fragaria x ananassa HOM05D005172 ORTHO05D006324 8.7e-106 387.9 231 77.5
HPP92_012811 Vanilla planifolia HOM05D005172 ORTHO05D006324 4.3e-105 385.6 288 60.4
FAN20G2797 Fragaria x ananassa HOM05D005172 ORTHO05D006324 5.6e-105 385.2 251 72.1
TPR.G38637 Trifolium pratense HOM05D005172 ORTHO05D006324 1.7e-101 373.6 192 89.1
Lalb_Chr06g0166961 Lupinus albus HOM05D005172 ORTHO05D006324 1.1e-100 370.9 205 81.5
unitig_0.g2227 Utricularia gibba HOM05D005172 ORTHO05D003916 2.5e-100 369.8 275 57.5
Hma1.2p1_3280F.1_g334820 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 2.7e-99 366.3 324 56.5
Nitab4.5_0003540g0100 Nicotiana tabacum HOM05D005172 ORTHO05D006324 4.8e-96 355.5 233 67.8
Mapoly0070s0043 Marchantia polymorpha HOM05D005172 ORTHO05D006324 3.1e-95 352.8 359 48.2
Ciclev10020948m.g Citrus clementina HOM05D005172 ORTHO05D006324 7.2e-92 341.7 205 75.1
SEGI_37594 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 4.1e-87 325.9 272 54.4
Nitab4.5_0006240g0010 Nicotiana tabacum HOM05D005172 ORTHO05D006324 6.9e-87 325.1 338 49.4
SMO119G0084 Selaginella moellendorffii HOM05D005172 ORTHO05D006324 1.0e-85 321.2 369 45.0
Oeu000005.1 Olea europaea HOM05D005172 ORTHO05D006324 2.5e-84 316.6 232 62.9
Pp3c15_10420 Physcomitrium patens HOM05D005172 ORTHO05D006324 7.2e-84 315.1 350 44.6
Pp3c9_8970 Physcomitrium patens HOM05D005172 ORTHO05D006324 2.1e-83 313.5 361 44.0
AagrBONN_evm.TU.Sc2ySwM_228.5181 Anthoceros agrestis HOM05D005172 ORTHO05D006324 6.3e-80 302.0 312 46.5
COL.COLO4_23212 Corchorus olitorius HOM05D005172 ORTHO05D006324 4.5e-78 295.8 184 73.9
Gohir.A12G123800 Gossypium hirsutum HOM05D005172 ORTHO05D006324 1.1e-76 291.2 209 66.5
Ciclev10024074m.g Citrus clementina HOM05D005172 ORTHO05D006324 9.4e-76 288.1 201 67.2
Lalb_Chr06g0166951 Lupinus albus HOM05D005172 ORTHO05D006324 3.0e-74 283.1 158 84.2
Ciclev10023330m.g Citrus clementina HOM05D005172 ORTHO05D006324 1.6e-62 244.2 155 72.9
Peaxi162Scf00691g00617 Petunia axillaris HOM05D005172 ORTHO05D006324 2.7e-62 243.4 239 51.9
Oeu008479.1 Olea europaea HOM05D005172 ORTHO05D006324 1.8e-42 177.6 145 55.9
TPR.G38640 Trifolium pratense HOM05D005172 ORTHO05D006324 3.5e-38 163.3 107 73.8
CBR_g51501 Chara braunii HOM05D005172 ORTHO05D006324 6.6e-37 159.1 222 39.6
COL.COLO4_23213 Corchorus olitorius HOM05D005172 ORTHO05D006324 6.4e-32 142.5 100 66.0
Ciclev10023884m.g Citrus clementina HOM05D005172 ORTHO05D006324 1.1e-31 141.7 109 66.1
CAN.G1071.4 Capsicum annuum HOM05D005172 ORTHO05D006324 4.6e-22 109.8 101 50.5
SMO163G0002 Selaginella moellendorffii HOM05D005172 ORTHO05D006324 7.8e-22 109.0 101 46.5
CBR_g51503 Chara braunii HOM05D005172 ORTHO05D006324 3.3e-12 77.0 126 31.7
GSVIVG01037608001 Vitis vinifera HOM05D005172 ORTHO05D439154 1.3e-08 65.1 130 33.1


User provided reference genes

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