Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G211500 Phaseolus vulgaris HOM05D024167 ORTHO05D009202 2.0e-56 222.2 116 100.0
VMungo0720G1850 Vigna mungo HOM05D024167 ORTHO05D009202 6.1e-37 157.5 117 75.2
Glyma.02G009400 Glycine max HOM05D024167 ORTHO05D009202 3.8e-31 138.3 117 64.1
Lj5g0018092 Lotus japonicus HOM05D008942 ORTHO05D009202 2.9e-15 85.5 135 47.4
TPR.G3019 Trifolium pratense HOM05D008942 ORTHO05D009202 2.9e-15 85.5 128 46.1
Psat0s802g0040 Pisum sativum HOM05D024167 ORTHO05D009202 9.4e-14 80.5 108 48.1
Medtr1g086430 Medicago truncatula HOM05D024167 ORTHO05D009202 1.4e-12 76.6 107 46.7
QL12p033964 Quercus lobata HOM05D008942 ORTHO05D009202 4.8e-10 68.2 122 39.3
Thecc.01G321000 Theobroma cacao HOM05D008942 ORTHO05D009202 1.6e-08 63.2 121 42.1
CSS0022072 Camellia sinensis var. sinensis HOM05D009264 ORTHO05D009202 2.7e-08 62.4 111 39.6
CSS0039740 Camellia sinensis var. sinensis HOM05D009264 ORTHO05D009202 2.7e-08 62.4 111 39.6
Sabra02G0164800 Salix brachista HOM05D008942 ORTHO05D009202 2.7e-08 62.4 124 34.7
Potri.002G190700 Populus trichocarpa HOM05D008942 ORTHO05D009202 3.5e-08 62.0 125 36.0
CiPaw.07G122200 Carya illinoinensis HOM05D008942 ORTHO05D009202 5.9e-08 61.2 125 38.4
Sabra14G0085900 Salix brachista HOM05D008942 ORTHO05D009202 5.9e-08 61.2 121 36.4
Cfa004866 Carpinus fangiana HOM05D008942 ORTHO05D009202 1.3e-07 60.1 95 34.7
Hma1.2p1_0052F.1_g030560 Hydrangea macrophylla HOM05D009264 ORTHO05D009202 1.3e-07 60.1 138 34.8
CiPaw.07G122100 Carya illinoinensis HOM05D008942 ORTHO05D009202 1.7e-07 59.7 136 35.3
RcHm_v2.0_Chr3g0457951 Rosa chinensis HOM05D009264 ORTHO05D009202 5.0e-07 58.2 115 36.5
CiPaw.08G085100 Carya illinoinensis HOM05D008942 ORTHO05D009202 8.6e-07 57.4 131 37.4
Haze_05106 Corylus avellana HOM05D008942 ORTHO05D009202 1.1e-06 57.0 96 42.7
QL12p034826 Quercus lobata HOM05D008942 ORTHO05D009202 1.1e-06 57.0 121 38.0
QL12p033984 Quercus lobata HOM05D008942 ORTHO05D009202 1.5e-06 56.6 129 34.1
MD17G1279600 Malus domestica HOM05D008942 ORTHO05D009202 2.5e-06 55.8 93 35.5
CiPaw.08G152800 Carya illinoinensis HOM05D009264 ORTHO05D009202 3.3e-06 55.5 120 35.8
Potri.014G115800 Populus trichocarpa HOM05D008942 ORTHO05D009202 3.3e-06 55.5 129 37.2
Manes.01G232300 Manihot esculenta HOM05D008942 ORTHO05D009202 7.2e-06 54.3 105 37.1
Gorai.004G049600 Gossypium raimondii HOM05D008325 ORTHO05D010336 9.5e-06 53.9 114 38.6
TWI59G1203 Tripterygium wilfordii HOM05D008942 ORTHO05D009202 9.5e-06 53.9 77 41.6


User provided reference genes

Program Settings