Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G206900 Phaseolus vulgaris HOM05D008878 ORTHO05D010972 1.9e-50 202.2 102 100.0
Glyma.10G141300 Glycine max HOM05D008878 ORTHO05D010972 1.6e-44 182.6 101 88.1
Glyma.20G089900 Glycine max HOM05D008878 ORTHO05D010972 1.0e-43 179.9 101 88.1
Lalb_Chr02g0147361 Lupinus albus HOM05D008878 ORTHO05D010972 5.7e-39 164.1 101 79.2
Psat6g156760 Pisum sativum HOM05D008878 ORTHO05D010972 5.5e-34 147.5 101 76.2
Lj5g0023056 Lotus japonicus HOM05D008878 ORTHO05D010972 9.4e-34 146.7 104 77.9
Medtr1g085190 Medicago truncatula HOM05D008878 ORTHO05D010972 1.4e-32 142.9 103 78.6
TPR.G3072 Trifolium pratense HOM05D008878 ORTHO05D010972 5.2e-32 141.0 103 78.6
QL03p011407 Quercus lobata HOM05D008878 ORTHO05D010972 1.3e-27 126.3 101 66.3
Eucgr.H01348 Eucalyptus grandis HOM05D008878 ORTHO05D010972 8.0e-25 117.1 101 57.4
Prupe.6G302300 Prunus persica HOM05D008878 ORTHO05D010972 7.5e-23 110.5 96 59.4
Cfa004402 Carpinus fangiana HOM05D008878 ORTHO05D010972 3.7e-22 108.2 101 56.4
Manes.08G105922 Manihot esculenta HOM05D008878 ORTHO05D010972 7.3e-18 94.0 111 53.2
FAN05G4981 Fragaria x ananassa HOM05D008878 ORTHO05D010972 3.6e-17 91.7 90 55.6
FAN05G5213 Fragaria x ananassa HOM05D008878 ORTHO05D010972 3.6e-17 91.7 90 55.6
FAN02G1425 Fragaria x ananassa HOM05D008878 ORTHO05D010972 1.0e-16 90.1 90 55.6
FAN09G4214 Fragaria x ananassa HOM05D008878 ORTHO05D010972 1.0e-16 90.1 90 54.4
Nitab4.5_0000081g0040 Nicotiana tabacum HOM05D008878 ORTHO05D010972 8.9e-16 87.0 98 50.0
Hma1.2p1_0052F.1_g030230 Hydrangea macrophylla HOM05D008878 ORTHO05D010972 2.0e-15 85.9 103 44.7
Nitab4.5_0006193g0030 Nicotiana tabacum HOM05D008878 ORTHO05D010972 2.0e-15 85.9 98 54.1
Peaxi162Scf00035g00092 Petunia axillaris HOM05D008878 ORTHO05D010972 9.8e-15 83.6 92 52.2
Solyc01g102420.1 Solanum lycopersicum HOM05D008878 ORTHO05D010972 1.3e-14 83.2 104 47.1
Nitab4.5_0010076g0010 Nicotiana tabacum HOM05D008878 ORTHO05D010972 1.7e-14 82.8 93 51.6
Oeu033223.1 Olea europaea HOM05D008878 ORTHO05D010972 1.7e-14 82.8 95 47.4
Nitab4.5_0004090g0010 Nicotiana tabacum HOM05D008878 ORTHO05D010972 1.4e-13 79.7 103 47.6
PGSC0003DMG400018274 Solanum tuberosum HOM05D008878 ORTHO05D010972 3.2e-13 78.6 97 47.4
Sopen01g044870 Solanum pennellii HOM05D008878 ORTHO05D010972 7.0e-13 77.4 97 47.4
Lsat_1_v5_gn_5_146741 Lactuca sativa HOM05D008878 ORTHO05D010972 2.0e-12 75.9 101 45.5
DCAR_022332 Daucus carota HOM05D008878 ORTHO05D010972 6.6e-11 70.9 95 44.2
Rhsim11G0107100 Rhododendron simsii HOM05D008878 ORTHO05D010972 8.6e-11 70.5 109 46.8
Lsat_1_v5_gn_9_83921 Lactuca sativa HOM05D008878 ORTHO05D010972 1.2e-09 66.6 105 39.0
Potri.005G001001 Populus trichocarpa HOM05D008878 ORTHO05D010972 1.6e-09 66.2 95 45.3
Migut.B00909 Erythranthe guttata HOM05D008878 ORTHO05D010972 2.1e-09 65.9 101 40.6
Actinidia11704 Actinidia chinensis HOM05D008878 ORTHO05D010972 2.8e-09 65.5 50 68.0
Ciclev10029949m.g Citrus clementina HOM05D008878 ORTHO05D010972 8.0e-09 63.9 89 48.3
EL10Ac6g15322 Beta vulgaris HOM05D059084 ORTHO05D010972 4.0e-08 61.6 112 38.4
TAR365G0428 Trochodendron aralioides HOM05D008878 ORTHO05D010972 6.8e-08 60.8 106 41.5
Actinidia11703 Actinidia chinensis HOM05D008878 ORTHO05D010972 2.0e-07 59.3 58 56.9
AUR62017867 Chenopodium quinoa HOM05D059084 ORTHO05D010972 3.7e-06 55.1 115 34.8


User provided reference genes

Program Settings