Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G204200 Phaseolus vulgaris HOM05D010135 ORTHO05D011377 1.2e-49 199.5 99 100.0
VMungo0720G3097 Vigna mungo HOM05D001037 ORTHO05D011377 3.6e-38 161.4 90 93.3
Glyma.20G093300 Glycine max HOM05D010135 ORTHO05D011377 7.8e-33 143.7 102 79.4
Glyma.10G144400 Glycine max HOM05D010135 ORTHO05D011377 8.9e-29 130.2 102 74.5
Lj5g0007613 Lotus japonicus HOM05D010135 ORTHO05D011377 3.3e-23 111.7 102 63.7
arahy.Tifrunner.gnm1.ann1.XF9LE9 Arachis hypogaea HOM05D005057 ORTHO05D011377 3.5e-17 91.7 93 53.8
Lalb_Chr21g0310111 Lupinus albus HOM05D010135 ORTHO05D011377 1.0e-16 90.1 101 52.5
Prupe.6G306400 Prunus persica HOM05D010135 ORTHO05D011377 2.5e-15 85.5 103 51.5
MD12G1201300 Malus domestica HOM05D010135 ORTHO05D011377 2.8e-14 82.0 98 53.1
QL03p009441 Quercus lobata HOM05D010135 ORTHO05D011377 2.8e-14 82.0 91 54.9
QL93p2005_0018 Quercus lobata HOM05D010135 ORTHO05D011377 2.8e-14 82.0 91 54.9
Haze_04005 Corylus avellana HOM05D010135 ORTHO05D011377 8.1e-14 80.5 107 52.3
Psat6g155320 Pisum sativum HOM05D029395 ORTHO05D011377 2.6e-12 75.5 104 52.9
RcHm_v2.0_Chr3g0458221 Rosa chinensis HOM05D008705 ORTHO05D011377 7.5e-12 73.9 105 45.7
TPR.G2617 Trifolium pratense HOM05D029395 ORTHO05D011377 2.2e-11 72.4 106 53.8
Medtr1g084780 Medicago truncatula HOM05D029395 ORTHO05D011377 2.9e-11 72.0 96 51.0
Dinv24500 Davidia involucrata HOM05D001037 ORTHO05D000888 8.3e-11 70.5 86 52.3
FvH4_6g08340 Fragaria vesca HOM05D008705 ORTHO05D011377 2.4e-10 68.9 109 43.1
FAN14G0920 Fragaria x ananassa HOM05D008705 ORTHO05D011377 2.4e-10 68.9 109 43.1
Thecc.05G328000 Theobroma cacao HOM05D010135 ORTHO05D011377 2.4e-10 68.9 93 48.4
GSVIVG01031312001 Vitis vinifera HOM05D000039 ORTHO05D000815 1.6e-09 66.2 77 53.2
FAN09G1129 Fragaria x ananassa HOM05D008705 ORTHO05D000669 7.8e-09 63.9 98 42.9
Sabra13G0003500 Salix brachista HOM05D010135 ORTHO05D011377 1.3e-08 63.2 91 47.3
Potri.013G004300 Populus trichocarpa HOM05D010135 ORTHO05D011377 2.3e-08 62.4 91 46.2
Ca_10192_v3 Cicer arietinum L. HOM05D029395 ORTHO05D011377 3.0e-08 62.0 102 47.1
Gohir.A13G177500 Gossypium hirsutum HOM05D010135 ORTHO05D011377 1.5e-07 59.7 91 44.0
Gohir.D13G184100 Gossypium hirsutum HOM05D010135 ORTHO05D011377 1.5e-07 59.7 91 44.0
Gorai.013G209400 Gossypium raimondii HOM05D010135 ORTHO05D011377 1.5e-07 59.7 91 44.0
Potri.005G004800 Populus trichocarpa HOM05D010135 ORTHO05D011377 2.5e-07 58.9 99 44.4
Sabra05G0001400 Salix brachista HOM05D010135 ORTHO05D011377 2.5e-07 58.9 99 46.5
Sabra05G0015500 Salix brachista HOM05D010135 ORTHO05D011377 2.5e-07 58.9 99 46.5
COL.COLO4_05504 Corchorus olitorius HOM05D003136 ORTHO05D003562 5.6e-07 57.8 90 44.4
Aqoxy2G02560 Aquilegia oxysepala HOM05D010135 ORTHO05D011377 7.3e-07 57.4 86 47.7


User provided reference genes

Program Settings