Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 1.1e-147 526.6 258 100.0
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 3.5e-125 451.8 254 87.4
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 2.8e-119 432.2 254 83.5
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 2.8e-114 415.6 261 78.9
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 4.4e-112 408.3 268 77.2
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 2.1e-106 389.4 267 76.8
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 3.1e-105 385.6 269 73.2
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 3.1e-105 385.6 269 72.1
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 5.2e-105 384.8 247 76.1
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 1.5e-104 383.3 260 75.8
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 2.6e-104 382.5 263 73.0
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 7.5e-104 380.9 272 71.0
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 1.3e-103 380.2 270 70.7
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 2.2e-103 379.4 258 73.6
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 6.4e-103 377.9 268 72.0
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 6.4e-103 377.9 258 73.3
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 8.3e-103 377.5 263 73.8
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 3.2e-102 375.6 254 72.8
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 5.4e-102 374.8 266 72.6
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 5.4e-102 374.8 266 72.6
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 2.7e-101 372.5 214 82.7
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 4.6e-101 371.7 265 69.8
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 4.6e-101 371.7 267 73.4
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 6.0e-101 371.3 210 82.9
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 7.8e-101 370.9 267 71.9
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 1.7e-100 369.8 232 78.0
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 3.0e-100 369.0 223 79.4
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 3.9e-100 368.6 239 76.2
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 8.6e-100 367.5 265 72.1
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 1.1e-99 367.1 266 71.8
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 1.5e-99 366.7 270 69.3
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 5.6e-99 364.8 268 68.3
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 5.6e-99 364.8 212 82.1
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 5.6e-99 364.8 276 68.5
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 5.6e-99 364.8 259 70.3
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 9.5e-99 364.0 214 80.4
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 9.5e-99 364.0 270 68.1
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 1.2e-98 363.6 236 75.4
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 4.7e-98 361.7 266 69.2
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 8.1e-98 360.9 212 81.1
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 1.1e-97 360.5 266 70.3
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 4.0e-97 358.6 274 68.2
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 6.8e-97 357.8 265 68.3
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 8.9e-97 357.5 210 81.0
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 8.9e-97 357.5 287 65.5
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 2.0e-96 356.3 280 65.7
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 4.4e-96 355.1 255 69.0
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 1.7e-95 353.2 242 72.7
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 1.7e-95 353.2 220 77.7
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 6.4e-95 351.3 233 75.1
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 6.4e-95 351.3 270 68.5
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 1.1e-94 350.5 210 78.1
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 1.1e-94 350.5 214 79.4
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 2.4e-94 349.4 214 79.0
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 7.1e-94 347.8 252 67.5
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 9.2e-94 347.4 279 66.7
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 2.7e-93 345.9 254 67.3
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 4.6e-93 345.1 249 68.7
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 7.8e-93 344.4 254 67.7
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 7.8e-93 344.4 254 67.7
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 7.8e-93 344.4 255 68.6
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 1.0e-92 344.0 229 74.7
VMungo0720G2022 Vigna mungo HOM05D006169 ORTHO05D007698 2.3e-92 342.8 248 73.4
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 8.6e-92 340.9 255 66.7
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 8.6e-92 340.9 206 78.2
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 8.6e-92 340.9 247 68.0
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 1.1e-91 340.5 247 67.6
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 1.1e-91 340.5 250 66.8
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 1.5e-91 340.1 263 65.8
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 3.3e-91 339.0 254 66.5
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 1.1e-89 334.0 213 75.1
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 1.4e-89 333.6 257 65.8
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 3.1e-89 332.4 215 74.4
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 5.2e-89 331.6 269 65.8
TPR.G17714 Trifolium pratense HOM05D006169 ORTHO05D007698 3.4e-88 328.9 176 86.4
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 1.7e-87 326.6 248 69.8
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 2.2e-87 326.2 248 66.9
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 3.2e-86 322.4 269 63.6
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 7.8e-85 317.8 249 66.3
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 8.6e-84 314.3 253 63.2
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 1.1e-83 313.9 214 72.0
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 1.9e-83 313.2 273 63.0
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 4.3e-83 312.0 249 67.1
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 5.6e-83 311.6 220 70.0
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 7.3e-83 311.2 314 57.3
FAN14G4015 Fragaria x ananassa HOM05D006169 ORTHO05D007698 6.2e-82 308.1 171 83.0
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 2.4e-81 306.2 187 80.7
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 2.0e-80 303.1 231 67.5
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 5.8e-80 301.6 242 62.8
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 9.9e-80 300.8 239 65.3
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 1.1e-78 297.4 214 70.1
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 2.4e-78 296.2 350 50.6
AUR62005238 Chenopodium quinoa HOM05D006169 ORTHO05D007698 7.1e-78 294.7 169 79.3
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 6.6e-76 288.1 185 76.8
CDE11G0042 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 3.1e-73 279.3 223 61.0
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 3.4e-72 275.8 201 72.6
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 4.4e-72 275.4 188 78.2
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 7.1e-70 268.1 186 68.8
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 2.7e-69 266.2 192 72.4
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 8.7e-68 261.2 195 63.6
Mapoly0065s0090 Marchantia polymorpha HOM05D006169 ORTHO05D007698 6.9e-65 251.5 195 60.0
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 1.3e-63 247.3 169 74.0
Nitab4.5_0000005g0540 Nicotiana tabacum HOM05D006169 ORTHO05D007698 4.0e-57 225.7 133 82.7
CBR_g8203 Chara braunii HOM05D006169 ORTHO05D007698 1.2e-56 224.2 209 54.1
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 4.2e-54 215.7 149 73.2
Glyma.20G237950 Glycine max HOM05D006169 ORTHO05D007698 5.5e-54 215.3 120 85.0
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 3.5e-53 212.6 152 65.8
Cre12.g508350 Chlamydomonas reinhardtii HOM05D006169 ORTHO05D007698 3.0e-52 209.5 179 55.3
SMO358G0244 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 2.1e-50 203.4 179 53.1
TAR365G0132 Trochodendron aralioides HOM05D002548 ORTHO05D003031 6.7e-44 181.8 262 43.9
MCO01G635 Micromonas commoda HOM05D006169 ORTHO05D007698 1.5e-40 170.6 183 50.3
arahy.Tifrunner.gnm1.ann1.91HID7 Arachis hypogaea HOM05D006169 ORTHO05D007698 2.7e-37 159.8 123 66.7
arahy.Tifrunner.gnm1.ann1.Z5NCG3 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.1e-35 154.5 81 87.7
arahy.Tifrunner.gnm1.ann1.W0CMT4 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.5e-32 144.1 76 86.8
PGSC0003DMG400043741 Solanum tuberosum HOM05D006169 ORTHO05D007698 2.6e-32 143.3 118 61.0
RcHm_v2.0_Chr1g0332671 Rosa chinensis HOM05D006169 ORTHO05D007698 3.9e-28 129.4 69 85.5
SMO117G0309 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 4.4e-27 125.9 116 44.8
PRCOL_00000586 Prasinoderma coloniale HOM05D006169 ORTHO05D007698 1.2e-24 117.9 181 37.6
Sabra13G0011100 Salix brachista HOM05D006169 ORTHO05D007698 7.7e-24 115.2 169 45.6
arahy.Tifrunner.gnm1.ann1.CWA5R2 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.5e-22 110.9 58 86.2
MSTRG.5122 Avicennia marina HOM05D006169 ORTHO05D007698 1.8e-20 104.0 64 78.1
CSS0040457 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 3.1e-17 93.2 51 86.3
CSS0014495 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 2.0e-16 90.5 106 51.9
arahy.Tifrunner.gnm1.ann1.4I5A07 Arachis hypogaea HOM05D000158 ORTHO05D003614 2.2e-15 87.0 51 78.4
arahy.Tifrunner.gnm1.ann1.C5NY6B Arachis hypogaea HOM05D006169 ORTHO05D007698 2.2e-15 87.0 64 65.6
arahy.Tifrunner.gnm1.ann1.GNZ56J Arachis hypogaea HOM05D006169 ORTHO05D007698 4.7e-13 79.3 44 79.5
Os01g0343500 Oryza sativa ssp. japonica HOM05D006169 ORTHO05D007698 2.6e-11 73.6 83 49.4


User provided reference genes

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