Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 3.6e-80 301.6 162 100.0
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 4.3e-73 278.1 162 90.1
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 5.5e-68 261.2 165 86.7
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 6.0e-59 231.1 165 79.4
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 3.9e-58 228.4 164 75.0
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 6.7e-58 227.6 167 72.5
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 9.3e-52 207.2 179 65.9
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 2.7e-51 205.7 167 70.1
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 1.5e-49 199.9 168 68.5
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 1.3e-48 196.8 168 67.9
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 1.2e-46 190.3 176 64.2
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 1.5e-46 189.9 170 65.3
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 2.2e-45 186.0 179 59.2
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 6.5e-45 184.5 180 62.2
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 8.5e-45 184.1 184 59.8
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 2.5e-44 182.6 179 60.9
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 1.2e-43 180.3 173 60.7
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 1.2e-43 180.3 183 57.9
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 1.6e-43 179.9 183 59.6
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 1.4e-42 176.8 175 60.6
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 1.8e-42 176.4 171 62.0
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 2.0e-41 172.9 127 71.7
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 7.4e-41 171.0 176 55.7
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 7.4e-41 171.0 178 57.3
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 1.3e-40 170.2 183 54.1
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 1.3e-40 170.2 175 57.7
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 1.3e-40 170.2 183 59.6
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 2.2e-40 169.5 186 53.8
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 3.7e-40 168.7 178 57.9
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 3.7e-40 168.7 166 62.7
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 4.8e-40 168.3 186 54.3
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 1.1e-39 167.2 172 59.3
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 1.1e-39 167.2 175 57.1
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 1.8e-39 166.4 174 59.2
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 1.8e-39 166.4 177 55.9
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 4.1e-39 165.2 169 58.0
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 4.1e-39 165.2 169 59.2
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 4.1e-39 165.2 175 57.1
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 1.5e-38 163.3 179 57.0
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 2.0e-38 162.9 171 57.9
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 2.0e-38 162.9 175 56.0
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 5.9e-38 161.4 169 58.6
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 1.0e-37 160.6 183 51.9
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 1.7e-37 159.8 169 58.6
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 1.1e-36 157.1 175 54.3
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 1.4e-36 156.8 174 54.6
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 2.5e-36 156.0 182 55.5
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 2.5e-36 156.0 176 57.4
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 3.2e-36 155.6 181 50.8
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 9.4e-36 154.1 173 54.9
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 9.4e-36 154.1 134 66.4
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 1.0e-34 150.6 182 51.1
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 2.3e-34 149.4 190 51.1
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 8.8e-34 147.5 123 65.0
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 8.8e-34 147.5 128 62.5
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 2.6e-33 146.0 179 50.3
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 1.6e-30 136.7 177 53.1
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 1.6e-30 136.7 164 53.0
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 3.5e-30 135.6 114 68.4
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 2.2e-29 132.9 171 49.1
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 2.9e-29 132.5 126 55.6
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 6.5e-29 131.3 170 51.2
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 6.5e-29 131.3 148 53.4
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 8.5e-29 131.0 128 54.7
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 1.1e-28 130.6 126 54.8
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 1.5e-28 130.2 195 45.1
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 2.5e-28 129.4 127 55.9
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 4.2e-28 128.6 127 55.1
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 5.5e-28 128.3 126 54.8
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 7.2e-28 127.9 127 53.5
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 7.2e-28 127.9 126 54.0
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 7.2e-28 127.9 127 54.3
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 1.2e-27 127.1 172 49.4
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 2.1e-27 126.3 126 53.2
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 2.1e-27 126.3 126 53.2
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 2.1e-27 126.3 126 53.2
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 2.7e-27 125.9 126 53.2
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 2.7e-27 125.9 126 53.2
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 5.2e-26 121.7 182 45.1
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.1e-25 120.6 185 45.9
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 1.5e-25 120.2 175 47.4
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.0e-25 119.8 171 47.4
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 4.4e-25 118.6 131 55.0
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 7.5e-25 117.9 171 45.6
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 9.7e-25 117.5 163 50.3
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 9.7e-25 117.5 165 49.7
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 2.2e-24 116.3 125 51.2
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 2.8e-24 115.9 173 48.0
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 6.3e-24 114.8 183 43.7
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 1.4e-23 113.6 146 51.4
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 3.1e-23 112.5 142 52.1
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 7.0e-23 111.3 166 47.0
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 5.9e-22 108.2 183 46.4
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.0e-21 107.5 172 45.9
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 1.3e-21 107.1 167 45.5
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 3.6e-19 99.0 111 51.4
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 4.0e-18 95.5 176 40.3
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 8.3e-16 87.8 124 46.8
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 1.2e-14 84.0 75 61.3
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 1.2e-14 84.0 158 39.9
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 2.7e-14 82.8 184 39.7
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 2.2e-13 79.7 177 37.9
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 4.2e-12 75.5 93 45.2
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 1.2e-11 73.9 177 36.7
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 3.0e-10 69.3 167 40.1
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 7.5e-09 64.7 176 34.7
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 4.9e-08 62.0 177 33.9
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 1.2e-06 57.4 129 34.9


User provided reference genes

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