Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G165450 Phaseolus vulgaris HOM05D004399 ORTHO05D005303 1.5e-34 149.1 79 100.0
Phvul.010G102900 Phaseolus vulgaris HOM05D004399 ORTHO05D005303 4.0e-32 141.0 78 96.2
VMungo0331G0538 Vigna mungo HOM05D004399 ORTHO05D005303 1.5e-31 139.0 78 94.9
Glyma.16G032800 Glycine max HOM05D004399 ORTHO05D005303 3.8e-30 134.4 78 91.0
Ca_08608_v3 Cicer arietinum L. HOM05D004399 ORTHO05D005303 3.2e-29 131.3 78 85.9
Psat3g063920 Pisum sativum HOM05D004399 ORTHO05D005303 3.2e-29 131.3 78 85.9
Ca_25695_v3 Cicer arietinum L. HOM05D004399 ORTHO05D005303 1.6e-28 129.0 78 84.6
SGA_v2.0_scaffold16G07803 Striga asiatica HOM05D004399 ORTHO05D005303 2.1e-28 128.6 78 84.6
Lj1g0019699 Lotus japonicus HOM05D004399 ORTHO05D005303 2.7e-28 128.3 78 85.9
Medtr4g094990 Medicago truncatula HOM05D004399 ORTHO05D005303 4.6e-28 127.5 78 84.6
Dinv34060 Davidia involucrata HOM05D004399 ORTHO05D005303 6.0e-28 127.1 78 84.6
FAN22G0874 Fragaria x ananassa HOM05D004399 ORTHO05D005303 6.0e-28 127.1 78 83.3
TPR.G29232 Trifolium pratense HOM05D004399 ORTHO05D005303 7.8e-28 126.7 78 85.9
Lj6A777T47 Lonicera japonica HOM05D004399 ORTHO05D005303 1.0e-27 126.3 78 84.6
EL10Ac6g15013 Beta vulgaris HOM05D004399 ORTHO05D005303 1.3e-27 125.9 78 83.3
Medtr7g095060 Medicago truncatula HOM05D004399 ORTHO05D005303 1.7e-27 125.6 78 82.1
RcHm_v2.0_Chr4g0438081 Rosa chinensis HOM05D004399 ORTHO05D005303 1.7e-27 125.6 78 82.1
FvH4_4g29830 Fragaria vesca HOM05D004399 ORTHO05D005303 2.3e-27 125.2 78 82.1
FAN12G0059 Fragaria x ananassa HOM05D004399 ORTHO05D005303 2.3e-27 125.2 78 82.1
arahy.Tifrunner.gnm1.ann1.E76E6E Arachis hypogaea HOM05D004399 ORTHO05D005303 3.9e-27 124.4 78 82.1
arahy.Tifrunner.gnm1.ann1.MJW4NY Arachis hypogaea HOM05D004399 ORTHO05D005303 3.9e-27 124.4 78 82.1
Gohir.A03G104700 Gossypium hirsutum HOM05D004399 ORTHO05D005303 5.1e-27 124.0 78 82.1
PGSC0003DMG402028313 Solanum tuberosum HOM05D004399 ORTHO05D005303 5.1e-27 124.0 78 80.8
Cfa008867 Carpinus fangiana HOM05D004399 ORTHO05D005303 6.6e-27 123.6 77 84.4
Haze_11894 Corylus avellana HOM05D004399 ORTHO05D005303 6.6e-27 123.6 77 84.4
Migut.L01179 Erythranthe guttata HOM05D004399 ORTHO05D005303 6.6e-27 123.6 78 82.1
Ah.02g126810 Amaranthus hybridus HOM05D004399 ORTHO05D005303 8.7e-27 123.2 78 82.1
Ah.03g138840 Amaranthus hybridus HOM05D004399 ORTHO05D005303 8.7e-27 123.2 78 83.3
FAN17G2847 Fragaria x ananassa HOM05D004399 ORTHO05D005303 8.7e-27 123.2 78 80.8
Lj3C1029T7 Lonicera japonica HOM05D004399 ORTHO05D005303 8.7e-27 123.2 78 79.5
Sc11g0002530 Simmondsia chinensis HOM05D004399 ORTHO05D005303 8.7e-27 123.2 78 83.3
Cpa.g.sc1.139 Carica papaya HOM05D004399 ORTHO05D005303 1.1e-26 122.9 78 80.8
Hund05832 Selenicereus undatus HOM05D004399 ORTHO05D005303 1.1e-26 122.9 78 80.8
MSTRG.7738 Avicennia marina HOM05D004399 ORTHO05D005303 1.5e-26 122.5 78 80.8
ECA233G2368 Erigeron canadensis HOM05D004399 ORTHO05D005303 1.5e-26 122.5 78 75.6
HanXRQChr12g0363151 Helianthus annuus HOM05D004399 ORTHO05D005303 1.5e-26 122.5 78 75.6
Manes.05G109300 Manihot esculenta HOM05D004399 ORTHO05D005303 1.5e-26 122.5 78 79.5
CiPaw.05G124200 Carya illinoinensis HOM05D004399 ORTHO05D005303 1.9e-26 122.1 78 80.8
PSO832G2862 Papaver somniferum HOM05D004399 ORTHO05D005303 1.9e-26 122.1 78 78.2
TAR622G1336 Trochodendron aralioides HOM05D004399 ORTHO05D005303 1.9e-26 122.1 78 78.2
Atru.chr11.1611 Acer truncatum HOM05D004399 ORTHO05D005303 2.5e-26 121.7 78 79.5
COL.COLO4_27864 Corchorus olitorius HOM05D004399 ORTHO05D005303 2.5e-26 121.7 78 79.5
PSO017G5651 Papaver somniferum HOM05D004399 ORTHO05D005303 2.5e-26 121.7 78 76.9
GSVIVG01000552001 Vitis vinifera HOM05D004399 ORTHO05D005303 2.5e-26 121.7 78 78.2
Glyma.07G066700 Glycine max HOM05D004399 ORTHO05D005303 3.3e-26 121.3 78 83.3
Aa31LG2G6990 Aethionema arabicum HOM05D004399 ORTHO05D005303 4.3e-26 120.9 77 81.8
CSS0044473 Camellia sinensis var. sinensis HOM05D004399 ORTHO05D005303 4.3e-26 120.9 78 79.5
Potri.008G097100 Populus trichocarpa HOM05D004399 ORTHO05D005303 4.3e-26 120.9 78 79.5
Solyc05g012150.4 Solanum lycopersicum HOM05D004399 ORTHO05D005303 4.3e-26 120.9 78 79.5
TWI75G0511 Tripterygium wilfordii HOM05D004399 ORTHO05D005303 4.3e-26 120.9 78 79.5
vmacro10433 Vaccinium macrocarpon HOM05D004399 ORTHO05D005303 4.3e-26 120.9 78 78.2
CAN.G707.11 Capsicum annuum HOM05D004399 ORTHO05D005303 5.6e-26 120.6 78 78.2
MBI14_g37191_MAGBIO Magnolia biondii HOM05D004399 ORTHO05D005303 5.6e-26 120.6 78 78.2
Sabra08G0073300 Salix brachista HOM05D004399 ORTHO05D005303 5.6e-26 120.6 75 82.7
SalBow4G1206 Salvia bowleyana HOM05D004399 ORTHO05D005303 5.6e-26 120.6 78 79.5
HanXRQChr08g0211681 Helianthus annuus HOM05D004399 ORTHO05D005303 7.3e-26 120.2 78 75.6
PGR083G0959 Punica granatum HOM05D004399 ORTHO05D005303 7.3e-26 120.2 78 78.2
Aqoxy3G03260 Aquilegia oxysepala HOM05D004399 ORTHO05D005303 9.6e-26 119.8 77 77.9
AUR62003087 Chenopodium quinoa HOM05D004399 ORTHO05D005303 1.2e-25 119.4 78 78.2
Lalb_Chr17g0341271 Lupinus albus HOM05D004399 ORTHO05D005303 1.2e-25 119.4 70 88.6
Medtr4g094998 Medicago truncatula HOM05D004399 ORTHO05D005303 1.2e-25 119.4 78 79.5
Prupe.1G288800 Prunus persica HOM05D004399 ORTHO05D005303 1.6e-25 119.0 78 78.2
Sopen05g006940 Solanum pennellii HOM05D004399 ORTHO05D005303 1.6e-25 119.0 78 78.2
Ciclev10032681m.g Citrus clementina HOM05D004399 ORTHO05D005303 2.1e-25 118.6 78 78.2
Peaxi162Scf00175g00428 Petunia axillaris HOM05D004399 ORTHO05D005303 2.1e-25 118.6 78 78.2
CANSAT11G0637 Cannabis sativa HOM05D004399 ORTHO05D005303 2.8e-25 118.2 78 76.9
Hma1.2p1_0566F.1_g179870 Hydrangea macrophylla HOM05D004399 ORTHO05D005303 2.8e-25 118.2 78 78.2
Duzib251G0565 Durio zibethinus HOM05D004399 ORTHO05D005303 3.6e-25 117.9 78 78.2
MD13G1060600 Malus domestica HOM05D004399 ORTHO05D005303 3.6e-25 117.9 78 75.6
MD13G1061300 Malus domestica HOM05D004399 ORTHO05D005303 3.6e-25 117.9 78 75.6
Eucgr.B03145 Eucalyptus grandis HOM05D004399 ORTHO05D005303 6.2e-25 117.1 78 76.9
Lsat_1_v5_gn_8_46460 Lactuca sativa HOM05D004399 ORTHO05D005303 6.2e-25 117.1 79 75.9
Nn3g17119 Nelumbo nucifera HOM05D004399 ORTHO05D005303 6.2e-25 117.1 78 78.2
QL03p073920 Quercus lobata HOM05D004399 ORTHO05D005303 6.2e-25 117.1 78 78.2
Potri.010G157500 Populus trichocarpa HOM05D004399 ORTHO05D005303 8.1e-25 116.7 78 78.2
CsaV3_6G033760 Cucumis sativus L. HOM05D004399 ORTHO05D005303 1.1e-24 116.3 78 76.9
Nn4g24779 Nelumbo nucifera HOM05D004399 ORTHO05D005303 1.1e-24 116.3 78 78.2
MELO3C011412.2 Cucumis melo HOM05D004399 ORTHO05D005303 1.4e-24 115.9 78 76.9
Aqoxy4G03091 Aquilegia oxysepala HOM05D004399 ORTHO05D005303 1.8e-24 115.5 72 81.9
CANSAT64G2641 Cannabis sativa HOM05D004399 ORTHO05D005303 1.8e-24 115.5 78 76.9
ClCG08G010510 Citrullus lanatus HOM05D004399 ORTHO05D005303 1.8e-24 115.5 78 76.9
DCAR_026680 Daucus carota HOM05D004399 ORTHO05D005303 1.8e-24 115.5 78 76.9
AUR62007904 Chenopodium quinoa HOM05D004399 ORTHO05D005303 2.4e-24 115.2 78 75.6
PSO478G0010 Papaver somniferum HOM05D004399 ORTHO05D005303 3.1e-24 114.8 78 75.6
Sp2g14510 Schrenkiella parvula HOM05D004399 ORTHO05D005303 3.1e-24 114.8 77 77.9
THA.LOC104805201 Tarenaya hassleriana HOM05D004399 ORTHO05D005303 3.1e-24 114.8 77 79.2
AL5G13460 Arabidopsis lyrata HOM05D004399 ORTHO05D005303 4.0e-24 114.4 78 75.6
Carub.0005s0281 Capsella rubella HOM05D004399 ORTHO05D005303 4.0e-24 114.4 78 75.6
BcaB07g30287 Brassica carinata HOM05D004399 ORTHO05D005303 5.2e-24 114.0 77 76.6
DCAR_024127 Daucus carota HOM05D004399 ORTHO05D005303 5.2e-24 114.0 74 79.7
AL5G13480 Arabidopsis lyrata HOM05D004399 ORTHO05D005303 6.9e-24 113.6 78 75.6
Thhalv10004874m.g Eutrema salsugineum HOM05D004399 ORTHO05D005303 6.9e-24 113.6 77 76.6
Thecc.02G328800 Theobroma cacao HOM05D004399 ORTHO05D005303 6.9e-24 113.6 78 76.9
BcaC06g31162 Brassica carinata HOM05D004399 ORTHO05D005303 9.0e-24 113.2 77 76.6
BcaC06g31172 Brassica carinata HOM05D004399 ORTHO05D005303 9.0e-24 113.2 77 76.6
A06p42990 Brassica napus HOM05D004399 ORTHO05D005303 9.0e-24 113.2 77 76.6
C07p34040 Brassica napus HOM05D004399 ORTHO05D005303 9.0e-24 113.2 77 76.6
BolC7t43918H Brassica oleracea HOM05D004399 ORTHO05D005303 9.0e-24 113.2 77 76.6
Gorai.005G145900 Gossypium raimondii HOM05D004399 ORTHO05D005303 9.0e-24 113.2 65 86.2
AT2G03690 Arabidopsis thaliana HOM05D004399 ORTHO05D005303 1.2e-23 112.8 78 75.6
Cc06_g15640 Coffea canephora HOM05D004399 ORTHO05D005303 1.2e-23 112.8 78 75.6
Gohir.D02G129900 Gossypium hirsutum HOM05D004399 ORTHO05D005303 1.2e-23 112.8 69 81.2
Rhsim09G0126300 Rhododendron simsii HOM05D004399 ORTHO05D005303 1.2e-23 112.8 91 68.1
MD16G1059800 Malus domestica HOM05D004399 ORTHO05D005303 2.0e-23 112.1 78 71.8
A02p33520 Brassica napus HOM05D004399 ORTHO05D005303 3.4e-23 111.3 77 75.3
Sed0000590 Sechium edule HOM05D004399 ORTHO05D005303 4.4e-23 110.9 75 77.3
Nitab4.5_0007061g0010 Nicotiana tabacum HOM05D004399 ORTHO05D005303 5.8e-23 110.5 78 75.6
Zm00001eb433530 Zea mays HOM05D004399 ORTHO05D005303 5.8e-23 110.5 75 77.3
CARHR146010 Cardamine hirsuta HOM05D004399 ORTHO05D005303 7.6e-23 110.2 78 74.4
Os04g0674200 Oryza sativa ssp. japonica HOM05D004399 ORTHO05D005303 7.6e-23 110.2 77 72.7
Oeu031535.3 Olea europaea HOM05D004399 ORTHO05D005303 9.9e-23 109.8 105 59.0
Sed0002833 Sechium edule HOM05D004399 ORTHO05D005303 9.9e-23 109.8 75 77.3
CDE02G0376 Ceratophyllum demersum HOM05D004399 ORTHO05D005303 1.3e-22 109.4 75 72.0
BcaC03g17230 Brassica carinata HOM05D004399 ORTHO05D005303 1.7e-22 109.0 77 75.3
BolC2t11249H Brassica oleracea HOM05D004399 ORTHO05D005303 1.7e-22 109.0 77 75.3
CDE04G3031 Ceratophyllum demersum HOM05D004399 ORTHO05D005303 2.2e-22 108.6 75 70.7
Os05g0188800 Oryza sativa ssp. japonica HOM05D004399 ORTHO05D005303 3.8e-22 107.8 77 71.4
C02p51640 Brassica napus HOM05D004399 ORTHO05D005303 8.4e-22 106.7 77 74.0
HanXRQChr13g0414251 Helianthus annuus HOM05D004399 ORTHO05D005303 5.4e-21 104.0 79 69.6
Nitab4.5_0000231g0090 Nicotiana tabacum HOM05D004399 ORTHO05D005303 4.6e-20 100.9 98 59.2
SalBow2G2941 Salvia bowleyana HOM05D004399 ORTHO05D005303 4.6e-20 100.9 133 48.9
AagrBONN_evm.TU.Sc2ySwM_368.1886 Anthoceros agrestis HOM05D004399 ORTHO05D005303 1.5e-18 95.9 76 67.1
SEGI_29941 Sequoiadendron giganteum HOM05D004399 ORTHO05D005303 2.5e-18 95.1 75 65.3
Mapoly0124s0026 Marchantia polymorpha HOM05D004399 ORTHO05D005303 3.3e-18 94.7 76 63.2
RcHm_v2.0_Chr7g0182561 Rosa chinensis HOM05D004399 ORTHO05D005303 3.3e-18 94.7 61 80.3
SalBow4G1426 Salvia bowleyana HOM05D000195 ORTHO05D000377 4.3e-18 94.4 61 78.7
TPR.G35682 Trifolium pratense HOM05D004399 ORTHO05D005303 2.8e-17 91.7 64 75.0
vmacro20929 Vaccinium macrocarpon HOM05D004399 ORTHO05D005303 2.8e-17 91.7 64 75.0
ATR1120G192 Amborella trichopoda HOM05D004399 ORTHO05D005303 8.1e-17 90.1 61 77.0
AUR62019674 Chenopodium quinoa HOM05D004399 ORTHO05D005303 1.4e-16 89.4 85 57.6
Pp3c2_220 Physcomitrium patens HOM05D004399 ORTHO05D005303 5.3e-16 87.4 70 61.4
SMO196G0238 Selaginella moellendorffii HOM05D004399 ORTHO05D005303 4.5e-15 84.3 76 57.9
Glyma.07G066400 Glycine max HOM05D004399 ORTHO05D005303 1.9e-13 79.0 54 79.6
CBR_g38753 Chara braunii HOM05D004399 ORTHO05D001303 3.5e-12 74.7 74 51.4
PRCOL_00001738 Prasinoderma coloniale HOM05D004399 ORTHO05D005303 1.3e-11 72.8 66 57.6
SEGI_28424 Sequoiadendron giganteum HOM05D004399 ORTHO05D005303 2.1e-09 65.5 49 69.4
Cre03.g154850 Chlamydomonas reinhardtii HOM05D004399 ORTHO05D005303 5.8e-07 57.4 63 52.4
DCAR_028902 Daucus carota HOM05D004399 ORTHO05D175529 5.8e-07 57.4 43 72.1
SalBow4G0663 Salvia bowleyana HOM05D000195 ORTHO05D000377 1.7e-06 55.8 35 71.4


User provided reference genes

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