Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 7.6e-100 367.1 174 100.0
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 3.0e-88 328.6 169 92.3
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 7.9e-81 303.9 169 85.8
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 9.0e-69 263.8 169 75.1
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 2.2e-67 259.2 171 72.5
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 5.1e-64 248.1 171 70.8
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 3.8e-59 231.9 173 63.6
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 9.4e-58 227.3 119 84.9
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 2.1e-57 226.1 150 66.7
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 3.6e-57 225.3 170 63.5
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 3.6e-57 225.3 156 67.3
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 8.8e-56 220.7 158 63.9
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.5e-55 219.9 158 63.3
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.5e-55 219.9 158 63.9
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 2.0e-55 219.5 139 68.3
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 2.0e-55 219.5 172 62.2
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 2.6e-55 219.2 175 56.0
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 4.4e-55 218.4 152 65.1
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 2.2e-54 216.1 157 61.8
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 2.8e-54 215.7 161 60.9
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 3.7e-54 215.3 163 60.1
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 3.7e-54 215.3 174 55.2
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 4.8e-54 214.9 151 64.2
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 1.1e-53 213.8 169 54.4
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 1.1e-53 213.8 129 68.2
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 1.4e-53 213.4 165 59.4
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 1.8e-53 213.0 158 60.1
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 1.8e-53 213.0 157 59.9
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 3.1e-53 212.2 138 65.2
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 4.1e-53 211.8 154 61.7
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 6.9e-53 211.1 163 57.7
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 6.9e-53 211.1 132 68.9
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 6.9e-53 211.1 145 70.3
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 9.1e-53 210.7 176 54.0
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 1.2e-52 210.3 157 62.4
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 1.2e-52 210.3 143 62.9
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 2.6e-52 209.1 138 63.8
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 3.4e-52 208.8 177 57.6
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 3.4e-52 208.8 175 56.6
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 5.9e-52 208.0 154 59.7
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 1.3e-51 206.8 154 60.4
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 1.7e-51 206.5 176 57.4
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 2.2e-51 206.1 159 60.4
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 2.2e-51 206.1 168 59.5
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 2.9e-51 205.7 184 50.5
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 3.8e-51 205.3 169 59.2
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 3.8e-51 205.3 131 68.7
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 5.0e-51 204.9 173 57.2
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 6.5e-51 204.5 118 72.9
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 8.5e-51 204.1 129 69.0
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 8.5e-51 204.1 174 56.9
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 8.5e-51 204.1 155 59.4
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 1.1e-50 203.8 175 57.1
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 1.1e-50 203.8 152 63.2
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.1e-50 203.8 185 53.0
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 1.1e-50 203.8 158 60.1
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 1.9e-50 203.0 176 56.8
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 2.5e-50 202.6 141 63.8
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 3.2e-50 202.2 152 62.5
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 4.2e-50 201.8 158 58.2
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 4.2e-50 201.8 175 56.0
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 5.5e-50 201.4 168 58.9
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 7.2e-50 201.1 165 55.2
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 9.4e-50 200.7 174 55.2
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 9.4e-50 200.7 156 57.7
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 9.4e-50 200.7 156 57.7
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 1.2e-49 200.3 169 56.8
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 1.6e-49 199.9 172 57.0
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 2.7e-49 199.1 152 60.5
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 8.0e-49 197.6 175 55.4
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 8.0e-49 197.6 177 52.0
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 2.3e-48 196.1 175 54.3
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 3.0e-48 195.7 174 54.0
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 5.2e-48 194.9 172 55.2
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 1.5e-47 193.4 178 54.5
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 4.4e-47 191.8 131 61.1
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 1.4e-45 186.8 129 64.3
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 2.0e-44 183.0 140 60.7
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 8.5e-43 177.6 143 53.8
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 2.1e-41 172.9 148 54.1
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 4.7e-41 171.8 116 60.3
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 2.3e-40 169.5 116 60.3
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 2.3e-40 169.5 124 58.9
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 5.2e-40 168.3 145 53.8
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 4.4e-39 165.2 125 59.2
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 1.4e-37 160.2 161 49.7
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 1.4e-37 160.2 167 50.3
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 2.4e-37 159.5 193 43.5
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 4.1e-37 158.7 173 45.1
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 5.3e-37 158.3 90 77.8
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 4.5e-36 155.2 161 48.4
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 2.2e-35 152.9 174 46.6
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 3.8e-35 152.1 167 49.1
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 3.7e-30 135.6 171 42.1
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 5.4e-29 131.7 108 57.4
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.8e-24 116.7 87 54.0
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 1.4e-16 90.5 88 48.9
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 5.8e-15 85.1 86 50.0
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 5.8e-15 85.1 59 61.0
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 7.5e-15 84.7 56 69.6
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 5.4e-13 78.6 130 33.8


User provided reference genes

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