Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.5e-33 144.8 72 100.0
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.5e-30 134.0 72 90.3
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.5e-30 134.0 72 90.3
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 1.0e-29 132.9 72 88.9
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 1.3e-29 132.5 72 87.5
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 1.3e-29 132.5 72 87.5
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 2.9e-29 131.3 72 86.1
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 6.5e-29 130.2 72 86.1
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 1.4e-28 129.0 72 87.5
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 2.5e-28 128.3 72 87.5
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 6.0e-27 123.6 69 84.1
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 1.0e-26 122.9 69 84.1
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 1.3e-26 122.5 72 80.6
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 1.8e-26 122.1 69 81.2
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 2.3e-26 121.7 72 80.6
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 80.6
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 80.6
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 3.9e-26 120.9 85 74.1
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 3.9e-26 120.9 72 80.6
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 5.1e-26 120.6 72 80.6
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 5.1e-26 120.6 72 80.6
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 81.9
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 79.2
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 79.2
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 6.7e-26 120.2 68 82.4
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 79.2
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 79.2
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 80.6
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 79.2
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.1e-25 119.4 72 81.9
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 1.1e-25 119.4 72 80.6
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 1.5e-25 119.0 71 84.5
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 76.4
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 79.2
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 81.9
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 81.9
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 81.9
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 81.9
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.5e-25 119.0 71 74.6
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 81.9
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 76.4
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 81.9
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 2.5e-25 118.2 70 82.9
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 3.3e-25 117.9 72 80.6
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 3.3e-25 117.9 72 76.4
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 3.3e-25 117.9 72 76.4
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 5.7e-25 117.1 69 78.3
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 7.4e-25 116.7 71 81.7
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 76.4
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 1.6e-24 115.5 71 74.6
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 2.1e-24 115.2 69 76.8
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 3.7e-24 114.4 72 80.6
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 3.7e-24 114.4 72 83.3
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 4.8e-24 114.0 72 73.6
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 4.8e-24 114.0 72 75.0
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 6.2e-24 113.6 68 79.4
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 6.2e-24 113.6 68 79.4
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 6.2e-24 113.6 68 75.0
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 8.2e-24 113.2 72 72.2
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 1.1e-23 112.8 68 77.9
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 1.1e-23 112.8 68 77.9
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 1.1e-23 112.8 68 77.9
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.1e-23 112.8 69 73.9
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.1e-23 112.8 68 77.9
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 3.1e-23 111.3 68 76.5
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 6.9e-23 110.2 72 75.0
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 6.9e-23 110.2 131 50.4
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.5e-22 109.0 70 72.9
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 1.5e-22 109.0 67 71.6
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 1.5e-22 109.0 75 73.3
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 2.6e-22 108.2 69 76.8
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 3.4e-22 107.8 67 74.6
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 3.4e-22 107.8 82 65.9
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 4.5e-22 107.5 68 72.1
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 4.5e-22 107.5 72 72.2
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 7.6e-22 106.7 68 72.1
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 1.3e-21 105.9 79 67.1
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 1.7e-21 105.5 70 70.0
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 2.2e-21 105.1 71 71.8
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 5.0e-21 104.0 65 73.8
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 5.0e-21 104.0 72 68.1
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 8.4e-21 103.2 69 69.6
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 2.5e-20 101.7 72 69.4
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 9.3e-20 99.8 101 56.4
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 2.7e-19 98.2 59 76.3
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.5e-17 91.7 137 41.6
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 3.3e-17 91.3 67 65.7
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 3.3e-17 91.3 72 66.7
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 7.4e-17 90.1 65 63.1
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 3.7e-16 87.8 52 80.8
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 6.3e-16 87.0 69 65.2
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 8.2e-16 86.7 51 78.4
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 4.1e-15 84.3 50 82.0
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 5.0e-13 77.4 42 85.7
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 2.5e-12 75.1 68 58.8
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 5.5e-12 73.9 166 33.1
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.6e-11 71.2 42 81.0
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 3.6e-11 71.2 42 78.6
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 4.6e-11 70.9 40 80.0
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 7.9e-11 70.1 39 82.1
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 1.8e-10 68.9 52 63.5
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 3.0e-10 68.2 42 73.8
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 8.8e-10 66.6 41 75.6
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 8.8e-10 66.6 60 55.0
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 3.3e-09 64.7 42 76.2
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 9.7e-09 63.2 35 77.1
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 1.3e-08 62.8 42 71.4
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 8.2e-08 60.1 41 70.7
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 1.8e-07 58.9 36 75.0
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.8e-07 58.9 35 74.3
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 6.9e-07 57.0 31 80.6
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 1.2e-06 56.2 40 60.0
MELO3C035183.2 Cucumis melo HOM05D006941 ORTHO05D008361 2.6e-06 55.1 30 83.3
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 2.6e-06 55.1 45 55.6
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 7.7e-06 53.5 37 59.5


User provided reference genes

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