Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 1.0e-125 453.4 225 100.0
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 4.7e-110 401.4 225 89.8
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 1.1e-90 337.0 182 89.6
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 1.4e-90 336.7 225 75.6
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 4.6e-89 331.6 188 84.0
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 4.6e-89 331.6 188 84.0
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 1.0e-88 330.5 199 81.4
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 2.3e-88 329.3 218 75.2
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 3.1e-85 318.9 186 82.8
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 4.0e-85 318.5 183 84.2
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 5.2e-85 318.2 180 85.0
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 6.8e-85 317.8 182 84.6
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 8.9e-85 317.4 181 85.1
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 2.0e-84 316.2 218 73.4
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 2.6e-84 315.8 199 78.4
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 2.6e-84 315.8 188 81.9
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 3.4e-84 315.5 190 80.5
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 4.4e-84 315.1 209 74.2
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 1.7e-83 313.2 183 83.1
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 2.2e-83 312.8 193 77.7
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 2.9e-83 312.4 209 73.2
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 3.7e-83 312.0 196 77.6
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 3.7e-83 312.0 210 74.8
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 3.7e-83 312.0 223 72.6
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 4.9e-83 311.6 214 72.4
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 6.4e-83 311.2 181 82.9
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 6.4e-83 311.2 181 82.9
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 2.4e-82 309.3 182 81.3
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 5.4e-82 308.1 213 71.8
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 5.4e-82 308.1 226 69.9
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 7.1e-82 307.8 196 78.1
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 9.2e-82 307.4 194 77.8
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 1.2e-81 307.0 203 74.9
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 2.1e-81 306.2 180 82.2
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 3.5e-81 305.4 208 73.1
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 3.5e-81 305.4 189 79.9
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 4.6e-81 305.1 220 71.8
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 1.0e-80 303.9 189 77.8
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 1.0e-80 303.9 176 84.7
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 1.7e-80 303.1 176 84.7
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 1.7e-80 303.1 180 82.2
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 2.3e-80 302.8 176 83.0
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 2.3e-80 302.8 176 82.4
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 5.1e-80 301.6 180 81.7
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 1.1e-79 300.4 241 66.8
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.5e-79 300.1 230 67.8
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 7.3e-79 297.7 224 68.8
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 9.5e-79 297.4 190 75.8
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 9.5e-79 297.4 180 80.0
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 1.6e-78 296.6 227 67.4
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 1.6e-78 296.6 209 71.8
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 1.6e-78 296.6 176 81.2
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 3.6e-78 295.4 222 69.8
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 2.3e-77 292.7 219 68.9
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 4.0e-77 292.0 230 67.0
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 5.2e-77 291.6 174 81.6
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 6.8e-77 291.2 224 69.2
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 6.8e-77 291.2 214 70.1
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 8.9e-77 290.8 221 68.8
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 8.9e-77 290.8 206 73.8
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 1.2e-76 290.4 176 81.2
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 1.2e-76 290.4 221 68.8
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 1.2e-76 290.4 176 80.7
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 1.5e-76 290.0 186 76.9
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 2.0e-76 289.7 155 89.0
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 3.4e-76 288.9 224 68.3
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 4.9e-75 285.0 169 82.8
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 6.4e-75 284.6 176 78.4
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 9.2e-74 280.8 180 77.2
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 6.0e-73 278.1 176 79.0
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 7.8e-73 277.7 217 67.7
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 7.8e-73 277.7 183 73.8
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 3.3e-71 272.3 205 64.9
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 1.6e-70 270.0 152 83.6
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 1.6e-70 270.0 188 71.3
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 2.8e-70 269.2 155 81.9
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 5.2e-69 265.0 188 70.7
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 2.0e-68 263.1 207 67.1
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 2.2e-67 259.6 190 70.0
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 6.4e-67 258.1 181 71.3
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 7.1e-66 254.6 172 70.9
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.2e-65 253.8 235 60.9
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 6.6e-64 248.1 188 68.6
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 4.3e-63 245.4 233 54.9
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 7.3e-63 244.6 189 68.3
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 3.6e-62 242.3 179 68.2
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 3.1e-61 239.2 174 67.2
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 1.3e-59 233.8 123 92.7
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 1.3e-54 217.2 149 74.5
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 2.4e-53 213.0 140 73.6
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.1e-49 199.9 120 79.2
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 9.6e-47 191.0 117 76.1
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 1.5e-44 183.7 169 56.2
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 8.4e-43 177.9 147 63.9
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 3.2e-42 176.0 94 89.4
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 2.8e-38 162.9 95 80.0
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 3.5e-33 146.0 135 58.5
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 3.1e-29 132.9 75 85.3
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.6e-25 120.6 65 86.2
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 2.6e-20 103.2 58 86.2
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 2.3e-08 63.5 60 51.7


User provided reference genes

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