Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G141600 Phaseolus vulgaris HOM05D005304 ORTHO05D004438 4.9e-59 231.1 131 100.0
VMungo0720G0262 Vigna mungo HOM05D005304 ORTHO05D004438 5.2e-53 211.1 139 78.4
Glyma.10G199500 Glycine max HOM05D005304 ORTHO05D004438 9.0e-37 157.1 140 73.6
Glyma.20G190800 Glycine max HOM05D005304 ORTHO05D004438 9.0e-37 157.1 135 67.4
Psat6g173960 Pisum sativum HOM05D005304 ORTHO05D004438 1.2e-36 156.8 142 60.6
Ca_10460_v3 Cicer arietinum L. HOM05D005304 ORTHO05D004438 3.9e-32 141.7 149 54.4
Lj5g0009089 Lotus japonicus HOM05D005304 ORTHO05D004438 5.6e-31 137.9 131 53.4
TPR.G37843 Trifolium pratense HOM05D005304 ORTHO05D004438 3.6e-30 135.2 160 50.0
Medtr1g090837 Medicago truncatula HOM05D005304 ORTHO05D004438 4.0e-29 131.7 142 61.3
Lalb_Chr06g0170051 Lupinus albus HOM05D005304 ORTHO05D004438 1.9e-26 122.9 68 79.4
Lalb_Chr02g0151151 Lupinus albus HOM05D005304 ORTHO05D004438 6.0e-25 117.9 132 53.0
Lalb_Chr03g0036331 Lupinus albus HOM05D005304 ORTHO05D004438 2.8e-22 109.0 131 47.3
Lalb_Chr19g0129331 Lupinus albus HOM05D005304 ORTHO05D004438 4.9e-19 98.2 131 55.7
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 4.2e-18 95.1 132 39.4
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 4.2e-18 95.1 134 39.6
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.0e-16 90.5 133 39.8
COL.COLO4_32872 Corchorus olitorius HOM05D005304 ORTHO05D004438 1.3e-16 90.1 135 37.0
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 5.1e-16 88.2 134 38.8
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 1.5e-15 86.7 71 63.4
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.9e-15 86.3 122 39.3
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 2.5e-15 85.9 135 36.3
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 4.3e-15 85.1 71 62.0
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 4.3e-15 85.1 71 62.0
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 4.3e-15 85.1 71 62.0
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 4.3e-15 85.1 71 62.0
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 4.3e-15 85.1 135 35.6
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 5.7e-15 84.7 134 38.1
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 1.6e-14 83.2 137 36.5
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 2.1e-14 82.8 60 60.0
Thecc.10G090600 Theobroma cacao HOM05D005304 ORTHO05D004438 2.8e-14 82.4 134 37.3
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 3.7e-14 82.0 70 54.3
Atru.chr12.921 Acer truncatum HOM05D005304 ORTHO05D004438 4.8e-14 81.6 86 53.5
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 1.1e-13 80.5 72 58.3
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.4e-13 80.1 124 42.7
Gohir.A01G128800 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.4e-13 80.1 136 39.7
SHI54636 Sapria himalayana HOM05D005304 ORTHO05D004438 2.4e-13 79.3 72 52.8
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 4.1e-13 78.6 56 62.5
Duzib128G0918 Durio zibethinus HOM05D005304 ORTHO05D004438 5.3e-13 78.2 136 36.0
Gohir.D01G118400 Gossypium hirsutum HOM05D005304 ORTHO05D004438 6.9e-13 77.8 136 39.7
Gohir.D04G021300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 6.9e-13 77.8 68 52.9
Gorai.002G144400 Gossypium raimondii HOM05D005304 ORTHO05D004438 6.9e-13 77.8 136 39.7
Gorai.012G025400 Gossypium raimondii HOM05D005304 ORTHO05D004438 6.9e-13 77.8 74 51.4
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 9.0e-13 77.4 123 39.0
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.2e-12 77.0 131 35.1
Gohir.A05G393600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.5e-12 76.6 74 51.4
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 2.0e-12 76.3 122 35.2
PGR044G1405 Punica granatum HOM05D005304 ORTHO05D004438 2.0e-12 76.3 126 36.5
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 2.6e-12 75.9 134 35.1
Ciclev10033091m.g Citrus clementina HOM05D005304 ORTHO05D004438 5.9e-12 74.7 136 37.5
Nitab4.5_0000107g0230 Nicotiana tabacum HOM05D005304 ORTHO05D004438 5.9e-12 74.7 121 36.4
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 1.3e-11 73.6 137 34.3
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.3e-11 73.6 58 62.1
Gohir.A05G290700 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.3e-11 73.6 57 57.9
Gohir.D05G291900 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.3e-11 73.6 57 57.9
Gorai.009G307700 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.7e-11 73.2 72 52.8
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 2.2e-11 72.8 76 47.4
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 2.9e-11 72.4 137 33.6
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 3.8e-11 72.0 122 35.2
PGSC0003DMG400016914 Solanum tuberosum HOM05D005304 ORTHO05D004438 3.8e-11 72.0 122 32.8
Solyc03g071710.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 5.0e-11 71.6 54 57.4
Sopen03g019970 Solanum pennellii HOM05D005304 ORTHO05D004438 5.0e-11 71.6 54 57.4
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 5.0e-11 71.6 129 37.2
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 6.5e-11 71.2 137 33.6
FAN02G4580 Fragaria x ananassa HOM05D005304 ORTHO05D004438 6.5e-11 71.2 60 60.0
FAN12G4274 Fragaria x ananassa HOM05D005304 ORTHO05D004438 6.5e-11 71.2 60 60.0
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 6.5e-11 71.2 122 32.0
CAN.G612.11 Capsicum annuum HOM05D005304 ORTHO05D004438 8.4e-11 70.9 54 55.6
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 1.1e-10 70.5 121 41.3
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 1.9e-10 69.7 119 37.8
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 1.9e-10 69.7 119 33.6
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 3.2e-10 68.9 122 36.1
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 3.2e-10 68.9 130 36.9
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 3.2e-10 68.9 122 34.4
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 5.5e-10 68.2 119 33.6
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 5.5e-10 68.2 137 32.8
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 7.2e-10 67.8 119 34.5
CANSAT56G0274 Cannabis sativa HOM05D005304 ORTHO05D004438 9.3e-10 67.4 59 59.3
Eucgr.J01033 Eucalyptus grandis HOM05D005304 ORTHO05D004438 1.2e-09 67.0 58 55.2
Potri.010G231700 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.6e-09 66.6 55 58.2
MSTRG.27507 Avicennia marina HOM05D005304 ORTHO05D004438 2.1e-09 66.2 52 50.0
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 2.1e-09 66.2 70 48.6
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 2.7e-09 65.9 122 30.3
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 4.6e-09 65.1 59 55.9
PGSC0003DMG400023483 Solanum tuberosum HOM05D005304 ORTHO05D004438 4.6e-09 65.1 77 46.8
ClCG05G021460 Citrullus lanatus HOM05D005304 ORTHO05D004438 6.1e-09 64.7 61 47.5
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 7.9e-09 64.3 78 44.9
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 7.9e-09 64.3 61 49.2
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 7.9e-09 64.3 76 43.4
Nitab4.5_0001163g0010 Nicotiana tabacum HOM05D005304 ORTHO05D004438 1.0e-08 63.9 62 50.0
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 1.3e-08 63.5 130 33.1
Eucgr.J01032 Eucalyptus grandis HOM05D005304 ORTHO05D004438 1.8e-08 63.2 57 54.4
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 2.3e-08 62.8 60 50.0
Lsat_1_v5_gn_9_70641 Lactuca sativa HOM05D005304 ORTHO05D004438 3.0e-08 62.4 124 33.9
CiPaw.14G106000 Carya illinoinensis HOM05D005304 ORTHO05D004438 6.7e-08 61.2 81 40.7
Prupe.6G114400 Prunus persica HOM05D005304 ORTHO05D004438 6.7e-08 61.2 73 45.2
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 8.7e-08 60.8 61 39.3
CsaV3_5G035790 Cucumis sativus L. HOM05D005304 ORTHO05D004438 1.1e-07 60.5 61 44.3
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 1.1e-07 60.5 57 49.1
Potri.009G003400 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.5e-07 60.1 61 47.5
CSS0028161 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 1.9e-07 59.7 59 50.8
Manes.04G012000 Manihot esculenta HOM05D005304 ORTHO05D004438 1.9e-07 59.7 63 46.0
Sabra08G0019700 Salix brachista HOM05D005304 ORTHO05D004438 1.9e-07 59.7 60 48.3
Sopen05g033870 Solanum pennellii HOM05D005304 ORTHO05D004438 1.9e-07 59.7 77 44.2
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 2.5e-07 59.3 58 48.3
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 2.5e-07 59.3 58 50.0
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 2.5e-07 59.3 62 43.5
Sed0009329 Sechium edule HOM05D005304 ORTHO05D004438 2.5e-07 59.3 56 44.6
DCAR_019059 Daucus carota HOM05D005304 ORTHO05D004438 3.3e-07 58.9 74 47.3
Ciclev10033003m.g Citrus clementina HOM05D005304 ORTHO05D004438 4.3e-07 58.5 80 42.5
MELO3C012381.2 Cucumis melo HOM05D005304 ORTHO05D004438 4.3e-07 58.5 61 41.0
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 4.3e-07 58.5 59 44.1
PGR119G0321 Punica granatum HOM05D005304 ORTHO05D004438 9.7e-07 57.4 69 43.5
Thecc.09G296200 Theobroma cacao HOM05D005304 ORTHO05D004438 1.3e-06 57.0 58 48.3
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.6e-06 56.6 59 39.0
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.6e-06 56.6 59 39.0
Gohir.D07G109600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.6e-06 56.6 59 47.5
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.6e-06 56.6 59 39.0
Eucgr.J00398 Eucalyptus grandis HOM05D005304 ORTHO05D004438 2.2e-06 56.2 62 46.8
Sc25g0001350 Simmondsia chinensis HOM05D005304 ORTHO05D004438 2.2e-06 56.2 69 43.5
Atru.chr3.3495 Acer truncatum HOM05D005304 ORTHO05D004438 3.7e-06 55.5 64 46.9
Gohir.A07G105600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 3.7e-06 55.5 57 47.4
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 4.8e-06 55.1 65 47.7
Ciclev10029845m.g Citrus clementina HOM05D005304 ORTHO05D004438 6.3e-06 54.7 58 44.8
Migut.F01894 Erythranthe guttata HOM05D005304 ORTHO05D004438 6.3e-06 54.7 75 40.0
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 6.3e-06 54.7 50 48.0


User provided reference genes

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