Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 4.6e-238 827.4 395 100.0
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 8.2e-219 763.5 397 91.4
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 2.8e-206 721.8 395 86.6
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 5.2e-197 691.0 394 82.5
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 1.6e-193 679.5 395 80.5
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 2.7e-193 678.7 393 80.2
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 1.0e-192 676.8 395 80.0
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 3.1e-189 665.2 388 80.4
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 1.3e-184 649.8 397 76.1
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 2.5e-183 645.6 397 75.3
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 3.3e-183 645.2 397 74.6
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 1.2e-180 636.7 395 73.9
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 1.5e-180 636.3 397 74.6
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 1.6e-177 626.3 394 72.3
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 2.1e-177 625.9 396 73.0
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 4.6e-177 624.8 392 73.2
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 1.3e-176 623.2 399 73.9
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 1.5e-175 619.8 396 71.7
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 7.3e-175 617.5 402 70.6
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 9.5e-175 617.1 397 71.0
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 2.1e-174 615.9 397 72.3
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 4.7e-174 614.8 400 71.2
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 8.1e-174 614.0 394 71.8
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 1.8e-173 612.8 397 72.0
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 3.1e-173 612.1 397 71.3
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 5.8e-172 607.8 397 71.3
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.3e-171 606.7 400 70.8
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 2.2e-171 605.9 397 71.3
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 3.8e-171 605.1 396 70.7
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 3.8e-171 605.1 403 68.7
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.9e-171 604.7 400 70.5
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.9e-171 604.7 400 70.5
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.4e-171 604.4 400 70.5
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.4e-171 604.4 400 70.5
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.4e-171 604.4 400 70.2
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 8.4e-171 604.0 399 71.2
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 1.1e-170 603.6 402 69.9
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 1.1e-170 603.6 396 69.9
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.9e-170 602.8 400 70.2
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 1.9e-170 602.8 399 70.9
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-170 602.4 400 70.0
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-170 602.4 400 70.0
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.2e-170 602.1 400 70.2
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.2e-170 602.1 400 70.0
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 5.4e-170 601.3 403 69.5
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.2e-170 600.5 400 69.8
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.7e-169 599.0 400 69.8
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 4.6e-169 598.2 395 68.9
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 2.3e-168 595.9 395 69.1
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 8.7e-168 594.0 395 69.4
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 1.9e-167 592.8 400 69.0
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 7.3e-167 590.9 398 69.8
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 1.6e-166 589.7 395 68.1
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 6.2e-166 587.8 402 68.2
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 5.8e-164 581.3 400 67.5
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 5.8e-164 581.3 402 65.2
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 9.9e-164 580.5 394 68.0
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 2.9e-163 578.9 395 67.6
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 6.4e-163 577.8 395 69.1
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 8.4e-163 577.4 394 66.8
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 1.4e-162 576.6 397 67.0
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 4.2e-162 575.1 395 68.4
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 9.3e-162 573.9 394 67.3
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 2.7e-161 572.4 397 66.0
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 1.3e-160 570.1 393 67.2
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 1.7e-160 569.7 398 66.3
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 2.3e-160 569.3 399 67.2
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 3.9e-160 568.5 376 69.1
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 1.5e-159 566.6 352 73.3
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 1.9e-159 566.2 394 66.8
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 3.3e-159 565.5 395 66.8
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 3.3e-159 565.5 398 64.8
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 2.1e-158 562.8 397 65.5
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 2.8e-158 562.4 397 65.5
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 2.8e-158 562.4 364 70.6
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 8.1e-158 560.8 397 65.7
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 1.5e-156 556.6 401 65.6
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 3.8e-155 552.0 398 63.3
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 3.8e-155 552.0 362 68.8
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 3.2e-154 548.9 402 63.4
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 8.7e-152 540.8 348 70.1
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 3.3e-151 538.9 390 64.9
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 3.1e-149 532.3 355 71.0
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 1.2e-148 530.4 398 62.1
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 3.4e-148 528.9 399 63.4
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 9.3e-146 520.8 403 61.8
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 2.7e-145 519.2 347 68.3
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 3.5e-145 518.8 398 61.3
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 1.6e-142 510.0 405 60.0
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 3.8e-139 498.8 403 58.3
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 1.6e-134 483.4 290 79.7
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 1.5e-132 476.9 392 58.9
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 1.7e-131 473.4 331 72.5
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 9.7e-127 457.6 390 56.2
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 8.8e-120 434.5 394 53.8
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 2.1e-113 413.3 347 59.7
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 3.2e-98 362.8 311 55.9
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 1.7e-91 340.5 292 56.8
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 3.1e-85 319.7 207 72.0
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 1.4e-80 304.3 426 40.1
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 1.4e-77 294.3 429 39.2
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 6.6e-67 258.8 444 35.4
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 1.8e-64 250.8 157 72.0
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 4.0e-64 249.6 391 38.9
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 6.0e-60 235.7 296 42.9
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 4.3e-42 176.4 366 31.7
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 2.4e-37 160.6 118 61.9
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.4e-29 134.8 93 69.9
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 1.6e-28 131.3 290 32.8
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 8.2e-25 119.0 304 30.3
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 2.8e-17 94.0 67 68.7
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 1.9e-13 81.3 59 59.3


User provided reference genes

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