Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 6.3e-185 650.6 321 100.0
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 8.9e-155 550.4 341 82.1
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 8.4e-145 517.3 342 77.2
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 2.4e-144 515.8 319 82.1
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 1.0e-142 510.4 341 76.2
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 5.1e-142 508.1 341 75.7
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 5.1e-142 508.1 338 75.7
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 2.5e-141 505.8 345 74.8
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 3.2e-136 488.8 343 72.9
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 1.1e-131 473.8 334 72.5
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 6.9e-131 471.1 297 80.1
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 6.7e-126 454.5 306 71.9
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 3.4e-122 442.2 291 73.9
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 5.8e-122 441.4 287 74.9
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 2.9e-121 439.1 304 69.4
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 3.8e-121 438.7 321 67.6
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 1.6e-119 433.3 311 68.8
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 3.5e-119 432.2 302 69.9
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 4.6e-119 431.8 314 67.5
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 6.0e-119 431.4 306 69.9
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 1.0e-118 430.6 310 67.1
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 3.0e-118 429.1 304 68.1
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 8.7e-118 427.6 297 69.0
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 1.1e-117 427.2 319 67.1
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 3.3e-117 425.6 299 67.9
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 4.3e-117 425.2 307 66.1
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 4.3e-117 425.2 308 66.2
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 5.6e-117 424.9 322 66.8
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 5.6e-117 424.9 305 67.9
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 5.6e-117 424.9 308 66.2
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 7.4e-117 424.5 289 71.3
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 2.1e-116 422.9 307 66.4
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.8e-116 422.5 298 68.5
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 6.2e-116 421.4 329 64.7
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.1e-115 420.6 334 64.7
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 4.0e-115 418.7 329 63.2
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 5.3e-115 418.3 294 68.0
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 5.3e-115 418.3 318 66.7
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 2.0e-114 416.4 329 63.8
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 6.5e-113 411.4 313 65.5
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 3.2e-112 409.1 311 65.9
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 9.3e-112 407.5 294 68.4
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 2.1e-111 406.4 300 67.3
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 4.6e-111 405.2 312 64.4
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 3.9e-110 402.1 311 65.9
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 8.7e-110 401.0 325 61.2
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 1.1e-109 400.6 290 68.3
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 1.9e-109 399.8 310 63.5
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 7.4e-109 397.9 299 66.6
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 9.7e-109 397.5 323 61.6
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 2.8e-108 396.0 339 59.9
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 6.3e-108 394.8 287 67.9
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 1.1e-107 394.0 324 60.5
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 1.4e-107 393.7 285 68.8
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.1e-107 392.5 393 55.0
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 4.1e-107 392.1 281 68.0
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 4.1e-107 392.1 273 71.1
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 5.3e-107 391.7 339 57.5
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 5.3e-107 391.7 290 66.2
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 6.9e-107 391.3 287 66.2
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 6.9e-107 391.3 290 64.8
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 9.0e-107 391.0 304 64.8
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.2e-106 390.6 340 56.5
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 1.2e-106 390.6 305 62.0
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 3.8e-105 385.6 328 60.4
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 3.8e-105 385.6 290 63.8
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 6.5e-105 384.8 298 62.1
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 1.9e-104 383.3 301 62.5
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 4.2e-104 382.1 328 59.1
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 4.2e-104 382.1 297 64.0
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 5.5e-104 381.7 299 63.2
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 1.8e-102 376.7 287 63.4
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 3.9e-102 375.6 325 57.8
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 5.1e-102 375.2 272 67.3
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 2.0e-101 373.2 326 58.0
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 2.5e-101 372.9 335 57.9
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.3e-100 370.5 304 61.8
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 2.2e-100 369.8 336 56.5
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 2.8e-100 369.4 309 60.5
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 3.9e-94 349.0 272 64.7
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 1.1e-93 347.4 326 57.1
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 2.8e-92 342.8 283 61.1
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.8e-91 340.1 291 62.2
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 2.4e-91 339.7 319 53.9
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 9.1e-91 337.8 267 62.9
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.7e-89 333.6 299 58.9
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 1.4e-88 330.5 289 56.4
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 7.2e-88 328.2 291 55.7
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.0e-86 324.3 316 57.0
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.0e-86 322.8 272 62.1
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 4.8e-84 315.5 217 71.9
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 4.2e-80 302.4 264 55.7
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 5.2e-78 295.4 294 54.1
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 2.2e-73 280.0 213 65.7
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 5.5e-72 275.4 392 40.1
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 8.8e-70 268.1 269 55.4
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.0e-69 266.9 202 62.9
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.3e-60 237.7 269 48.0
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 3.2e-59 233.0 162 69.8
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 3.5e-58 229.6 150 72.7
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 9.8e-53 211.5 157 66.9
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 1.0e-49 201.4 107 89.7
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 9.5e-48 194.9 148 63.5
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 6.8e-46 188.7 142 69.0
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.7e-36 156.4 269 38.7
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 3.7e-36 156.4 101 68.3
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.1e-32 144.8 98 70.4
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.1e-30 136.7 90 75.6
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.1e-30 136.7 90 75.6
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 7.8e-26 122.1 81 67.9
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 5.6e-24 115.9 66 78.8
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.3e-20 104.8 145 44.1
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.9e-20 102.8 79 63.3
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 6.4e-20 102.4 82 61.0
Glyma.10G195100 Glycine max HOM05D006565 ORTHO05D025622 3.2e-19 100.1 79 68.4
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 7.6e-13 79.0 72 55.6
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.6e-13 79.0 80 51.2
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 8.4e-12 75.5 53 66.0
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 1.6e-10 71.2 41 75.6
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 1.8e-09 67.8 81 46.9
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 3.9e-09 66.6 42 73.8
TPR.G13189 Trifolium pratense HOM05D006565 ORTHO05D025622 3.3e-08 63.5 80 48.8
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 2.1e-07 60.8 45 64.4
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.8e-06 57.8 38 71.1


User provided reference genes

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