Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G136700 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 3.8e-105 384.8 187 100.0
arahy.Tifrunner.gnm1.ann1.0IPW5R Arachis hypogaea HOM05D005413 ORTHO05D006536 1.5e-56 223.4 188 66.0
arahy.Tifrunner.gnm1.ann1.BD57S3 Arachis hypogaea HOM05D005413 ORTHO05D006536 3.2e-56 222.2 188 66.0
Lj5g0017620 Lotus japonicus HOM05D005413 ORTHO05D006536 9.8e-53 210.7 186 60.8
TPR.G10267 Trifolium pratense HOM05D005413 ORTHO05D006536 1.5e-48 196.8 192 56.8
Lalb_Chr21g0312751 Lupinus albus HOM05D005413 ORTHO05D006536 8.8e-46 187.6 170 60.0
Medtr1g090350 Medicago truncatula HOM05D005413 ORTHO05D006536 8.8e-46 187.6 189 56.1
Ca_10423_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 6.3e-44 181.4 191 56.0
Dinv04422 Davidia involucrata HOM05D005413 ORTHO05D006536 3.7e-36 155.6 187 50.8
Potri.010G244600 Populus trichocarpa HOM05D005413 ORTHO05D006536 6.4e-36 154.8 182 46.2
Potri.008G001700 Populus trichocarpa HOM05D005413 ORTHO05D006536 1.2e-34 150.6 171 45.6
Sabra10G0191100 Salix brachista HOM05D005413 ORTHO05D006536 1.7e-33 146.7 182 44.5
Potri.008G015500 Populus trichocarpa HOM05D005413 ORTHO05D006536 3.0e-33 146.0 171 44.4
CSS0050484 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 2.8e-31 139.4 188 47.3
TAR633G2414 Trochodendron aralioides HOM05D005413 ORTHO05D006536 1.0e-30 137.5 168 46.4
Cfa010502 Carpinus fangiana HOM05D005413 ORTHO05D006536 2.3e-30 136.3 183 44.3
Dinv03807 Davidia involucrata HOM05D005413 ORTHO05D006536 4.0e-30 135.6 162 48.1
Hund06812 Selenicereus undatus HOM05D005413 ORTHO05D006536 1.5e-29 133.7 185 43.2
Hma1.2p1_0098F.1_g048260 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 2.6e-29 132.9 165 47.3
Sabra08G0009400 Salix brachista HOM05D005413 ORTHO05D006536 4.4e-29 132.1 181 42.0
TAR623G0045 Trochodendron aralioides HOM05D005413 ORTHO05D006536 4.4e-29 132.1 186 44.1
CSS0023574 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 5.8e-29 131.7 179 42.5
Ciclev10028962m.g Citrus clementina HOM05D005413 ORTHO05D006536 1.3e-28 130.6 172 44.2
QL04p048808 Quercus lobata HOM05D005413 ORTHO05D006536 1.7e-28 130.2 216 37.5
AUR62005613 Chenopodium quinoa HOM05D005413 ORTHO05D006536 3.2e-27 125.9 188 42.0
Thecc.10G119400 Theobroma cacao HOM05D005413 ORTHO05D006536 5.4e-27 125.2 176 43.8
Nn2g14375 Nelumbo nucifera HOM05D005413 ORTHO05D006536 7.0e-27 124.8 186 43.5
Haze_03431 Corylus avellana HOM05D005413 ORTHO05D006536 9.2e-27 124.4 136 50.0
vmacro07276 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 1.2e-26 124.0 108 59.3
Oeu033267.1 Olea europaea HOM05D005413 ORTHO05D006536 1.3e-25 120.6 175 44.6
Cc01_g07840 Coffea canephora HOM05D005413 ORTHO05D006536 2.3e-25 119.8 177 39.0
Lj2A950G18 Lonicera japonica HOM05D005413 ORTHO05D006536 2.3e-25 119.8 179 40.8
Rhsim03G0094100 Rhododendron simsii HOM05D005413 ORTHO05D006536 3.9e-25 119.0 126 54.0
GSVIVG01037530001 Vitis vinifera HOM05D005413 ORTHO05D006536 3.9e-25 119.0 176 38.6
Hma1.2p1_0101F.1_g049660 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 5.0e-25 118.6 169 41.4
AUR62024117 Chenopodium quinoa HOM05D005413 ORTHO05D006536 1.5e-24 117.1 188 39.4
Dinv18856 Davidia involucrata HOM05D005413 ORTHO05D006536 1.5e-24 117.1 176 38.6
Actinidia37056 Actinidia chinensis HOM05D005413 ORTHO05D006536 4.3e-24 115.5 176 39.2
Haze_03425 Corylus avellana HOM05D005413 ORTHO05D006536 4.3e-24 115.5 169 40.2
PGSC0003DMG400002998 Solanum tuberosum HOM05D005413 ORTHO05D006536 9.5e-24 114.4 180 40.6
TWI79G1192 Tripterygium wilfordii HOM05D005413 ORTHO05D006536 9.5e-24 114.4 176 39.8
Peaxi162Scf00429g00512 Petunia axillaris HOM05D005413 ORTHO05D006536 1.2e-23 114.0 171 41.5
Ah.03g136210 Amaranthus hybridus HOM05D005413 ORTHO05D006536 1.6e-23 113.6 185 38.4
ECA238G0598 Erigeron canadensis HOM05D005413 ORTHO05D006536 2.1e-23 113.2 188 36.7
RcHm_v2.0_Chr5g0049091 Rosa chinensis HOM05D005413 ORTHO05D006536 2.8e-23 112.8 177 38.4
Gohir.A05G077100 Gossypium hirsutum HOM05D005413 ORTHO05D006536 3.6e-23 112.5 196 36.2
EL10Ac6g13493 Beta vulgaris HOM05D005413 ORTHO05D006536 4.7e-23 112.1 185 36.8
Thecc.09G267600 Theobroma cacao HOM05D005413 ORTHO05D006536 6.2e-23 111.7 191 38.2
Gohir.D05G079900 Gossypium hirsutum HOM05D005413 ORTHO05D006536 8.1e-23 111.3 196 36.7
Gorai.009G081500 Gossypium raimondii HOM05D005413 ORTHO05D006536 8.1e-23 111.3 196 36.7
MBI15_g31416_MAGBIO Magnolia biondii HOM05D005413 ORTHO05D006536 8.1e-23 111.3 186 40.9
Sopen11g029620 Solanum pennellii HOM05D005413 ORTHO05D006536 1.1e-22 110.9 179 39.7
CiPaw.14G092700 Carya illinoinensis HOM05D005413 ORTHO05D006536 1.4e-22 110.5 188 38.8
Solyc11g071950.3 Solanum lycopersicum HOM05D005413 ORTHO05D006536 1.8e-22 110.2 179 39.1
FvH4_3g26150 Fragaria vesca HOM05D005413 ORTHO05D006536 2.3e-22 109.8 188 37.2
FAN11G2501 Fragaria x ananassa HOM05D005413 ORTHO05D006536 2.3e-22 109.8 188 37.2
Lsat_1_v5_gn_2_106300 Lactuca sativa HOM05D005413 ORTHO05D006536 2.3e-22 109.8 187 41.7
Lj2C36T10 Lonicera japonica HOM05D005413 ORTHO05D006536 3.1e-22 109.4 197 37.1
Actinidia11676 Actinidia chinensis HOM05D005413 ORTHO05D006536 1.2e-21 107.5 176 38.6
Duzib170G0305 Durio zibethinus HOM05D005413 ORTHO05D006536 1.5e-21 107.1 194 35.6
MSTRG.12398 Avicennia marina HOM05D005413 ORTHO05D006536 4.4e-21 105.5 172 38.4
Lalb_Chr19g0136161 Lupinus albus HOM05D005413 ORTHO05D006536 5.8e-21 105.1 170 38.2
Nitab4.5_0000158g0110 Nicotiana tabacum HOM05D005413 ORTHO05D006536 7.5e-21 104.8 184 34.8
Sc09g0004800 Simmondsia chinensis HOM05D005413 ORTHO05D006536 7.5e-21 104.8 176 36.9
Duzib168G1403 Durio zibethinus HOM05D005413 ORTHO05D006536 9.8e-21 104.4 195 34.9
FAN16G0400 Fragaria x ananassa HOM05D005413 ORTHO05D006536 9.8e-21 104.4 187 35.8
FAN16G2334 Fragaria x ananassa HOM05D005413 ORTHO05D006536 9.8e-21 104.4 187 35.8
Nitab4.5_0008364g0010 Nicotiana tabacum HOM05D005413 ORTHO05D006536 9.8e-21 104.4 185 36.2
SGA_v2.0_scaffold22G09835 Striga asiatica HOM05D005413 ORTHO05D006536 9.8e-21 104.4 171 40.4
ATR1120G017 Amborella trichopoda HOM05D005413 ORTHO05D006536 1.3e-20 104.0 177 37.9
COL.COLO4_00160 Corchorus olitorius HOM05D005413 ORTHO05D006536 1.7e-20 103.6 194 36.1
Eucgr.J00585 Eucalyptus grandis HOM05D005413 ORTHO05D006536 1.7e-20 103.6 177 39.0
QL01p019216 Quercus lobata HOM05D005413 ORTHO05D006536 1.7e-20 103.6 176 36.9
FAN25G1874 Fragaria x ananassa HOM05D005413 ORTHO05D006536 2.2e-20 103.2 170 37.1
VMungo1127G2102 Vigna mungo HOM05D005413 ORTHO05D006536 2.2e-20 103.2 175 36.0
Zm00001eb012330 Zea mays HOM05D005413 ORTHO05D006536 2.2e-20 103.2 181 36.5
HanXRQChr05g0137071 Helianthus annuus HOM05D005413 ORTHO05D006536 3.7e-20 102.4 108 44.4
Oeu031446.2 Olea europaea HOM05D005413 ORTHO05D006536 3.7e-20 102.4 172 36.6
Lj3g0006130 Lotus japonicus HOM05D005413 ORTHO05D006536 4.9e-20 102.1 186 35.5
Phvul.011G100200 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 6.4e-20 101.7 180 35.6
unitig_899.g15382 Utricularia gibba HOM05D005413 ORTHO05D006536 1.1e-19 100.9 172 36.6
Migut.D02382 Erythranthe guttata HOM05D005413 ORTHO05D006536 1.9e-19 100.1 171 36.8
PSO339G2181 Papaver somniferum HOM05D005413 ORTHO05D006536 3.2e-19 99.4 207 34.3
SEGI_03865 Sequoiadendron giganteum HOM05D005413 ORTHO05D006536 4.1e-19 99.0 187 38.0
CDE04G1023 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 7.1e-19 98.2 190 36.8
Thhalv10014324m.g Eutrema salsugineum HOM05D005413 ORTHO05D006536 7.1e-19 98.2 182 35.2
PSO384G0849 Papaver somniferum HOM05D005413 ORTHO05D006536 7.1e-19 98.2 105 49.5
TPR.G4599 Trifolium pratense HOM05D005413 ORTHO05D006536 9.2e-19 97.8 169 34.3
Manes.11G103700 Manihot esculenta HOM05D005413 ORTHO05D006536 1.2e-18 97.4 172 37.8
arahy.Tifrunner.gnm1.ann1.K4CWT5 Arachis hypogaea HOM05D005413 ORTHO05D006536 3.5e-18 95.9 188 35.1
HPP92_015644 Vanilla planifolia HOM05D005413 ORTHO05D006536 3.5e-18 95.9 110 47.3
Atru.chr3.3078 Acer truncatum HOM05D005413 ORTHO05D006536 4.6e-18 95.5 185 33.5
Atru.chr3.3087 Acer truncatum HOM05D005413 ORTHO05D006536 4.6e-18 95.5 185 33.5
arahy.Tifrunner.gnm1.ann1.C0JSMI Arachis hypogaea HOM05D005413 ORTHO05D006536 4.6e-18 95.5 188 35.1
Aqoxy1G00612 Aquilegia oxysepala HOM05D005413 ORTHO05D006536 7.8e-18 94.7 181 34.3
CsaV3_6G038630 Cucumis sativus L. HOM05D005413 ORTHO05D006536 1.0e-17 94.4 180 36.7
Os03g0274700 Oryza sativa ssp. japonica HOM05D005413 ORTHO05D006536 1.0e-17 94.4 201 37.8
MD11G1174800 Malus domestica HOM05D005413 ORTHO05D006536 1.3e-17 94.0 188 34.6
Prupe.6G147200 Prunus persica HOM05D005413 ORTHO05D006536 1.3e-17 94.0 176 34.7
Medtr4g050330 Medicago truncatula HOM05D005413 ORTHO05D006536 1.7e-17 93.6 179 32.4
PGR119G0748 Punica granatum HOM05D005413 ORTHO05D006536 3.0e-17 92.8 172 35.5
DCAR_012252 Daucus carota HOM05D005413 ORTHO05D006536 3.9e-17 92.4 107 45.8
Glyma.12G095900 Glycine max HOM05D005413 ORTHO05D006536 3.9e-17 92.4 170 34.7
Sp6g23150 Schrenkiella parvula HOM05D005413 ORTHO05D006536 3.9e-17 92.4 201 33.3
vmacro14313 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 3.9e-17 92.4 240 30.4
MELO3C014525.2 Cucumis melo HOM05D005413 ORTHO05D006536 5.1e-17 92.0 172 37.8
ClCG02G022490 Citrullus lanatus HOM05D005413 ORTHO05D006536 6.6e-17 91.7 175 37.1
CDE07G0886 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 1.1e-16 90.9 90 53.3
BcaC01g06609 Brassica carinata HOM05D005413 ORTHO05D006536 1.5e-16 90.5 190 34.2
BolC3t13687H Brassica oleracea HOM05D005413 ORTHO05D006536 1.5e-16 90.5 190 34.2
Ca_19483_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 1.9e-16 90.1 180 31.1
Sed0018758 Sechium edule HOM05D005413 ORTHO05D006536 1.9e-16 90.1 165 33.9
C03p12140 Brassica napus HOM05D005413 ORTHO05D006536 2.5e-16 89.7 190 34.7
BraA03t10367Z Brassica rapa HOM05D005413 ORTHO05D006536 9.5e-16 87.8 190 33.7
DCAR_018207 Daucus carota HOM05D005413 ORTHO05D006536 4.7e-15 85.5 176 34.7
CARHR191490 Cardamine hirsuta HOM05D005413 ORTHO05D006536 1.1e-14 84.3 152 34.9
A03p10550 Brassica napus HOM05D005413 ORTHO05D006536 1.8e-14 83.6 182 33.5
Glyma.11G171773 Glycine max HOM05D005413 ORTHO05D006536 5.2e-14 82.0 191 29.8
Lalb_Chr03g0028501 Lupinus albus HOM05D005413 ORTHO05D006536 6.8e-14 81.6 180 31.1
MD03G1159500 Malus domestica HOM05D005413 ORTHO05D006536 6.8e-14 81.6 185 31.9
SalBow6G6902 Salvia bowleyana HOM05D005413 ORTHO05D006536 1.5e-13 80.5 92 44.6
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 1.5e-13 80.5 85 44.7
Psat7g200680 Pisum sativum HOM05D005413 ORTHO05D006536 9.9e-13 77.8 183 31.7
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 6.4e-12 75.1 93 40.9
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 1.1e-11 74.3 91 46.2
PGR044G1324 Punica granatum HOM05D003044 ORTHO05D001869 5.4e-11 72.0 68 51.5
Aa31LG1G13390 Aethionema arabicum HOM05D005413 ORTHO05D006536 9.2e-11 71.2 176 29.5
BcaB01g04747 Brassica carinata HOM05D005413 ORTHO05D006536 3.0e-09 66.2 180 32.2
Dinv33562 Davidia involucrata HOM05D005413 ORTHO05D006536 3.0e-09 66.2 58 48.3
FAN21G0466 Fragaria x ananassa HOM05D005413 ORTHO05D006536 3.0e-09 66.2 188 28.7
Rhsim01G0199600 Rhododendron simsii HOM05D005413 ORTHO05D006536 3.0e-09 66.2 301 23.9
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 5.1e-09 65.5 108 34.3
Cpa.g.sc33.125 Carica papaya HOM05D005413 ORTHO05D006536 1.1e-08 64.3 62 51.6
Oeu029208.1 Olea europaea HOM05D005413 ORTHO05D006536 1.1e-08 64.3 50 54.0
AL6G33000 Arabidopsis lyrata HOM05D005413 ORTHO05D006536 1.9e-08 63.5 74 41.9
THA.LOC104810942 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 4.3e-08 62.4 75 40.0
Rhsim01G0199900 Rhododendron simsii HOM05D005413 ORTHO05D006536 5.6e-08 62.0 123 35.8
Carub.0006s1968 Capsella rubella HOM05D005413 ORTHO05D006536 7.3e-08 61.6 58 46.6
THA.LOC104815083 Tarenaya hassleriana HOM05D005413 ORTHO05D006536 1.2e-07 60.8 193 28.0
AT5G22040 Arabidopsis thaliana HOM05D005413 ORTHO05D006536 1.6e-07 60.5 73 42.5
BcaB05g22753 Brassica carinata HOM05D005413 ORTHO05D006536 3.6e-07 59.3 55 50.9


User provided reference genes

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