Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 2.9e-284 981.1 459 100.0
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 8.2e-279 963.0 459 97.4
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 9.4e-275 949.5 459 96.1
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 2.7e-269 931.4 459 93.0
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 1.3e-268 929.1 459 92.6
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 1.2e-266 922.5 459 93.7
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 4.4e-264 914.1 459 92.2
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 3.1e-262 907.9 459 91.5
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 2.8e-258 894.8 459 90.0
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 3.6e-258 894.4 459 90.6
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 8.0e-258 893.3 459 90.4
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.8e-257 892.1 459 89.8
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 6.8e-257 890.2 459 89.1
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 5.7e-256 887.1 461 89.6
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 2.2e-255 885.2 460 89.8
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 3.7e-255 884.4 460 89.6
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.4e-254 882.5 475 86.3
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 2.4e-254 881.7 459 89.5
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 7.0e-254 880.2 461 89.4
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.0e-254 880.2 459 89.1
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 9.2e-254 879.8 459 87.1
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 9.2e-254 879.8 459 88.5
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 2.7e-253 878.2 461 89.2
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 2.7e-253 878.2 459 87.6
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 3.5e-253 877.9 460 88.3
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 3.5e-253 877.9 459 88.0
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 5.9e-253 877.1 459 89.3
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.0e-252 876.3 461 89.2
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.0e-252 876.3 459 88.9
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 2.3e-252 875.2 460 88.0
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 8.6e-252 873.2 459 88.5
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 8.6e-252 873.2 460 88.3
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 3.3e-251 871.3 461 88.3
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.4e-249 865.9 459 86.1
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 4.0e-249 864.4 459 86.3
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 5.2e-249 864.0 461 87.6
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 3.4e-248 861.3 460 86.7
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 3.4e-248 861.3 460 86.7
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 9.8e-248 859.8 460 85.4
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 1.3e-247 859.4 460 86.1
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 8.3e-247 856.7 459 88.0
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 7.0e-246 853.6 497 81.7
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 3.5e-245 851.3 481 83.6
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 5.0e-244 847.4 460 83.9
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 6.6e-244 847.0 459 86.5
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 1.1e-243 846.3 460 84.6
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 4.3e-243 844.3 459 83.2
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 7.3e-243 843.6 459 83.0
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 2.8e-242 841.6 459 82.8
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 2.8e-242 841.6 459 82.8
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 4.7e-242 840.9 460 82.6
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 6.2e-242 840.5 460 83.0
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 8.9e-241 836.6 460 82.8
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 2.0e-240 835.5 461 83.7
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.3e-239 832.8 460 82.8
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.9e-238 828.9 459 84.7
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 9.2e-238 826.6 459 81.7
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 9.2e-238 826.6 461 82.9
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 3.5e-237 824.7 459 81.5
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 3.5e-237 824.7 459 81.7
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 4.6e-237 824.3 460 82.2
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 7.8e-237 823.5 462 81.0
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.3e-236 822.8 459 81.3
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 3.0e-236 821.6 458 81.9
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 6.6e-236 820.5 459 82.4
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 4.3e-235 817.8 455 82.2
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 2.8e-234 815.1 459 80.8
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 2.8e-234 815.1 459 83.4
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 8.1e-234 813.5 460 80.9
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 8.9e-233 810.1 443 83.1
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 1.2e-232 809.7 459 80.4
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 3.7e-231 804.7 460 80.0
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 1.9e-230 802.4 486 76.1
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 2.7e-229 798.5 460 80.7
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 7.8e-229 797.0 459 81.7
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 1.3e-228 796.2 460 80.7
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.5e-227 792.7 458 78.8
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 4.4e-224 781.2 459 77.8
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 5.1e-220 767.7 460 78.9
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 4.8e-218 761.1 459 76.5
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 6.9e-217 757.3 458 74.9
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 4.2e-214 748.0 464 73.9
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.8e-209 732.6 498 70.1
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 2.8e-202 708.8 458 74.9
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.2e-200 703.4 459 71.9
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.1e-195 686.8 341 94.4
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.1e-195 686.8 341 94.4
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 4.1e-193 678.3 393 78.4
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.2e-191 672.5 451 66.5
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 4.2e-190 668.3 454 66.1
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.6e-189 665.2 451 66.5
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 7.4e-187 657.5 340 89.4
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.3e-185 651.4 338 90.2
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.6e-184 649.0 456 64.0
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 9.4e-182 640.6 338 89.3
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.7e-181 639.0 336 88.7
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.0e-180 637.1 336 88.7
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 9.7e-179 630.6 465 61.7
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 3.2e-174 615.5 323 89.5
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.2e-170 602.8 337 83.1
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.4e-169 600.1 338 83.7
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.0e-167 591.7 300 91.0
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.9e-166 589.7 337 81.0
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 3.0e-164 582.4 450 56.7
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.1e-150 537.3 297 83.5
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.2e-150 535.8 290 87.6
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 5.2e-148 528.5 337 74.8
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.7e-146 523.5 297 82.8
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.8e-146 522.7 291 83.2
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 2.3e-140 503.1 277 81.6
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 3.0e-135 486.1 338 64.5
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 5.4e-129 465.3 280 77.5
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 8.1e-109 398.3 449 41.6
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 1.7e-98 364.0 484 38.2
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 6.5e-74 282.3 168 75.6
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.8e-58 229.9 110 94.5
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.8e-58 229.9 110 94.5
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 8.5e-58 228.8 110 93.6
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.8e-53 213.8 185 57.3
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.5e-41 174.9 106 78.3
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 9.2e-12 75.9 40 80.0


User provided reference genes

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