Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G133900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 2.5e-189 665.2 324 100.0
Phvul.005G064000 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 2.7e-82 309.7 266 60.2
Phvul.001G121300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 2.1e-63 246.9 152 77.0
Phvul.007G113900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.3e-57 227.6 276 42.0
Phvul.004G109100 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 4.3e-56 222.6 251 43.8
Phvul.003G122800 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.8e-54 217.2 265 42.6
Phvul.003G065500 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 2.3e-49 200.3 316 38.0
Phvul.009G112900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 5.3e-46 189.1 132 63.6
Phvul.001G132400 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.5e-40 171.0 182 41.8
Phvul.002G118700 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 2.8e-39 166.8 268 37.7
Phvul.005G066300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 6.9e-38 162.2 218 39.0
Phvul.008G175400 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 6.9e-38 162.2 301 35.2
Phvul.004G078300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 4.2e-35 152.9 264 35.6
Phvul.003G077500 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 3.7e-31 139.8 154 42.9
Phvul.007G142300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.7e-28 131.0 268 31.0
Phvul.003G065900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 7.4e-24 115.5 169 35.5
Phvul.001G023000 Phaseolus vulgaris HOM05D009155 ORTHO05D004853 5.9e-21 105.9 268 28.4
VMungo1309G2955 Vigna mungo HOM05D009855 ORTHO05D010135 7.7e-21 105.5 203 34.5
VMungo0647G0850 Vigna mungo HOM05D000410 ORTHO05D007231 1.7e-20 104.4 264 28.8
VMungo0647G1863 Vigna mungo HOM05D009155 ORTHO05D004853 1.7e-20 104.4 203 29.6
VMungo0496G0001 Vigna mungo HOM05D009855 ORTHO05D010135 2.2e-20 104.0 214 32.7
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 2.2e-20 104.0 288 25.3
VMungo0251G1225 Vigna mungo HOM05D000014 ORTHO05D000016 3.8e-20 103.2 206 31.6
TPR.G18967 Trifolium pratense HOM05D008332 ORTHO05D010135 1.4e-19 101.3 205 33.7
VMungo1383G1533 Vigna mungo HOM05D009155 ORTHO05D004853 1.2e-18 98.2 204 29.9
TPR.G30395 Trifolium pratense HOM05D008332 ORTHO05D010135 2.1e-18 97.4 203 29.1
TPR.G38548 Trifolium pratense HOM05D008332 ORTHO05D010135 2.7e-18 97.1 204 31.4
TPR.G22724 Trifolium pratense HOM05D008332 ORTHO05D010135 4.6e-18 96.3 205 31.2
Phvul.003G138486 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.0e-17 95.1 92 42.4
Medtr5g454250 Medicago truncatula HOM05D008332 ORTHO05D010135 8.8e-17 92.0 211 29.9
TPR.G39718 Trifolium pratense HOM05D008332 ORTHO05D010135 1.5e-16 91.3 170 32.4
Medtr6g033460 Medicago truncatula HOM05D008332 ORTHO05D010135 5.7e-16 89.4 206 28.2
TPR.G18935 Trifolium pratense HOM05D008332 ORTHO05D010135 7.4e-16 89.0 203 29.1
VMungo0647G1041 Vigna mungo HOM05D009155 ORTHO05D004853 2.8e-15 87.0 180 28.3
Medtr3g030280 Medicago truncatula HOM05D008332 ORTHO05D010135 2.0e-13 80.9 210 26.7
VMungo0331G1190 Vigna mungo HOM05D009155 ORTHO05D004853 2.6e-13 80.5 210 27.1
TPR.G14040 Trifolium pratense HOM05D008332 ORTHO05D010135 3.4e-13 80.1 149 29.5
Medtr2g083020 Medicago truncatula HOM05D008332 ORTHO05D010135 1.0e-12 78.6 210 26.7
Medtr7g024810 Medicago truncatula HOM05D008332 ORTHO05D010135 1.0e-12 78.6 210 26.7
Medtr2g009940 Medicago truncatula HOM05D008332 ORTHO05D010135 1.7e-12 77.8 210 26.7
Medtr4g027155 Medicago truncatula HOM05D045294 ORTHO05D004853 2.2e-12 77.4 206 28.2
Medtr6g014585 Medicago truncatula HOM05D008332 ORTHO05D010135 2.2e-12 77.4 212 26.9
TPR.G29188 Trifolium pratense HOM05D008332 ORTHO05D010135 3.8e-12 76.6 189 27.5
Medtr6g012930 Medicago truncatula HOM05D008332 ORTHO05D010135 5.0e-12 76.3 210 26.7
TPR.G62 Trifolium pratense HOM05D008332 ORTHO05D010135 5.0e-12 76.3 169 27.8
TPR.G20348 Trifolium pratense HOM05D008332 ORTHO05D010135 8.5e-12 75.5 120 32.5
TPR.G39889 Trifolium pratense HOM05D008332 ORTHO05D010135 3.2e-11 73.6 120 32.5
Lalb_Chr09g0324261 Lupinus albus HOM05D009855 ORTHO05D010135 5.5e-11 72.8 148 35.1
VMungo0720G1205 Vigna mungo HOM05D009855 ORTHO05D010135 9.4e-11 72.0 84 42.9
TPR.G14209 Trifolium pratense HOM05D012339 ORTHO05D004853 3.6e-10 70.1 212 25.5
VMungo0720G2649 Vigna mungo HOM05D009155 ORTHO05D004853 3.6e-10 70.1 168 24.4
VMungo0331G1323 Vigna mungo HOM05D009155 ORTHO05D004853 5.1e-09 66.2 185 24.3
VMungo1215G1710 Vigna mungo HOM05D009155 ORTHO05D004853 1.1e-08 65.1 128 29.7
VMungo0464G1989 Vigna mungo HOM05D009155 ORTHO05D004853 1.5e-08 64.7 129 33.3
Medtr0019s0170 Medicago truncatula HOM05D008332 ORTHO05D010135 2.6e-08 63.9 118 35.6
TPR.G8862 Trifolium pratense HOM05D008332 ORTHO05D010135 4.4e-08 63.2 104 30.8
ClCG02G021720 Citrullus lanatus HOM05D007234 ORTHO05D008488 7.4e-08 62.4 203 26.1
Glyma.09G117500 Glycine max HOM05D005718 ORTHO05D004853 1.3e-07 61.6 208 25.0
TPR.G12046 Trifolium pratense HOM05D008332 ORTHO05D010135 1.3e-07 61.6 116 30.2
VMungo0251G1724 Vigna mungo HOM05D009155 ORTHO05D004853 1.3e-07 61.6 156 28.2
VMungo0331G0576 Vigna mungo HOM05D009155 ORTHO05D004853 1.7e-07 61.2 135 28.9
Lalb_Chr11g0071031 Lupinus albus HOM05D009855 ORTHO05D001203 6.3e-07 59.3 55 50.9
TPR.G18912 Trifolium pratense HOM05D005718 ORTHO05D004853 6.3e-07 59.3 234 24.4
DCAR_017447 Daucus carota HOM05D007234 ORTHO05D008488 8.2e-07 58.9 216 21.8
VMungo0647G0776 Vigna mungo HOM05D009155 ORTHO05D004853 2.4e-06 57.4 150 27.3
Medtr6g023550 Medicago truncatula HOM05D005718 ORTHO05D004853 7.0e-06 55.8 202 20.8
TPR.G34605 Trifolium pratense HOM05D008332 ORTHO05D010135 9.1e-06 55.5 92 30.4


User provided reference genes

Program Settings