Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G104600 Phaseolus vulgaris HOM05D007194 ORTHO05D009182 6.5e-31 136.7 68 100.0
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 8.3e-10 66.6 46 76.1
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 1.1e-09 66.2 46 76.1
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 1.4e-09 65.9 46 76.1
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 1.4e-09 65.9 46 76.1
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 1.4e-09 65.9 46 76.1
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.4e-09 65.9 46 76.1
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.4e-09 65.9 46 76.1
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 1.4e-09 65.9 46 76.1
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 1.8e-09 65.5 46 73.9
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 4.1e-09 64.3 46 73.9
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 5.4e-09 63.9 46 73.9
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 5.4e-09 63.9 46 73.9
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 7.0e-09 63.5 46 73.9
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 9.1e-09 63.2 42 78.6
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 71.7
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 71.7
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 71.7
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 71.7
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 71.7
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 71.7
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 71.7
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 9.1e-09 63.2 46 73.9
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 2.0e-08 62.0 46 71.7
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 2.7e-08 61.6 46 71.7
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 2.7e-08 61.6 46 69.6
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.7e-08 61.6 46 71.7
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 3.5e-08 61.2 46 73.9
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 4.5e-08 60.8 46 71.7
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 5.9e-08 60.5 47 72.3
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 5.9e-08 60.5 46 69.6
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 5.9e-08 60.5 42 76.2
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 7.7e-08 60.1 46 71.7
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.3e-07 59.3 46 67.4
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 1.3e-07 59.3 45 71.1
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 1.3e-07 59.3 46 69.6
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 1.3e-07 59.3 46 69.6
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 1.7e-07 58.9 46 69.6
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 2.3e-07 58.5 46 69.6
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 2.3e-07 58.5 46 69.6
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 5.0e-07 57.4 42 73.8
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 5.0e-07 57.4 46 67.4
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.5e-06 55.8 42 71.4
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.9e-06 55.5 46 65.2
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 1.9e-06 55.5 46 65.2
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 3.3e-06 54.7 46 63.0
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 3.3e-06 54.7 46 65.2
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 3.3e-06 54.7 42 71.4
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 4.2e-06 54.3 46 65.2
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 5.5e-06 53.9 56 60.7
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 5.5e-06 53.9 44 68.2


User provided reference genes

Program Settings