Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G101032 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 1.4e-113 412.9 205 100.0
Phvul.002G188000 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 9.3e-89 330.5 173 94.8
VMungo0251G3194 Vigna mungo HOM05D003515 ORTHO05D004347 2.1e-77 292.7 173 84.4
Glyma.08G088900 Glycine max HOM05D003515 ORTHO05D004347 5.0e-58 228.4 184 67.4
arahy.Tifrunner.gnm1.ann1.ZWBN17 Arachis hypogaea HOM05D003515 ORTHO05D004347 2.9e-50 202.6 186 60.2
arahy.Tifrunner.gnm1.ann1.NQ3I2Y Arachis hypogaea HOM05D003515 ORTHO05D004347 6.1e-48 194.9 186 59.1
Lj4g0010619 Lotus japonicus HOM05D003515 ORTHO05D004347 1.0e-47 194.1 179 60.9
Ca_18232_v3 Cicer arietinum L. HOM05D003515 ORTHO05D004347 2.6e-46 189.5 186 59.1
Psat7g087560 Pisum sativum HOM05D003515 ORTHO05D004347 4.2e-41 172.2 179 55.3
Lalb_Chr13g0293411 Lupinus albus HOM05D003515 ORTHO05D004347 3.6e-40 169.1 179 57.0
Medtr4g094755 Medicago truncatula HOM05D003515 ORTHO05D004347 1.4e-39 167.2 181 56.4
TPR.G28148 Trifolium pratense HOM05D003515 ORTHO05D004347 8.0e-24 114.8 112 58.9
FAN16G1075 Fragaria x ananassa HOM05D003515 ORTHO05D004347 1.4e-15 87.4 143 41.3
FvH4_3g13010 Fragaria vesca HOM05D003515 ORTHO05D004347 5.2e-15 85.5 172 36.6
FAN11G3814 Fragaria x ananassa HOM05D003515 ORTHO05D004347 5.2e-15 85.5 172 36.6
CiPaw.10G105500 Carya illinoinensis HOM05D003515 ORTHO05D004347 6.8e-15 85.1 176 38.6
Haze_05267 Corylus avellana HOM05D003515 ORTHO05D004347 1.2e-14 84.3 155 36.1
Cfa001125 Carpinus fangiana HOM05D003515 ORTHO05D004347 7.5e-14 81.6 178 33.1
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 7.5e-14 81.6 113 46.0
FAN21G1878 Fragaria x ananassa HOM05D003515 ORTHO05D004347 1.7e-13 80.5 114 45.6
RcHm_v2.0_Chr5g0021121 Rosa chinensis HOM05D003515 ORTHO05D004347 2.2e-13 80.1 127 40.2
Dinv07004 Davidia involucrata HOM05D003515 ORTHO05D004347 8.3e-13 78.2 175 32.0
RcHm_v2.0_Chr5g0021201 Rosa chinensis HOM05D003515 ORTHO05D004347 2.4e-12 76.6 113 44.2
Lj1C1149T14 Lonicera japonica HOM05D003515 ORTHO05D004347 1.2e-11 74.3 188 33.0
CSS0015899 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.6e-11 73.9 171 31.0
Thecc.02G003700 Theobroma cacao HOM05D003515 ORTHO05D004347 1.6e-11 73.9 175 34.3
CSS0041884 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.5e-11 72.8 170 31.2
QL11p012061 Quercus lobata HOM05D003515 ORTHO05D004347 3.5e-11 72.8 177 35.0
Cpa.g.sc30.106 Carica papaya HOM05D003515 ORTHO05D004347 5.9e-11 72.0 111 40.5
Atru.chr10.315 Acer truncatum HOM05D003515 ORTHO05D004347 2.9e-10 69.7 171 32.2
CSS0001709 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.8e-10 69.3 171 32.2
Rhsim13G0134000 Rhododendron simsii HOM05D003515 ORTHO05D004347 1.1e-09 67.8 170 31.8
RhsimUnG0176900 Rhododendron simsii HOM05D003515 ORTHO05D004347 1.1e-09 67.8 170 31.8
ECA238G0584 Erigeron canadensis HOM05D003515 ORTHO05D004347 1.5e-09 67.4 138 36.2
MD10G1227100 Malus domestica HOM05D003515 ORTHO05D004347 1.5e-09 67.4 114 41.2
Prupe.4G118000 Prunus persica HOM05D003515 ORTHO05D004347 1.9e-09 67.0 129 38.8
CSS0004888 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.3e-09 66.2 171 29.8
BolC7t43303H Brassica oleracea HOM05D003515 ORTHO05D004347 4.3e-09 65.9 146 33.6
TAR624G0550 Trochodendron aralioides HOM05D003515 ORTHO05D004347 4.3e-09 65.9 169 36.1
Hma1.2p1_0088F.1_g045250 Hydrangea macrophylla HOM05D003515 ORTHO05D004347 5.6e-09 65.5 105 40.0
vmacro03558 Vaccinium macrocarpon HOM05D003515 ORTHO05D004347 5.6e-09 65.5 167 32.9
Eucgr.D00012 Eucalyptus grandis HOM05D003515 ORTHO05D004347 7.3e-09 65.1 73 52.1
TPR.G22047 Trifolium pratense HOM05D003515 ORTHO05D004347 7.3e-09 65.1 64 53.1
PGR004G1774 Punica granatum HOM05D003515 ORTHO05D004347 1.2e-08 64.3 46 65.2
C07p27710 Brassica napus HOM05D003515 ORTHO05D004347 1.6e-08 63.9 146 32.9
CANSAT35G1862 Cannabis sativa HOM05D003515 ORTHO05D004347 4.7e-08 62.4 164 31.7
MELO3C007012.2 Cucumis melo HOM05D003515 ORTHO05D004347 4.7e-08 62.4 41 63.4
ClCG01G025730 Citrullus lanatus HOM05D003515 ORTHO05D004347 8.0e-08 61.6 44 61.4
BraA06t27567Z Brassica rapa HOM05D003515 ORTHO05D004347 1.0e-07 61.2 121 34.7
Aa31LG9G8430 Aethionema arabicum HOM05D003515 ORTHO05D004347 1.8e-07 60.5 157 31.8
BcaNung07103 Brassica carinata HOM05D003515 ORTHO05D004347 2.3e-07 60.1 150 32.0
A06p46940 Brassica napus HOM05D003515 ORTHO05D004347 2.3e-07 60.1 146 32.2
Migut.M02011 Erythranthe guttata HOM05D003515 ORTHO05D004347 4.0e-07 59.3 105 37.1
HanXRQChr14g0439721 Helianthus annuus HOM05D003515 ORTHO05D004347 4.0e-07 59.3 31 74.2
GSVIVG01012151001 Vitis vinifera HOM05D003515 ORTHO05D004347 6.8e-07 58.5 57 54.4
CAN.G391.1 Capsicum annuum HOM05D003515 ORTHO05D004347 1.2e-06 57.8 108 36.1
Thhalv10000807m.g Eutrema salsugineum HOM05D003515 ORTHO05D004347 2.0e-06 57.0 148 32.4
Manes.03G074900 Manihot esculenta HOM05D003515 ORTHO05D004347 2.0e-06 57.0 101 38.6
Nn7g38343 Nelumbo nucifera HOM05D003515 ORTHO05D004347 2.0e-06 57.0 166 30.7
Solyc01g034150.4 Solanum lycopersicum HOM05D003515 ORTHO05D004347 2.6e-06 56.6 94 39.4
PGSC0003DMG402001013 Solanum tuberosum HOM05D003515 ORTHO05D004347 2.6e-06 56.6 126 34.9
Cc09_g05170 Coffea canephora HOM05D003515 ORTHO05D004347 3.4e-06 56.2 176 27.8
Gorai.009G257800 Gossypium raimondii HOM05D003515 ORTHO05D004347 4.4e-06 55.8 120 35.8
Gohir.D05G247100 Gossypium hirsutum HOM05D003515 ORTHO05D004347 5.7e-06 55.5 144 31.2
Carub.0008s0352 Capsella rubella HOM05D003515 ORTHO05D004347 7.5e-06 55.1 199 26.6
Sed0024374 Sechium edule HOM05D003515 ORTHO05D004347 7.5e-06 55.1 70 41.4
Sc05g0004760 Simmondsia chinensis HOM05D003515 ORTHO05D004347 7.5e-06 55.1 157 28.7
THA.LOC104812921 Tarenaya hassleriana HOM05D003515 ORTHO05D004347 9.8e-06 54.7 113 34.5


User provided reference genes

Program Settings