Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 2.5e-158 562.0 274 100.0
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 1.0e-146 523.5 273 90.5
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 7.1e-145 517.3 273 90.8
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 8.7e-135 483.8 275 85.5
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 8.2e-133 477.2 275 84.0
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 2.0e-131 472.6 272 83.1
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 2.6e-131 472.2 282 83.3
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 3.4e-131 471.9 282 83.3
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 8.5e-122 440.7 276 79.3
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 1.7e-117 426.4 285 74.0
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 2.2e-117 426.0 290 71.4
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 1.1e-116 423.7 282 74.8
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 1.8e-116 422.9 286 73.8
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 2.4e-116 422.5 271 74.9
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 2.4e-116 422.5 250 83.2
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 3.1e-116 422.2 276 75.0
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 3.1e-116 422.2 276 74.3
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 5.3e-116 421.4 282 73.4
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 7.0e-116 421.0 285 72.6
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 1.2e-115 420.2 223 89.7
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 1.6e-115 419.9 285 71.6
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 2.0e-115 419.5 291 71.5
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 3.5e-115 418.7 285 71.2
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 1.0e-114 417.2 285 73.7
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.3e-114 416.8 283 71.7
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 2.2e-114 416.0 281 72.2
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 2.9e-114 415.6 285 71.2
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 6.5e-114 414.5 285 71.9
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 1.9e-113 412.9 277 72.6
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.9e-113 412.9 289 70.2
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 4.2e-113 411.8 287 70.4
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 1.6e-112 409.8 251 81.7
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 4.7e-112 408.3 274 73.0
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 4.0e-111 405.2 273 71.8
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 4.0e-111 405.2 275 71.6
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 3.3e-110 402.1 277 71.5
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 1.7e-109 399.8 272 72.4
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.2e-109 399.4 224 81.2
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 4.1e-108 395.2 276 69.9
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 9.1e-108 394.0 223 81.2
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 7.7e-107 391.0 271 70.1
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 1.7e-106 389.8 277 71.8
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 2.2e-106 389.4 273 70.3
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 3.8e-106 388.7 277 69.0
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 1.1e-105 387.1 288 67.4
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.9e-105 386.3 281 70.8
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 1.9e-105 386.3 253 73.1
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 2.5e-105 386.0 251 73.3
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 4.2e-105 385.2 221 80.5
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 5.5e-105 384.8 261 71.3
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 7.2e-105 384.4 288 67.0
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.2e-104 383.6 222 80.6
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 1.6e-104 383.3 273 68.1
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 1.6e-104 383.3 276 68.8
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 2.7e-104 382.5 254 71.7
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 3.6e-104 382.1 277 67.5
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 6.1e-104 381.3 285 66.7
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 1.8e-103 379.8 278 67.6
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 4.0e-103 378.6 281 66.9
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 4.0e-103 378.6 256 72.3
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 6.8e-103 377.9 229 76.0
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 2.6e-102 375.9 286 65.4
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 2.6e-102 375.9 287 65.5
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 2.6e-102 375.9 274 66.4
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 7.5e-102 374.4 277 67.5
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 7.5e-102 374.4 293 66.6
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 2.2e-101 372.9 283 66.8
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 4.8e-101 371.7 282 65.2
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 8.3e-101 370.9 285 65.6
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 1.8e-100 369.8 223 77.1
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 3.1e-100 369.0 228 75.4
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 3.1e-100 369.0 256 69.9
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 3.1e-100 369.0 277 67.5
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 7.0e-100 367.9 284 65.8
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 7.0e-100 367.9 284 66.5
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 1.2e-99 367.1 234 74.8
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 1.2e-99 367.1 228 75.4
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 1.6e-99 366.7 277 64.3
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 1.6e-99 366.7 222 75.7
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 7.7e-99 364.4 284 65.5
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 7.7e-99 364.4 222 79.7
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 1.0e-98 364.0 285 65.3
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.7e-98 363.2 278 65.1
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 2.9e-98 362.5 283 64.0
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 5.0e-98 361.7 278 64.7
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 5.0e-98 361.7 284 66.9
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 6.5e-98 361.3 264 67.8
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 1.9e-97 359.8 276 63.4
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 5.5e-97 358.2 275 65.8
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 9.5e-97 357.5 274 63.5
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 4.7e-96 355.1 285 63.5
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 1.4e-95 353.6 241 68.9
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 2.2e-93 346.3 281 64.8
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 1.8e-92 343.2 308 59.1
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 1.8e-92 343.2 275 62.9
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 4.1e-92 342.0 229 72.9
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 1.0e-87 327.4 231 66.2
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 3.0e-87 325.9 234 70.9
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 5.2e-87 325.1 273 61.5
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 1.5e-86 323.6 233 66.5
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 2.0e-86 323.2 273 61.2
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 1.1e-84 317.4 271 56.5
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 1.1e-84 317.4 224 67.9
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 1.8e-84 316.6 207 72.9
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.2e-83 313.9 236 65.7
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 6.6e-82 308.1 271 59.0
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 3.6e-80 302.4 232 68.1
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 6.2e-80 301.6 272 56.6
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 1.2e-78 297.4 173 80.9
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 5.8e-78 295.0 223 60.1
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 9.2e-76 287.7 174 77.0
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.6e-75 287.0 164 79.3
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 1.9e-73 280.0 225 61.3
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 3.3e-73 279.3 167 77.2
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 1.4e-68 263.8 208 62.0
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 7.8e-67 258.1 165 71.5
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 2.6e-62 243.0 164 68.9
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 3.9e-58 229.2 157 66.9
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 4.3e-57 225.7 136 74.3
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 2.1e-56 223.4 131 78.6
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 2.1e-56 223.4 191 63.9
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 6.2e-56 221.9 191 61.8
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 1.1e-52 211.1 150 66.7
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 2.4e-52 209.9 241 53.5
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 6.0e-51 205.3 237 45.6
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 3.9e-50 202.6 156 62.2
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 1.0e-42 177.9 203 46.3
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 6.7e-42 175.3 133 60.2
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 9.0e-31 138.3 91 72.5
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 1.7e-29 134.0 131 55.7
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 2.2e-24 117.1 90 60.0
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 6.5e-21 105.5 133 46.6
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.5e-20 102.4 127 45.7
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 3.0e-18 96.7 82 58.5
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 6.5e-13 79.0 119 36.1
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 4.2e-12 76.3 112 40.2
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 6.1e-11 72.4 77 50.6
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 6.3e-08 62.4 54 55.6
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 2.4e-07 60.5 84 35.7


User provided reference genes

Program Settings