Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 3.7e-76 288.1 145 100.0
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 1.1e-72 276.6 145 95.2
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 3.5e-66 255.0 145 89.0
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 3.0e-65 251.9 145 89.0
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 3.3e-48 195.3 122 79.5
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 1.4e-46 189.9 123 76.4
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 1.7e-44 183.0 144 68.1
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 1.3e-41 173.3 146 62.3
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 1.7e-41 172.9 145 62.8
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 1.5e-40 169.9 113 72.6
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 1.5e-40 169.9 113 73.5
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 3.4e-37 158.7 202 47.0
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 3.4e-37 158.7 135 60.7
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 1.3e-36 156.8 99 75.8
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 3.2e-35 152.1 109 69.7
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 7.1e-35 151.0 147 55.1
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 7.1e-35 151.0 106 69.8
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 9.3e-35 150.6 124 62.9
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 1.2e-34 150.2 119 63.9
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 2.1e-34 149.4 98 72.4
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 2.1e-34 149.4 110 67.3
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 2.1e-34 149.4 132 60.6
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 6.0e-34 147.9 126 62.7
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 7.9e-34 147.5 103 70.9
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 1.0e-33 147.1 132 59.8
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 1.3e-33 146.7 125 60.0
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 1.8e-33 146.4 98 71.4
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 2.3e-33 146.0 146 54.1
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 2.3e-33 146.0 146 54.1
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 2.3e-33 146.0 149 55.0
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 2.3e-33 146.0 103 69.9
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 3.9e-33 145.2 113 64.6
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 6.7e-33 144.4 105 72.4
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 8.7e-33 144.1 104 67.3
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 8.7e-33 144.1 102 66.7
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 8.7e-33 144.1 103 68.9
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 1.5e-32 143.3 117 61.5
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 1.9e-32 142.9 147 55.1
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 2.5e-32 142.5 103 67.0
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 3.3e-32 142.1 103 66.0
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 5.6e-32 141.4 98 69.4
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 5.6e-32 141.4 109 66.1
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 7.4e-32 141.0 134 56.0
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 7.4e-32 141.0 106 63.2
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 7.4e-32 141.0 118 63.6
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 9.6e-32 140.6 121 57.9
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 1.3e-31 140.2 158 50.0
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 2.1e-31 139.4 116 62.9
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 2.8e-31 139.0 102 63.7
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 2.8e-31 139.0 104 65.4
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 4.8e-31 138.3 128 57.8
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 4.8e-31 138.3 121 56.2
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 6.2e-31 137.9 97 66.0
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 8.1e-31 137.5 101 64.4
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 1.1e-30 137.1 127 55.9
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 1.1e-30 137.1 116 62.1
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 1.1e-30 137.1 127 57.5
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 1.4e-30 136.7 98 67.3
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 1.4e-30 136.7 125 55.2
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 1.8e-30 136.3 116 60.3
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 1.8e-30 136.3 103 66.0
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 1.8e-30 136.3 104 62.5
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 2.4e-30 136.0 129 58.1
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 2.4e-30 136.0 105 63.8
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 3.1e-30 135.6 98 64.3
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 4.0e-30 135.2 130 53.8
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 5.3e-30 134.8 104 61.5
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 9.0e-30 134.0 106 64.2
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 1.5e-29 133.3 98 67.3
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 2.0e-29 132.9 102 63.7
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 2.6e-29 132.5 123 51.2
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 2.6e-29 132.5 109 59.6
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 3.4e-29 132.1 116 56.9
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 3.4e-29 132.1 104 61.5
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 4.5e-29 131.7 95 64.2
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 5.8e-29 131.3 105 61.9
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 7.6e-29 131.0 127 52.0
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 9.9e-29 130.6 105 61.9
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 9.9e-29 130.6 105 61.9
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 9.9e-29 130.6 105 61.9
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 1.3e-28 130.2 105 61.9
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 2.2e-28 129.4 106 59.4
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 2.2e-28 129.4 115 59.1
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 6.4e-28 127.9 107 61.7
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 6.4e-28 127.9 122 52.5
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 6.4e-28 127.9 125 54.4
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 1.1e-27 127.1 107 58.9
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.1e-27 127.1 125 54.4
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 1.4e-27 126.7 107 57.9
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 2.4e-27 125.9 107 60.7
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 5.5e-27 124.8 107 61.7
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 9.3e-27 124.0 107 61.7
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 9.3e-27 124.0 107 61.7
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 1.6e-26 123.2 110 48.2
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 3.5e-26 122.1 104 56.7
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 6.0e-26 121.3 116 52.6
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.3e-25 120.2 110 56.4
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.8e-25 119.8 126 49.2
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 3.0e-25 119.0 166 44.6
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 1.1e-24 117.1 123 51.2
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 1.1e-24 117.1 95 61.1
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 2.5e-24 115.9 98 59.2
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 1.3e-23 113.6 137 46.0
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 9.0e-22 107.5 168 38.7
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 1.5e-21 106.7 92 60.9
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 4.2e-19 98.6 111 49.5
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 5.5e-19 98.2 73 67.1
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.6e-18 96.7 116 50.0
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 2.1e-18 96.3 104 44.2
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 1.8e-17 93.2 62 74.2
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 5.1e-17 91.7 106 47.2
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 1.1e-16 90.5 54 79.6
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 3.3e-16 89.0 54 74.1
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 2.8e-15 85.9 61 63.9
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 1.1e-14 84.0 94 43.6
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 3.1e-14 82.4 98 37.8
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 4.1e-14 82.0 97 42.3
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 5.3e-14 81.6 54 75.9
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 3.9e-09 65.5 95 36.8
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 6.3e-07 58.2 90 32.2
Actinidia14692 Actinidia chinensis HOM05D001428 ORTHO05D001306 2.4e-06 56.2 84 40.5
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 4.1e-06 55.5 46 52.2


User provided reference genes

Program Settings