Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G090200 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 1.7e-79 299.3 154 100.0
Glyma.20G176200 Glycine max HOM05D007935 ORTHO05D007393 1.1e-46 190.3 163 67.5
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 2.1e-45 186.0 163 65.6
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 5.4e-25 118.2 153 51.0
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 1.2e-24 117.1 156 51.9
VMungo0720G2340 Vigna mungo HOM05D000170 ORTHO05D007393 7.8e-24 114.4 111 64.0
Medtr1g096290 Medicago truncatula HOM05D007935 ORTHO05D007393 9.6e-22 107.5 150 43.3
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 1.4e-20 103.6 160 47.5
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 2.4e-20 102.8 155 48.4
Lj5g0011924 Lotus japonicus HOM05D007935 ORTHO05D007393 5.3e-20 101.7 158 46.2
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 5.8e-19 98.2 151 45.7
TPR.G39557 Trifolium pratense HOM05D007935 ORTHO05D007393 2.9e-18 95.9 154 42.9
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 2.1e-13 79.7 160 42.5
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 4.8e-13 78.6 160 42.5
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 8.1e-13 77.8 153 39.2
Psat6g186560 Pisum sativum HOM05D007935 ORTHO05D007393 1.8e-12 76.6 149 36.9
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 9.9e-11 70.9 163 39.9
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 1.3e-10 70.5 147 38.1
VMungo0464G1609 Vigna mungo HOM05D007935 ORTHO05D007393 1.7e-10 70.1 159 37.7
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 6.4e-10 68.2 157 38.9
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 1.9e-09 66.6 172 38.4
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 2.1e-08 63.2 165 38.2
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 3.9e-07 58.9 164 33.5
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 5.1e-07 58.5 175 32.6
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 8.7e-07 57.8 147 37.4
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 8.7e-07 57.8 147 36.7
arahy.Tifrunner.gnm1.ann1.DLN685 Arachis hypogaea HOM05D007935 ORTHO05D007393 1.9e-06 56.6 161 36.6
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 2.5e-06 56.2 172 31.4


User provided reference genes

Program Settings