Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.5e-133 479.6 241 100.0
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 1.2e-98 363.6 219 85.4
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 1.7e-94 349.7 219 84.0
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 2.9e-81 305.8 219 74.4
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 1.7e-78 296.6 219 72.1
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 2.3e-78 296.2 221 73.3
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 5.2e-75 285.0 220 70.0
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 1.2e-71 273.9 247 62.8
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 2.2e-65 253.1 220 66.8
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 3.2e-64 249.2 220 66.8
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 1.1e-53 214.2 226 56.6
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 5.6e-53 211.8 219 55.7
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 6.2e-52 208.4 219 56.2
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 3.1e-51 206.1 222 56.3
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 5.3e-51 205.3 216 55.6
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 9.0e-51 204.5 219 55.7
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 9.0e-51 204.5 178 62.9
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 1.2e-50 204.1 185 63.2
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 2.0e-50 203.4 146 74.0
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 2.0e-50 203.4 219 56.2
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 7.6e-50 201.4 177 63.3
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 7.6e-50 201.4 219 54.3
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.0e-49 201.1 229 54.1
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 1.7e-49 200.3 172 62.8
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 4.9e-49 198.7 182 61.0
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 6.5e-49 198.4 177 62.7
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 1.1e-48 197.6 223 53.4
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 1.4e-48 197.2 198 58.1
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 2.5e-48 196.4 218 55.0
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.5e-48 196.4 122 81.1
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.5e-48 196.4 122 81.1
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 4.2e-48 195.7 118 81.4
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 5.5e-48 195.3 158 67.7
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 7.1e-48 194.9 174 61.5
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 9.3e-48 194.5 205 55.1
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 1.6e-47 193.7 205 53.7
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 3.5e-47 192.6 224 54.0
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 3.5e-47 192.6 124 76.6
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 4.6e-47 192.2 224 53.6
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 4.6e-47 192.2 225 54.2
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 6.0e-47 191.8 129 76.7
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 6.0e-47 191.8 181 61.9
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 6.0e-47 191.8 116 81.9
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.0e-46 191.0 189 57.1
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 1.8e-46 190.3 115 81.7
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.8e-46 190.3 178 59.0
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 2.3e-46 189.9 189 56.1
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.3e-46 189.9 125 75.2
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 3.0e-46 189.5 204 55.9
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 3.9e-46 189.1 195 55.9
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 5.1e-46 188.7 177 58.8
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 6.7e-46 188.3 124 73.4
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 6.7e-46 188.3 137 73.7
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 6.7e-46 188.3 149 69.1
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 6.7e-46 188.3 178 57.9
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 6.7e-46 188.3 120 80.0
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 6.7e-46 188.3 120 80.0
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 8.7e-46 188.0 122 78.7
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 8.7e-46 188.0 118 81.4
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 1.5e-45 187.2 197 57.4
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 1.5e-45 187.2 116 82.8
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 2.5e-45 186.4 114 80.7
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 4.3e-45 185.7 133 69.2
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 4.3e-45 185.7 133 69.2
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 5.7e-45 185.3 217 50.7
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 9.6e-45 184.5 109 85.3
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 1.6e-44 183.7 177 58.8
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 4.8e-44 182.2 120 76.7
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 4.8e-44 182.2 127 73.2
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 6.3e-44 181.8 182 56.6
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 6.3e-44 181.8 141 70.2
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 8.2e-44 181.4 153 66.0
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 1.4e-43 180.6 141 70.2
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 2.4e-43 179.9 131 71.0
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 2.4e-43 179.9 105 86.7
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 3.1e-43 179.5 130 70.0
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 4.1e-43 179.1 103 86.4
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 5.3e-43 178.7 118 77.1
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 5.3e-43 178.7 108 81.5
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 9.0e-43 177.9 133 69.9
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 1.2e-42 177.6 117 77.8
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.2e-42 177.6 107 81.3
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 1.2e-42 177.6 108 80.6
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 1.5e-42 177.2 145 64.8
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 1.5e-42 177.2 145 64.8
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 1.5e-42 177.2 145 64.8
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 1.5e-42 177.2 220 49.5
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 2.0e-42 176.8 117 77.8
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 2.0e-42 176.8 148 64.2
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 2.6e-42 176.4 145 65.5
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 2.6e-42 176.4 104 80.8
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 3.4e-42 176.0 117 77.8
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 4.5e-42 175.6 100 88.0
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 7.6e-42 174.9 143 65.0
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 7.6e-42 174.9 107 83.2
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 1.9e-40 170.2 149 61.1
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 5.5e-40 168.7 108 78.7
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 5.5e-40 168.7 104 77.9
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 5.5e-40 168.7 104 77.9
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 1.8e-38 163.7 102 79.4
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 3.0e-38 162.9 102 79.4
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 5.9e-34 148.7 146 54.1
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 2.2e-33 146.7 103 68.9
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 1.9e-32 143.7 103 68.9
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 1.9e-32 143.7 103 68.0
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 4.6e-31 139.0 97 75.3
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 1.7e-28 130.6 98 63.3
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 1.1e-27 127.9 70 85.7
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 5.3e-27 125.6 78 79.5
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 2.2e-25 120.2 176 44.9
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 1.8e-19 100.5 93 51.6
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 7.7e-18 95.1 62 80.6
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 3.8e-17 92.8 55 81.8
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 2.5e-16 90.1 44 90.9
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 2.1e-15 87.0 74 55.4
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 5.7e-13 79.0 105 44.8
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.6e-10 70.9 44 72.7


User provided reference genes

Program Settings