Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 1.1e-142 510.0 258 100.0
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 1.3e-116 423.3 259 87.3
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 1.3e-100 370.2 261 78.9
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 5.6e-99 364.8 260 79.2
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 3.5e-69 265.8 269 58.4
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 3.6e-66 255.8 262 58.4
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 1.2e-61 240.7 274 56.9
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 5.3e-57 225.3 256 55.9
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 8.4e-55 218.0 258 54.3
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 1.1e-49 201.1 257 52.1
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 6.9e-49 198.4 257 51.8
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 2.5e-38 163.3 282 41.8
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 6.9e-33 145.2 289 41.2
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 1.3e-31 141.0 284 39.1
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 7.2e-30 135.2 276 41.7
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 2.3e-28 130.2 252 40.5
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.1e-25 121.3 266 36.8
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.4e-25 120.9 259 38.2
Lalb_Chr06g0164231 Lupinus albus HOM05D006494 ORTHO05D007787 1.8e-25 120.6 94 67.0
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 1.2e-24 117.9 263 40.3
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 4.5e-24 115.9 272 36.0
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.0e-23 114.8 279 36.6
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 1.3e-23 114.4 270 36.7
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 3.8e-23 112.8 271 36.9
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.1e-22 111.3 230 38.7
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.5e-22 110.2 261 37.2
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 2.5e-22 110.2 264 35.2
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 3.2e-22 109.8 266 38.0
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 9.4e-22 108.2 258 36.0
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 1.6e-21 107.5 273 36.6
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 2.7e-21 106.7 260 35.8
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 8.0e-21 105.1 260 38.5
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.0e-20 104.8 248 37.5
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 2.3e-20 103.6 270 35.9
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 6.7e-20 102.1 263 37.6
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 6.7e-20 102.1 267 37.1
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 8.8e-20 101.7 266 34.2
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 3.3e-19 99.8 263 35.7
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.4e-19 99.4 270 34.8
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 4.4e-19 99.4 273 34.4
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 9.7e-19 98.2 272 32.7
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 9.7e-19 98.2 258 34.5
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.3e-18 97.8 262 35.1
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 2.2e-18 97.1 271 32.8
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.7e-18 96.3 269 32.3
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 3.7e-18 96.3 253 35.2
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 4.8e-18 95.9 225 33.8
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 6.3e-18 95.5 262 34.7
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 1.1e-17 94.7 260 35.0
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 3.1e-17 93.2 263 33.5
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 3.1e-17 93.2 261 34.5
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 5.3e-17 92.4 282 35.1
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 7.0e-17 92.0 261 33.3
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 1.2e-16 91.3 276 34.1
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 1.0e-15 88.2 264 36.4
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 1.0e-15 88.2 263 33.8
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.0e-15 88.2 262 32.8
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.3e-15 87.8 256 34.0
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.3e-15 87.8 256 34.0
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 2.2e-15 87.0 229 32.8
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 2.9e-15 86.7 262 33.6
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.9e-14 84.0 162 37.0
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 1.9e-14 84.0 265 30.2
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 1.9e-14 84.0 200 37.0
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 4.2e-14 82.8 266 31.6
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 2.1e-13 80.5 259 31.7
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 3.6e-13 79.7 226 33.2
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 3.6e-13 79.7 264 32.2
arahy.Tifrunner.gnm1.ann1.78PZ7R Arachis hypogaea HOM05D062081 ORTHO05D007787 4.7e-13 79.3 253 35.2
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.0e-12 78.2 265 29.8
arahy.Tifrunner.gnm1.ann1.P4DBMR Arachis hypogaea HOM05D062081 ORTHO05D007787 1.4e-12 77.8 269 34.6
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 1.4e-12 77.8 265 28.3
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.3e-12 77.0 216 31.9
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 2.3e-12 77.0 214 35.5
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.0e-12 76.3 169 34.9
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 5.2e-12 75.9 265 32.5
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.2e-11 74.7 265 32.8
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.5e-11 74.3 262 30.5
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 1.5e-11 74.3 222 31.1
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 2.6e-11 73.6 262 30.5
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 5.7e-11 72.4 218 33.5
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 7.5e-11 72.0 265 29.1
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 9.8e-11 71.6 219 30.1
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.7e-10 70.9 260 29.6
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 2.2e-10 70.5 242 33.5
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.2e-10 70.5 260 29.6
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 4.8e-10 69.3 119 37.0
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 4.8e-10 69.3 225 33.8
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 6.3e-10 68.9 216 32.4
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 8.3e-10 68.6 261 28.4
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.4e-09 67.8 318 27.4
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.4e-09 67.0 266 32.3
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 3.1e-09 66.6 280 30.7
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 9.1e-09 65.1 270 30.7
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 2.0e-08 63.9 211 32.2
arahy.Tifrunner.gnm1.ann1.Q03G4Y Arachis hypogaea HOM05D059322 ORTHO05D007787 2.7e-08 63.5 154 39.6
VMungo0647G0693 Vigna mungo HOM05D006494 ORTHO05D007787 3.5e-08 63.2 43 79.1
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.0e-07 61.6 160 33.8
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 1.0e-07 61.6 264 27.7
TPR.G763 Trifolium pratense HOM05D006494 ORTHO05D007787 1.0e-07 61.6 63 58.7
COL.COLO4_10083 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.9e-07 60.1 149 37.6
RcHm_v2.0_Chr3g0486201 Rosa chinensis HOM05D006494 ORTHO05D007787 5.0e-07 59.3 256 27.3
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 5.0e-07 59.3 211 29.9
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 3.2e-06 56.6 193 29.5
arahy.Tifrunner.gnm1.ann1.GMZ10Y Arachis hypogaea HOM05D059322 ORTHO05D007787 7.2e-06 55.5 161 35.4


User provided reference genes

Program Settings