Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G072700 Phaseolus vulgaris HOM05D012685 ORTHO05D008631 2.0e-138 495.7 246 100.0
VMungo0720G0494 Vigna mungo HOM05D012685 ORTHO05D008631 2.4e-107 392.5 212 86.8
Glyma.20G161400 Glycine max HOM05D012685 ORTHO05D008631 3.9e-102 375.2 210 82.4
Lalb_Chr06g0161251 Lupinus albus HOM05D012685 ORTHO05D008631 2.5e-88 329.3 209 70.3
Glyma.10G232900 Glycine max HOM05D012685 ORTHO05D008631 8.4e-36 154.8 91 76.9
Lj1g0007433 Lotus japonicus HOM05D012685 ORTHO05D008631 7.1e-35 151.8 182 40.7
Glyma.10G233000 Glycine max HOM05D012685 ORTHO05D008631 5.1e-33 145.6 86 77.9
Lj5g0010936 Lotus japonicus HOM05D012685 ORTHO05D008631 1.2e-29 134.4 151 43.7
LjContig00047_ERROPOS266959g0012704 Lotus japonicus HOM05D012685 ORTHO05D008631 2.4e-27 126.7 173 37.0
VMungo1383G1008 Vigna mungo HOM05D012259 ORTHO05D008631 1.6e-26 124.0 202 29.7
Medtr0008s0230 Medicago truncatula HOM05D012685 ORTHO05D008631 1.0e-25 121.3 175 38.9
VMungo1309G2316 Vigna mungo HOM05D008141 ORTHO05D008631 1.1e-24 117.9 198 29.3
Rhsim06G0095800 Rhododendron simsii HOM05D011426 ORTHO05D011041 3.6e-23 112.8 218 31.2
VMungo1127G0057 Vigna mungo HOM05D008141 ORTHO05D008631 2.4e-22 110.2 198 28.8
Rhsim11G0142500 Rhododendron simsii HOM05D011426 ORTHO05D011041 5.3e-22 109.0 197 32.0
VMungo1383G1806 Vigna mungo HOM05D012259 ORTHO05D008631 5.3e-22 109.0 197 27.4
Rhsim05G0131400 Rhododendron simsii HOM05D011426 ORTHO05D011041 9.0e-22 108.2 192 33.3
arahy.Tifrunner.gnm1.ann1.X5094R Arachis hypogaea HOM05D028381 ORTHO05D008631 5.4e-19 99.0 153 34.0
VMungo0540G2361 Vigna mungo HOM05D012259 ORTHO05D008631 9.3e-19 98.2 203 27.6
VMungo0251G1873 Vigna mungo HOM05D008141 ORTHO05D008631 1.3e-17 94.4 137 28.5
TPR.G10654 Trifolium pratense HOM05D012685 ORTHO05D008631 1.8e-17 94.0 68 55.9
VMungo0331G1981 Vigna mungo HOM05D008141 ORTHO05D008631 1.1e-16 91.3 172 28.5
VMungo0720G1248 Vigna mungo HOM05D008141 ORTHO05D008631 7.4e-16 88.6 172 27.3
VMungo0251G1062 Vigna mungo HOM05D008141 ORTHO05D008631 1.6e-15 87.4 172 26.2
Nn3g19362 Nelumbo nucifera HOM05D002639 ORTHO05D008631 6.2e-15 85.5 193 26.4
VMungo0152G0001 Vigna mungo HOM05D008141 ORTHO05D008631 1.4e-14 84.3 172 26.7
Rhsim07G0089400 Rhododendron simsii HOM05D011426 ORTHO05D016548 1.8e-14 84.0 150 31.3
Dinv33528 Davidia involucrata HOM05D007544 ORTHO05D009682 4.0e-14 82.8 188 30.3
VMungo0647G1172 Vigna mungo HOM05D008141 ORTHO05D008631 4.0e-14 82.8 172 26.7
Nn3g19361 Nelumbo nucifera HOM05D002639 ORTHO05D003094 6.9e-14 82.0 194 26.8
Nn3g19359 Nelumbo nucifera HOM05D002639 ORTHO05D003094 9.0e-14 81.6 195 28.2
VMungo1080G0684 Vigna mungo HOM05D008141 ORTHO05D008631 1.2e-13 81.3 142 28.9
Dinv03026 Davidia involucrata HOM05D007544 ORTHO05D009682 7.6e-13 78.6 189 29.1
VMungo0464G0897 Vigna mungo HOM05D008141 ORTHO05D008631 2.9e-12 76.6 205 24.4
TPR.G9415 Trifolium pratense HOM05D012685 ORTHO05D008631 4.9e-12 75.9 82 46.3
VMungo1127G1007 Vigna mungo HOM05D008141 ORTHO05D008631 6.4e-12 75.5 207 24.6
arahy.Tifrunner.gnm1.ann1.MTV0MP Arachis hypogaea HOM05D010495 ORTHO05D011630 1.1e-11 74.7 197 25.9
Rhsim10G0108400 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.1e-11 74.7 206 27.7
VMungo0647G1716 Vigna mungo HOM05D008141 ORTHO05D008631 1.9e-11 73.9 81 39.5
VMungo1383G0729 Vigna mungo HOM05D008141 ORTHO05D008631 1.9e-11 73.9 125 28.0
arahy.Tifrunner.gnm1.ann1.047JWD Arachis hypogaea HOM05D028381 ORTHO05D008631 3.2e-11 73.2 92 42.4
VMungo1383G3315 Vigna mungo HOM05D008141 ORTHO05D008631 4.2e-11 72.8 174 23.6
RhsimUnG0240000 Rhododendron simsii HOM05D009719 ORTHO05D011041 5.5e-11 72.4 178 28.1
Dinv03400 Davidia involucrata HOM05D007544 ORTHO05D009682 2.1e-10 70.5 150 32.7
Dinv06169 Davidia involucrata HOM05D007544 ORTHO05D009682 2.1e-10 70.5 150 32.7
Dinv27416 Davidia involucrata HOM05D007544 ORTHO05D009682 2.1e-10 70.5 150 32.7
Dinv32157 Davidia involucrata HOM05D007544 ORTHO05D009682 2.1e-10 70.5 150 32.7
Dinv33672 Davidia involucrata HOM05D007544 ORTHO05D009682 2.1e-10 70.5 150 32.7
Dinv36805 Davidia involucrata HOM05D007544 ORTHO05D009682 2.1e-10 70.5 150 32.7
AT4G00690 Arabidopsis thaliana HOM05D002639 ORTHO05D003094 2.7e-10 70.1 150 28.7
Dinv01822 Davidia involucrata HOM05D007544 ORTHO05D009682 2.7e-10 70.1 150 32.7
Dinv12874 Davidia involucrata HOM05D007544 ORTHO05D009682 2.7e-10 70.1 150 32.7
Dinv22079 Davidia involucrata HOM05D007544 ORTHO05D009682 2.7e-10 70.1 150 32.7
VMungo1215G2916 Vigna mungo HOM05D008141 ORTHO05D008631 2.7e-10 70.1 83 36.1
arahy.Tifrunner.gnm1.ann1.L5U948 Arachis hypogaea HOM05D010495 ORTHO05D011630 3.5e-10 69.7 197 24.9
VMungo0331G1266 Vigna mungo HOM05D008141 ORTHO05D008631 4.6e-10 69.3 132 25.0
arahy.Tifrunner.gnm1.ann1.R59EPS Arachis hypogaea HOM05D000005 ORTHO05D000012 7.9e-10 68.6 80 41.2
Dinv02392 Davidia involucrata HOM05D007544 ORTHO05D009682 7.9e-10 68.6 150 32.0
arahy.Tifrunner.gnm1.ann1.E2H9AL Arachis hypogaea HOM05D028381 ORTHO05D008631 1.0e-09 68.2 94 38.3
Rhsim12G0083900 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.0e-09 68.2 177 27.1
TPR.G18321 Trifolium pratense HOM05D011422 ORTHO05D011575 1.3e-09 67.8 80 43.8
VMungo0331G1058 Vigna mungo HOM05D008141 ORTHO05D008631 1.3e-09 67.8 80 36.2
Dinv35460 Davidia involucrata HOM05D007544 ORTHO05D009682 2.3e-09 67.0 134 31.3
VMungo0331G0653 Vigna mungo HOM05D008141 ORTHO05D008631 2.3e-09 67.0 78 35.9
Dinv02312 Davidia involucrata HOM05D007544 ORTHO05D009682 3.0e-09 66.6 148 30.4
VMungo0720G0462 Vigna mungo HOM05D008141 ORTHO05D008631 3.0e-09 66.6 136 28.7
Oeu035678.1 Olea europaea HOM05D002639 ORTHO05D003094 5.1e-09 65.9 169 26.6
arahy.Tifrunner.gnm1.ann1.4WBN6F Arachis hypogaea HOM05D008486 ORTHO05D010657 6.7e-09 65.5 117 31.6
Dinv16906 Davidia involucrata HOM05D007544 ORTHO05D009682 6.7e-09 65.5 141 31.2
Thhalv10005561m.g Eutrema salsugineum HOM05D002639 ORTHO05D003094 6.7e-09 65.5 150 30.7
Lj6g0010804 Lotus japonicus HOM05D012685 ORTHO05D008631 6.7e-09 65.5 96 34.4
Phvul.001G052350 Phaseolus vulgaris HOM05D012259 ORTHO05D008631 6.7e-09 65.5 117 34.2
Carub.0007s3326 Capsella rubella HOM05D002639 ORTHO05D003094 8.7e-09 65.1 152 29.6
Zm00001eb111330 Zea mays HOM05D002639 ORTHO05D003094 8.7e-09 65.1 184 25.5
Rhsim01G0005200 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.1e-08 64.7 106 33.0
ATR0796G180 Amborella trichopoda HOM05D002639 ORTHO05D003094 1.5e-08 64.3 185 25.4
arahy.Tifrunner.gnm1.ann1.5EE5R6 Arachis hypogaea HOM05D010495 ORTHO05D011630 1.5e-08 64.3 183 25.7
BraA03t14040Z Brassica rapa HOM05D002639 ORTHO05D003094 1.9e-08 63.9 181 24.9
Dinv29929 Davidia involucrata HOM05D007544 ORTHO05D009682 1.9e-08 63.9 148 29.7
arahy.Tifrunner.gnm1.ann1.KEH6R9 Arachis hypogaea HOM05D008486 ORTHO05D010657 2.5e-08 63.5 130 30.0
CARHR180480 Cardamine hirsuta HOM05D002639 ORTHO05D003094 2.5e-08 63.5 148 29.7
Dinv09286 Davidia involucrata HOM05D010670 ORTHO05D013864 2.5e-08 63.5 210 24.8
VMungo1127G0442 Vigna mungo HOM05D008141 ORTHO05D008631 2.5e-08 63.5 171 22.8
arahy.Tifrunner.gnm1.ann1.YY8UWK Arachis hypogaea HOM05D008486 ORTHO05D010657 4.3e-08 62.8 130 30.0
Cpa.g.sc16.178 Carica papaya HOM05D002639 ORTHO05D003094 4.3e-08 62.8 147 29.9
Dinv09689 Davidia involucrata HOM05D007544 ORTHO05D009682 4.3e-08 62.8 125 33.6
TAR362G0372 Trochodendron aralioides HOM05D003063 ORTHO05D003242 5.6e-08 62.4 101 32.7
VMungo0251G1844 Vigna mungo HOM05D008141 ORTHO05D008631 5.6e-08 62.4 65 36.9
VMungo1127G0517 Vigna mungo HOM05D000004 ORTHO05D008631 5.6e-08 62.4 73 38.4
VMungo1383G2238 Vigna mungo HOM05D000016 ORTHO05D000433 5.6e-08 62.4 69 37.7
MD16G1167200 Malus domestica HOM05D002639 ORTHO05D003094 7.4e-08 62.0 188 28.2
BcaC06g33440 Brassica carinata HOM05D002639 ORTHO05D003094 9.6e-08 61.6 175 26.9
HanXRQChr06g0173971 Helianthus annuus HOM05D002639 ORTHO05D003094 9.6e-08 61.6 189 25.9
TPR.G3166 Trifolium pratense HOM05D002639 ORTHO05D003094 9.6e-08 61.6 169 26.0
C07p47470 Brassica napus HOM05D002639 ORTHO05D003094 1.3e-07 61.2 175 26.9
BolC7t45274H Brassica oleracea HOM05D002639 ORTHO05D003094 1.3e-07 61.2 175 26.9
Glyma.07G246900 Glycine max HOM05D002639 ORTHO05D003094 1.3e-07 61.2 162 25.9
PSO675G4138 Papaver somniferum HOM05D002639 ORTHO05D003094 1.3e-07 61.2 193 25.9
SGA_v2.0_scaffold67G22629 Striga asiatica HOM05D002639 ORTHO05D003094 1.3e-07 61.2 192 26.6
VMungo0331G0152 Vigna mungo HOM05D002026 ORTHO05D008631 1.3e-07 61.2 91 31.9
VMungo0720G1427 Vigna mungo HOM05D012259 ORTHO05D008631 1.3e-07 61.2 62 37.1
Aa31LG8G3730 Aethionema arabicum HOM05D002639 ORTHO05D003094 1.6e-07 60.8 175 28.0
Nitab4.5_0000960g0070 Nicotiana tabacum HOM05D002639 ORTHO05D003094 1.6e-07 60.8 168 26.8
Peaxi162Scf00498g00738 Petunia axillaris HOM05D002639 ORTHO05D003094 1.6e-07 60.8 166 26.5
BcaC06g32970 Brassica carinata HOM05D002639 ORTHO05D003094 2.8e-07 60.1 170 25.3
ECA246G1134 Erigeron canadensis HOM05D002639 ORTHO05D003094 2.8e-07 60.1 167 26.3
vmacro22169 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 2.8e-07 60.1 114 31.6
AL7G47080 Arabidopsis lyrata HOM05D002639 ORTHO05D003094 3.7e-07 59.7 151 27.2
Thhalv10025061m.g Eutrema salsugineum HOM05D002639 ORTHO05D003094 3.7e-07 59.7 175 26.3
Ah.13g074620 Amaranthus hybridus HOM05D002639 ORTHO05D003094 4.8e-07 59.3 177 24.3
Solyc01g066830.3 Solanum lycopersicum HOM05D002639 ORTHO05D003094 4.8e-07 59.3 165 24.8
Sopen01g028430 Solanum pennellii HOM05D002639 ORTHO05D003094 4.8e-07 59.3 165 24.8
Aa31LG5G17480 Aethionema arabicum HOM05D002639 ORTHO05D003094 6.2e-07 58.9 174 26.4
EL10Ac3g06606 Beta vulgaris HOM05D002639 ORTHO05D003094 6.2e-07 58.9 174 26.4
MD13G1167800 Malus domestica HOM05D002639 ORTHO05D003094 6.2e-07 58.9 188 27.7
Phvul.009G248500 Phaseolus vulgaris HOM05D002639 ORTHO05D003094 6.2e-07 58.9 185 23.8
Sc13g0003440 Simmondsia chinensis HOM05D002639 ORTHO05D003094 6.2e-07 58.9 149 28.2
Aqoxy5G01933 Aquilegia oxysepala HOM05D020134 ORTHO05D016548 8.1e-07 58.5 134 28.4
BcaC02g09510 Brassica carinata HOM05D002639 ORTHO05D003094 8.1e-07 58.5 132 28.8
C04p43590 Brassica napus HOM05D002639 ORTHO05D003094 8.1e-07 58.5 132 28.8
BolC4t25940H Brassica oleracea HOM05D002639 ORTHO05D003094 8.1e-07 58.5 132 28.8
BraA04t16673Z Brassica rapa HOM05D002639 ORTHO05D003094 8.1e-07 58.5 132 29.5
Pp3c23_850 Physcomitrium patens HOM05D002639 ORTHO05D003094 8.1e-07 58.5 145 28.3
THA.LOC104820271 Tarenaya hassleriana HOM05D002639 ORTHO05D003094 8.1e-07 58.5 178 25.8
Ah.04g153570 Amaranthus hybridus HOM05D002639 ORTHO05D003094 1.1e-06 58.2 190 24.2
AL7G39400 Arabidopsis lyrata HOM05D002639 ORTHO05D003094 1.1e-06 58.2 233 24.0
Ca_01932_v3 Cicer arietinum L. HOM05D002639 ORTHO05D003094 1.1e-06 58.2 174 25.9
Lsat_1_v5_gn_3_24681 Lactuca sativa HOM05D002639 ORTHO05D003094 1.1e-06 58.2 189 26.5
Psat1g154240 Pisum sativum HOM05D002639 ORTHO05D003094 1.1e-06 58.2 147 27.2
Prupe.1G135200 Prunus persica HOM05D002639 ORTHO05D003094 1.1e-06 58.2 186 25.8
CANSAT25G1316 Cannabis sativa HOM05D014696 ORTHO05D010823 1.4e-06 57.8 182 25.3
CANSAT64G0311 Cannabis sativa HOM05D009769 ORTHO05D010823 1.4e-06 57.8 162 27.8
CAN.G129.28 Capsicum annuum HOM05D002639 ORTHO05D003094 1.4e-06 57.8 168 26.2
CARHR290400 Cardamine hirsuta HOM05D002639 ORTHO05D003094 1.4e-06 57.8 150 26.0
COL.COLO4_13861 Corchorus olitorius HOM05D002639 ORTHO05D003094 1.4e-06 57.8 171 26.9
VMungo0647G2245 Vigna mungo HOM05D008141 ORTHO05D008631 1.4e-06 57.8 64 40.6
arahy.Tifrunner.gnm1.ann1.S6I1JJ Arachis hypogaea HOM05D010495 ORTHO05D011630 1.8e-06 57.4 152 26.3
A04p10120 Brassica napus HOM05D002639 ORTHO05D003094 1.8e-06 57.4 132 28.8
Potri.008G221500 Populus trichocarpa HOM05D002639 ORTHO05D003094 1.8e-06 57.4 116 30.2
Rhsim01G0162800 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.8e-06 57.4 144 27.8
Sp7g06040 Schrenkiella parvula HOM05D002639 ORTHO05D003094 1.8e-06 57.4 150 27.3
VMungo1383G1507 Vigna mungo HOM05D012259 ORTHO05D024731 1.8e-06 57.4 63 36.5
GSVIVG01014620001 Vitis vinifera HOM05D007651 ORTHO05D013864 1.8e-06 57.4 192 23.4
Carub.0007s2578 Capsella rubella HOM05D002639 ORTHO05D003094 2.4e-06 57.0 233 23.6
Ca_12022_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.4e-06 57.0 157 28.7
FvH4_1g26761 Fragaria vesca HOM05D032641 ORTHO05D035628 2.4e-06 57.0 146 27.4
Sp7g14290 Schrenkiella parvula HOM05D002639 ORTHO05D003094 2.4e-06 57.0 233 23.6
A08p12010 Brassica napus HOM05D002639 ORTHO05D003094 3.1e-06 56.6 233 23.6
AUR62040372 Chenopodium quinoa HOM05D002639 ORTHO05D003094 3.1e-06 56.6 146 27.4
Cc03_g01820 Coffea canephora HOM05D002639 ORTHO05D003094 3.1e-06 56.6 169 24.9
Sp3g05860 Schrenkiella parvula HOM05D002639 ORTHO05D003094 3.1e-06 56.6 172 23.8
THA.LOC104827344 Tarenaya hassleriana HOM05D002639 ORTHO05D003094 3.1e-06 56.6 173 24.9
BcaB04g18335 Brassica carinata HOM05D002639 ORTHO05D003094 4.0e-06 56.2 205 23.9
GSVIVG01022680001 Vitis vinifera HOM05D010670 ORTHO05D013864 4.0e-06 56.2 155 23.2
PSO017G4448 Papaver somniferum HOM05D002639 ORTHO05D003094 6.9e-06 55.5 193 25.9
VMungo0331G0996 Vigna mungo HOM05D008141 ORTHO05D008631 6.9e-06 55.5 89 28.1
Actinidia00017 Actinidia chinensis HOM05D002639 ORTHO05D003094 9.0e-06 55.1 164 26.2
MSTRG.10098 Avicennia marina HOM05D002639 ORTHO05D003094 9.0e-06 55.1 189 26.5
DCAR_030525 Daucus carota HOM05D002639 ORTHO05D003094 9.0e-06 55.1 165 24.8
VMungo1127G1906 Vigna mungo HOM05D001068 ORTHO05D002190 9.0e-06 55.1 85 29.4
VMungo1309G0779 Vigna mungo HOM05D002639 ORTHO05D003094 9.0e-06 55.1 187 24.1


User provided reference genes

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