Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 0.0e+00 1332.0 675 100.0
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 0.0e+00 1230.7 684 92.8
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 0.0e+00 1078.2 688 82.7
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 3.0e-301 1038.1 687 81.1
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 1.2e-254 883.2 712 68.0
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 1.8e-253 879.4 691 70.2
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 1.6e-251 872.8 691 70.2
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 1.4e-239 833.2 710 65.9
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 5.9e-233 811.2 710 63.9
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 9.4e-231 803.9 713 63.8
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 8.2e-227 790.8 684 63.9
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 8.5e-224 780.8 693 64.6
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 4.7e-214 748.4 693 61.2
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 1.3e-211 740.3 691 60.8
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 4.0e-197 692.2 768 54.2
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 4.9e-195 685.3 613 62.2
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 3.2e-194 682.6 688 57.8
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 4.1e-194 682.2 688 57.6
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 5.2e-189 665.2 712 55.2
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 1.7e-187 660.2 702 55.7
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 4.1e-186 655.6 707 55.7
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 3.6e-182 642.5 711 53.9
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 6.2e-182 641.7 720 53.8
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 1.7e-179 633.6 708 53.8
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 6.4e-179 631.7 703 53.5
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 8.6e-176 621.3 694 53.7
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 7.3e-175 618.2 700 53.6
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 9.6e-175 617.8 702 53.1
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 8.1e-174 614.8 705 53.0
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 8.1e-174 614.8 699 53.5
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 1.1e-173 614.4 707 54.6
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 3.4e-172 609.4 705 52.3
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 4.9e-171 605.5 713 52.6
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 2.4e-170 603.2 707 53.0
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 3.0e-168 596.3 715 52.3
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 2.5e-167 593.2 709 52.8
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 3.3e-167 592.8 729 50.8
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 5.6e-167 592.0 704 52.3
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 9.6e-167 591.3 690 52.5
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.8e-166 589.0 697 52.2
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 6.2e-166 588.6 719 52.0
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 1.8e-165 587.0 710 50.8
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 1.8e-165 587.0 641 54.4
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 7.6e-164 581.6 708 52.0
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 7.6e-164 581.6 703 50.8
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 2.2e-163 580.1 708 50.1
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 2.9e-163 579.7 674 53.3
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 1.1e-162 577.8 712 50.6
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.2e-162 576.2 701 52.6
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 7.1e-162 575.1 713 50.4
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 6.0e-161 572.0 695 51.5
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 7.9e-161 571.6 674 51.9
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.3e-160 570.9 676 52.4
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 5.1e-160 568.9 705 50.4
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 4.9e-155 552.4 748 47.6
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 1.9e-154 550.4 715 49.9
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 2.4e-154 550.1 764 48.3
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 3.2e-154 549.7 709 49.2
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 1.3e-152 544.3 616 54.7
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.1e-152 542.3 716 50.7
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 1.9e-151 540.4 703 49.4
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.5e-151 540.0 709 49.9
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.3e-151 539.3 714 49.6
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 7.4e-151 538.5 669 51.0
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.3e-150 537.7 705 49.9
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 2.8e-150 536.6 718 48.2
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.5e-148 530.8 717 48.1
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 2.6e-148 530.0 820 45.0
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 7.6e-148 528.5 692 47.1
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.9e-147 526.6 701 50.1
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 4.9e-147 525.8 679 48.6
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 1.1e-146 524.6 638 51.7
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 3.7e-142 509.6 634 51.9
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 1.1e-141 508.1 725 47.7
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 5.5e-138 495.7 705 45.8
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 7.2e-138 495.4 767 44.9
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.3e-138 495.0 549 55.0
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 7.9e-137 491.9 699 45.9
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 2.3e-136 490.3 733 44.7
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 6.7e-136 488.8 693 48.9
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 2.4e-133 480.3 720 43.9
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.1e-133 479.9 700 45.6
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 6.9e-133 478.8 694 44.7
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.5e-132 477.6 707 46.4
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.1e-130 471.5 788 42.1
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 1.9e-130 470.7 698 46.1
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 2.5e-130 470.3 708 44.8
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 1.6e-129 467.6 704 45.7
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 3.6e-129 466.5 702 42.6
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 5.1e-128 462.6 720 45.1
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 6.7e-128 462.2 705 44.3
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 4.4e-127 459.5 722 43.2
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 4.4e-127 459.5 709 45.0
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 2.2e-126 457.2 711 44.7
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 4.8e-126 456.1 687 45.0
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 2.6e-124 450.3 711 44.6
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.9e-124 449.1 706 44.5
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 1.3e-123 448.0 683 43.8
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 6.5e-123 445.7 703 43.7
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 7.9e-121 438.7 776 41.8
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 8.8e-120 435.3 477 55.3
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 2.6e-119 433.7 698 44.4
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 5.7e-119 432.6 521 51.2
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 1.8e-117 427.6 705 42.0
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 5.0e-115 419.5 666 42.8
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 2.6e-111 407.1 661 42.4
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 3.3e-111 406.8 625 43.2
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 1.4e-109 401.4 658 42.1
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 4.1e-109 399.8 775 36.3
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 3.5e-108 396.7 682 41.8
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.0e-107 395.2 684 40.2
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 3.8e-107 393.3 664 41.0
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 6.5e-107 392.5 705 40.4
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 8.5e-107 392.1 662 41.2
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 8.5e-107 392.1 716 39.5
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 4.2e-106 389.8 673 41.3
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 1.6e-105 387.9 662 40.2
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 1.6e-105 387.9 702 41.0
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 1.0e-104 385.2 657 40.0
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 8.8e-104 382.1 744 38.0
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 1.5e-103 381.3 662 40.0
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 1.5e-103 381.3 635 40.9
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 2.0e-103 380.9 662 40.3
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 3.4e-103 380.2 660 40.2
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 4.4e-103 379.8 665 40.0
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 2.8e-102 377.1 657 39.9
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 6.3e-102 375.9 672 39.6
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 5.4e-101 372.9 654 39.9
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 1.6e-100 371.3 657 39.3
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 5.9e-100 369.4 567 45.3
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.0e-99 368.6 706 39.1
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 7.2e-98 362.5 294 64.6
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 9.5e-98 362.1 421 50.4
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 8.8e-96 355.5 620 40.6
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 2.0e-95 354.4 699 38.6
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.6e-95 354.0 716 38.8
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 2.8e-94 350.5 672 38.1
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 6.6e-91 339.3 689 37.3
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 1.0e-88 332.0 307 58.3
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.8e-85 321.2 276 65.6
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 9.5e-82 308.9 370 48.6
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 5.2e-80 303.1 615 40.2
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.6e-79 300.8 294 57.1
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.7e-78 298.1 706 35.8
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 6.0e-76 289.7 568 38.2
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 5.0e-75 286.6 566 38.3
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.9e-74 284.6 440 44.3
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 7.3e-74 282.7 253 60.9
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 7.3e-74 282.7 279 56.6
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 2.0e-71 274.6 429 42.2
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 1.1e-69 268.9 294 52.4
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 7.6e-63 246.1 261 51.0
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.4e-61 241.1 332 45.5
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 9.2e-61 239.2 235 54.0
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 2.3e-51 208.0 429 36.8
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 9.0e-48 196.1 139 69.1
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 7.6e-47 193.0 144 72.9
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.4e-40 171.4 187 57.2
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 4.5e-39 167.2 207 47.3
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.3e-35 155.6 241 40.7
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 1.8e-35 155.2 149 56.4
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 4.3e-34 150.6 165 60.0
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.2e-28 132.5 207 42.0
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 5.1e-27 127.1 238 37.4
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 2.8e-25 121.3 438 31.5
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 4.8e-25 120.6 183 44.8
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 3.8e-22 110.9 457 31.5
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 3.6e-20 104.4 735 27.8
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.2e-14 85.1 63 68.3
Rhsim05G0045800 Rhododendron simsii HOM05D003626 ORTHO05D004255 3.8e-14 84.3 337 32.0
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 5.5e-13 80.5 87 52.9
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 9.4e-13 79.7 67 55.2
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 7.9e-12 76.6 43 81.4
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.3e-09 69.3 100 42.0
SHI13766 Sapria himalayana HOM05D003626 ORTHO05D004255 8.2e-09 66.6 189 32.8
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 9.1e-08 63.2 60 48.3
HPP92_027487 Vanilla planifolia HOM05D003626 ORTHO05D004255 7.7e-07 60.1 56 66.1
HPP92_001477 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.0e-06 59.7 58 51.7
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 1.7e-06 58.9 156 32.7


User provided reference genes

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